BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027986
         (516 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc...    79   7e-15
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc...    79   2e-14
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc...    79   3e-14
ref|XP_002266041.1| PREDICTED: uncharacterized protein LOC100265...    83   4e-14
gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc...    78   9e-14
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]    82   1e-13
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]    80   2e-13
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]          75   3e-13
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]            75   3e-13
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]    79   5e-13
gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Jap...    76   7e-13
emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group]         74   7e-13
gb|AAL31659.1|AC079179_14 Putative polyprotein [Oryza sativa] gi...    68   8e-13
gb|ABA93581.1| retrotransposon protein, putative, unclassified [...    65   8e-13
gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]            76   2e-12
emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera]    74   2e-12
gb|AAX96265.1| retrotransposon protein, putative, Ty3-gypsy sub-...    68   3e-12
gb|AAT81704.1| putative retrotransposon protein [Oryza sativa Ja...    71   4e-12
gb|AAX96182.1| retrotransposon protein, putative, unclassified [...    65   4e-12
gb|EMJ26136.1| hypothetical protein PRUPE_ppa021588mg [Prunus pe...    76   4e-12

>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1470

 Score = 79.3 bits (194), Expect(2) = 7e-15
 Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
 Frame = -1

Query: 516 AEFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTR 337
           A F E ++P  V   +++EF RLRQGN TV +Y ++F +L++YA+G ++ EE+K+ KF  
Sbjct: 126 AAFRENFVPTAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDKFIE 185

Query: 336 GLKLELQKQLLTVELTTYSAAVKAALRIESGL-----NRIGQIQQSRPSNSLKRTAVG-Q 175
           GL  EL+  ++  +  ++ + +   +R+E+       NR  ++  SRP  ++ +   G  
Sbjct: 186 GLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMSRPPQTMPQRLKGAT 245

Query: 174 PS--KPPAKFQKGP 139
           PS  KPP      P
Sbjct: 246 PSGWKPPVMVTNRP 259



 Score = 26.6 bits (57), Expect(2) = 7e-15
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           C +C K GH AN+C   +   +R G+N
Sbjct: 291 CFNCGKYGHYANNCPHPRKTPVRTGAN 317


>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1710

 Score = 79.3 bits (194), Expect(2) = 2e-14
 Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
 Frame = -1

Query: 516 AEFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTR 337
           A F E ++P  V   +++EF RLRQGN TV +Y ++F +L++YA+G ++ EE+K+ KF  
Sbjct: 504 AAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDKFIE 563

Query: 336 GLKLELQKQLLTVELTTYSAAVKAALRIESGL-----NRIGQIQQSRPSNSLKRTAVGQP 172
           GL  EL+  ++  +  ++ + +   +R+E+       NR  ++  S P  ++ +   G P
Sbjct: 564 GLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMSHPPQTVPQRLKGAP 623

Query: 171 S---KPPAKFQKGP 139
               KPP      P
Sbjct: 624 PSGWKPPVMVTNRP 637



 Score = 25.0 bits (53), Expect(2) = 2e-14
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           C +C + GH AN+C   +   +R G+N
Sbjct: 669 CFNCGEYGHYANNCPHPRKTPVRTGAN 695


>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1712

 Score = 78.6 bits (192), Expect(2) = 3e-14
 Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
 Frame = -1

Query: 516 AEFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTR 337
           A F E ++P  V   +++EF RLRQGN TV +Y ++F +L++YA+G ++ EE+K+ KF  
Sbjct: 467 AAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDKFIE 526

Query: 336 GLKLELQKQLLTVELTTYSAAVKAALRIESGL-----NRIGQIQQSRPSNSLKRTAVG-Q 175
           GL  EL+  ++  +  ++ + +   +R+E+       NR  ++  SRP  ++ +   G  
Sbjct: 527 GLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMSRPPQTVPQRLKGAT 586

Query: 174 PS--KPPAKFQKGP 139
           PS  KPP      P
Sbjct: 587 PSGWKPPVVVTNRP 600



 Score = 25.0 bits (53), Expect(2) = 3e-14
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           C +C + GH AN+C   +   +R G+N
Sbjct: 632 CFNCGEYGHYANNCPHPRKTPVRTGAN 658


>ref|XP_002266041.1| PREDICTED: uncharacterized protein LOC100265452 [Vitis vinifera]
          Length = 429

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F  +Y  +V K+A+R EF  L QG ++V +YES F  LS++ALG IS E +K  +F +GL
Sbjct: 152 FLGKYFGEVAKDAKRMEFEHLIQGTMSVLEYESCFSELSRFALGMISEEGEKTRRFQQGL 211

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQ--------SRPSNSLKRTAVGQ 175
           +  ++ +L+ + +  YS  VK AL +E  +    QIQ+         R   S +  + G 
Sbjct: 212 RPAIRNRLVPLAIRDYSELVKRALLVEQDIEETNQIQEQKGDRKGKQRIGESSQGRSQGS 271

Query: 174 PSKPPAKFQKGPVNKTDKGKETSTRKAGSSVC 79
             +   +  KG  +   +G++++ R A + VC
Sbjct: 272 QQRQRTQQSKGHFSFYARGEQSAKRVATNRVC 303


>gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1226

 Score = 77.8 bits (190), Expect(2) = 9e-14
 Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
 Frame = -1

Query: 516 AEFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTR 337
           A F E ++P  V   +++EF RLRQGN TV +Y + F +L++YA+G ++ EE+K+ KF  
Sbjct: 126 AAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYAIGDLANEEEKIDKFIE 185

Query: 336 GLKLELQKQLLTVELTTYSAAVKAALRIESGL-----NRIGQIQQSRPSNSLKRTAVGQP 172
           GL  EL+  ++  +  ++ + +   +R+E+       NR  ++  +RP   + +   G  
Sbjct: 186 GLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMNRPPQGVPQRLKGAT 245

Query: 171 S---KPP 160
           S   KPP
Sbjct: 246 SSGWKPP 252



 Score = 24.3 bits (51), Expect(2) = 9e-14
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           C +C++ GH AN+C   +   +R  +N
Sbjct: 291 CFNCEEYGHYANNCPHPRKTPVRTSAN 317


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 49/150 (32%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F  +Y  +V K A+R EF  L QG ++V +YES F  LS++ALG IS E +K  +F +GL
Sbjct: 130 FLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRFALGMISEEGEKARRFQQGL 189

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQPSKPP--- 160
           +  ++ +L+ + +  YS  VK AL +E  ++   QI++ +     K+  +G+ S+ P   
Sbjct: 190 RPAIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREKKRDRKGKQ-RMGESSQGPQQR 248

Query: 159 ---AKFQKGPVNKTDKGKETSTRKAGSSVC 79
               +F++ P +   +G + + R A + VC
Sbjct: 249 QRTQQFERRP-SFYAEGGQIAQRAAANRVC 277


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/122 (35%), Positives = 73/122 (59%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F  +Y  +V K A+R EF  L QG ++V +YES F  LS++ALG IS E +K  +F +GL
Sbjct: 195 FLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRFALGMISEEGEKARRFQQGL 254

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQPSKPPAKF 151
           +  ++ +L+ + +  YS  VK AL +E  ++   QI++ +     K+  +G+ S+ P + 
Sbjct: 255 RPAIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREQKGDRKGKQ-RMGESSQGPQQR 313

Query: 150 QK 145
           Q+
Sbjct: 314 QR 315


>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
          Length = 1470

 Score = 75.1 bits (183), Expect(2) = 3e-13
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F E ++P  V   +++EF RLRQGN TV +Y ++F +L++YA+G ++ EE+K+ KF  GL
Sbjct: 128 FRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDKFIEGL 187

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGL-----NRIGQIQQSR-PSNSLKRTAVGQPS 169
             EL+  ++  +  ++ + +   +R+E+       NR  ++  SR P    +R     PS
Sbjct: 188 NDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMSRLPQTVPQRLKGATPS 247

Query: 168 --KPPAKFQKGP 139
             KPP      P
Sbjct: 248 GWKPPVMVTNRP 259



 Score = 25.4 bits (54), Expect(2) = 3e-13
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           C +C + GH AN+C   +   +R G+N
Sbjct: 291 CFNCGEYGHYANNCPHPRKTPIRTGAN 317


>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
          Length = 1470

 Score = 75.1 bits (183), Expect(2) = 3e-13
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F E ++P  V   +++EF RLRQGN TV +Y ++F +L++YA+G ++ EE+K+ KF  GL
Sbjct: 128 FRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDKFIEGL 187

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGL-----NRIGQIQQSR-PSNSLKRTAVGQPS 169
             EL+  ++  +  ++ + +   +R+E+       NR  ++  SR P    +R     PS
Sbjct: 188 NDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMSRLPQTVPQRLKGATPS 247

Query: 168 --KPPAKFQKGP 139
             KPP      P
Sbjct: 248 GWKPPVMVTNRP 259



 Score = 25.4 bits (54), Expect(2) = 3e-13
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           C +C + GH AN+C   +   +R G+N
Sbjct: 291 CFNCGEYGHYANNCPHPRKTPIRTGAN 317


>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 49/150 (32%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F  +Y  +V K A+R EF  L QG + V +YES F  LS++ALG IS E +K  +F +GL
Sbjct: 285 FLGKYFGEVAKHAKRMEFEHLIQGTMLVLEYESRFSELSRFALGMISEEGEKARRFQQGL 344

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQPSKPP--- 160
           +  ++ +L+ + +  YS  VK AL +E  ++   QI++ +     K+  +G+ S+ P   
Sbjct: 345 RPIIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREQKGDKKGKQ-RMGESSQGPQQR 403

Query: 159 ---AKFQKGPVNKTDKGKETSTRKAGSSVC 79
               +F++ P     +G + + R A + VC
Sbjct: 404 QRTQQFERRPSFYAGEG-QIAQRAATNRVC 432


>gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Japonica Group]
           gi|22725924|gb|AAN04934.1| Putative polyprotein [Oryza
           sativa Japonica Group] gi|31430228|gb|AAP52174.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1569

 Score = 75.9 bits (185), Expect(2) = 7e-13
 Identities = 40/140 (28%), Positives = 76/140 (54%)
 Frame = -1

Query: 516 AEFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTR 337
           A F+E ++P  V   +++EF RL+QGN TV +Y + F +L++YA+G ++ EE+K+ KF  
Sbjct: 337 AAFHENFVPAAVMRMKKNEFRRLQQGNTTVQEYLNRFTQLARYAIGDLANEEEKIDKFIE 396

Query: 336 GLKLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQPSKPPA 157
           GL  EL+  ++  +  ++ + +   +R+E+    +G        N  +R A+  P +   
Sbjct: 397 GLNDELRGPMIGQDHESFRSLINKVVRLENDQRTVGH-------NRKRRLAMNCPPQGVP 449

Query: 156 KFQKGPVNKTDKGKETSTRK 97
           +  KG  +   K    +T +
Sbjct: 450 QRHKGATSSGWKPPIVATNR 469



 Score = 23.1 bits (48), Expect(2) = 7e-13
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 83  CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           C +C + GH AN+C   +   +  G+N
Sbjct: 502 CFNCGEYGHYANNCPHPRKTPVHTGAN 528


>emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group]
          Length = 1402

 Score = 73.9 bits (180), Expect(2) = 7e-13
 Identities = 39/140 (27%), Positives = 75/140 (53%)
 Frame = -1

Query: 516 AEFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTR 337
           A F+E ++P  V   +++EF R RQGN TV +Y + F +L++YA+G ++ EE+K+ KF  
Sbjct: 61  AAFHENFVPAAVMRMKKNEFRRPRQGNTTVQEYLNRFTQLTRYAIGDLADEEEKIDKFIE 120

Query: 336 GLKLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQPSKPPA 157
           GL  EL+  ++  +  ++ + +   +R+E+    +         N  +R A+ +P +   
Sbjct: 121 GLNDELRGPMIGQDHESFQSLINKVVRLENDRKVV-------EHNRKRRLAMNRPPQVAT 173

Query: 156 KFQKGPVNKTDKGKETSTRK 97
           +  KG  +   K    +T +
Sbjct: 174 QHPKGATSSGWKPTVVTTNR 193



 Score = 25.0 bits (53), Expect(2) = 7e-13
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 98  KPGQVCAHCQKPGHTANDCWRKQGRCLRCGSN 3
           +PG  C +C + GH AN C       +R G+N
Sbjct: 222 RPGS-CFNCGEYGHFANKCPHLNKTPIRTGAN 252


>gb|AAL31659.1|AC079179_14 Putative polyprotein [Oryza sativa]
           gi|20042885|gb|AAM08713.1|AC116601_6 Putative
           polyprotein [Oryza sativa Japonica Group]
           gi|31429918|gb|AAP51902.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 371

 Score = 67.8 bits (164), Expect(2) = 8e-13
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F + +IP  V   ++ EF  L+Q + TVA+Y  EF+RL++YA   + T+E++  KF  GL
Sbjct: 135 FEKTHIPTGVVSLKKREFRALKQRDHTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGL 194

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRI----------------GQIQQSRPSNS 199
           K EL   L++ +   +   V  A+R+E   NR+                 Q Q+ +P   
Sbjct: 195 KDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMDNRKRKMTVFQEAQGSSQRQRIKPLQI 254

Query: 198 LKRTAVGQPSKPPAKFQKGPVNKTDKGKETSTRKAGSSV 82
            +  + GQ    P        +KT++  E +  +A   V
Sbjct: 255 GESFSTGQGQSQPLNIGGEIKSKTNESNEVNIEQANQPV 293



 Score = 31.2 bits (69), Expect(2) = 8e-13
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 101 GKPGQVCAHCQKPGHTANDC 42
           G+  QVC +C KPGH A +C
Sbjct: 307 GREQQVCFNCYKPGHFAREC 326


>gb|ABA93581.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 331

 Score = 65.1 bits (157), Expect(2) = 8e-13
 Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           FN+ +IP  V   ++ EF  L+Q + TVA+Y  EF+R ++YA   + T++++  KF  GL
Sbjct: 97  FNKTHIPAGVVALKKREFRALKQKDHTVAEYLHEFNRPARYAPEDVCTDKERQEKFLEGL 156

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIG----------QIQQSRPSNSLKRTAV 181
           K EL   L++ +   +   V  A+R+E   NR+           + Q S     +K   +
Sbjct: 157 KDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMDNCKRKMTVFQEAQGSSQRQRIKPLQI 216

Query: 180 GQPS 169
           G+PS
Sbjct: 217 GEPS 220



 Score = 33.9 bits (76), Expect(2) = 8e-13
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 167 NRLLSFRRDQLTKQIKEKRPVQGKPGQVCAHCQKPGHTANDC 42
           N+L+  ++DQ      ++    G+  QVC +C KPGH A +C
Sbjct: 252 NQLVEVQQDQ-----SQENNSSGREQQVCFNCYKPGHFAREC 288


>gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]
          Length = 1486

 Score = 75.9 bits (185), Expect(2) = 2e-12
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
 Frame = -1

Query: 513 EFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRG 334
           +F   YIP    E  R++F RL+QGN +V +Y  EFH L++YAL  +  ++ K+Y+F  G
Sbjct: 154 DFRSHYIPSSFVEEMREKFRRLKQGNNSVYKYNVEFHELARYALQDVPDQKSKIYQFRGG 213

Query: 333 LKLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQ------- 175
           LK +LQ  L   +   +      ALR E+ L R+   ++    +S   T V Q       
Sbjct: 214 LKEDLQLALALHDPEEFDKFYNLALRAEAALLRVENSKKRFRDSSSSSTQVVQKQQRFWV 273

Query: 174 PSKPPAKFQKGPVNKTDKG 118
            S PP +  + P +   +G
Sbjct: 274 SSPPPPRHSQQPKHSGGRG 292



 Score = 21.6 bits (44), Expect(2) = 2e-12
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = -2

Query: 98  KPGQVCAH-CQKPGHTANDC 42
           +P  V  H C + GH AN C
Sbjct: 319 QPADVTCHKCGQKGHYANKC 338


>emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera]
          Length = 279

 Score = 73.9 bits (180), Expect(2) = 2e-12
 Identities = 46/144 (31%), Positives = 75/144 (52%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F ++Y+P  V+  +  EF RL QG++TVAQYE++F  LS++A   I+ EE K  KF  GL
Sbjct: 55  FYKKYLPDNVRRQKVGEFVRLEQGDITVAQYEAKFTELSRFARQLIAIEEKKTLKFQDGL 114

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQPSKPPAKF 151
           K  L+ ++  ++L  YS  V  AL  E     + Q ++ +  +S  ++     ++ P +F
Sbjct: 115 KPYLKNKISILKLNVYSGVVDRALIAEKDNKELQQYREQQRKSS--KSDGAHDNQEPKRF 172

Query: 150 QKGPVNKTDKGKETSTRKAGSSVC 79
               V    KG+         S+C
Sbjct: 173 SS--VESHIKGEVVQNLDVTCSIC 194



 Score = 23.5 bits (49), Expect(2) = 2e-12
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 98  KPGQVCAHCQKPGHTANDC 42
           K  + C  C K GH   DC
Sbjct: 205 KESEACFDCGKHGHIIRDC 223


>gb|AAX96265.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550571|gb|ABA93368.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1333

 Score = 67.8 bits (164), Expect(2) = 3e-12
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           FN+  +P+ +   ++ EFH L+QG  TV +Y  EF+RL++YA   + T+ ++  KF  GL
Sbjct: 149 FNKAQVPEGIVAQKKREFHSLQQGTRTVIEYLQEFNRLARYAPEDVRTDAERQEKFMSGL 208

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVG--QPSKPPA 157
             EL  QL++ +   +   V  A+R E   N++ + +++    +  RT  G  Q  +P  
Sbjct: 209 DDELTNQLISRDYEDFEKLVDKAIRQEEQCNKMNRKRKA----AQFRTPQGKNQKLRPTM 264

Query: 156 KFQKGP 139
           + Q GP
Sbjct: 265 RHQGGP 270



 Score = 29.3 bits (64), Expect(2) = 3e-12
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 161 LLSFRRDQLTKQIKEKRPVQ-GKPGQVCAHCQKPGHTANDC 42
           ++  + DQ  +    ++P + G+  ++C +C KPGHT   C
Sbjct: 306 MIPAQSDQPAQPALPEQPKRLGEKPELCFNCNKPGHTVGKC 346


>gb|AAT81704.1| putative retrotransposon protein [Oryza sativa Japonica Group]
           gi|108709812|gb|ABF97607.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 626

 Score = 68.9 bits (167), Expect(2) = 4e-12
 Identities = 34/123 (27%), Positives = 68/123 (55%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F + ++P  V   +++EF R+RQGN T+ +Y + F +L++YA G ++ EE+K+ KF  GL
Sbjct: 128 FRDNFMPAAVMRMKKNEFRRVRQGNTTIQEYLNRFTQLARYATGDLADEEEKIDKFIEGL 187

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRTAVGQPSKPPAKF 151
             EL+  ++  +  ++ + +   +R+E+    +         N  +R A+ +P +   + 
Sbjct: 188 NDELRGPMIGQDHDSFQSLINKVVRLENDRKVV-------EHNRKRRLAMNRPPQVAPQC 240

Query: 150 QKG 142
            KG
Sbjct: 241 PKG 243



 Score = 27.7 bits (60), Expect(2) = 4e-12
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = -2

Query: 137 LTKQIKEKRPVQGKPGQV----CAHCQKPGHTANDCWRKQGRCLRCGSN 3
           +T Q +   P Q   G V    C +C + GH AN C       +R G+N
Sbjct: 269 VTTQTQAPTPNQAATGSVRPGSCFNCGEYGHFANKCPHPNKTPIRTGAN 317



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           FN+ +IP  V   ++ EF  L+Q + TVA+Y  EF+RL++YA   + T+E++  KF  GL
Sbjct: 392 FNKTHIPAGVVALKKREFRTLKQKDRTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGL 451

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIG----------QIQQSRPSNSLKRTAV 181
           K EL   L++ +   +   V  A+R+E   NRI           + Q S     +K   +
Sbjct: 452 KDELSVTLISHDYVDFQQLVDKAIRLEDKKNRIDNRKRKMTVFQEAQGSSQRQRIKPLQI 511

Query: 180 GQPS 169
           G+PS
Sbjct: 512 GEPS 515


>gb|AAX96182.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77550619|gb|ABA93416.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 371

 Score = 65.5 bits (158), Expect(2) = 4e-12
 Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
 Frame = -1

Query: 510 FNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTRGL 331
           F + +IP  V   ++ EF  L+Q + TVA+Y  EF+RL++YA   + T+E++  KF  GL
Sbjct: 135 FKKTHIPVGVVALKKREFRALKQKDHTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGL 194

Query: 330 KLELQKQLLTVELTTYSAAVKAALRIESGLNRIG----------QIQQSRPSNSLKRTAV 181
           K EL   L++ +   +   V  A+R+E   NR+           + Q S     +K   +
Sbjct: 195 KDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMDNRKRKMTVFQEAQGSSQRQRIKPLQI 254

Query: 180 GQPSKPPAKFQKGPVN-------KTDKGKETSTRKAGSSV 82
           G+ S P    Q   +N       +T++ KE +  +A   V
Sbjct: 255 GE-SFPAGPGQSQQLNIGGEIKLETNESKEVNIEQANQPV 293



 Score = 31.2 bits (69), Expect(2) = 4e-12
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 101 GKPGQVCAHCQKPGHTANDC 42
           G+  QVC +C KPGH A +C
Sbjct: 307 GREQQVCFNCYKPGHFAREC 326


>gb|EMJ26136.1| hypothetical protein PRUPE_ppa021588mg [Prunus persica]
          Length = 392

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = -1

Query: 516 AEFNEQYIPQVVKEARRDEFHRLRQGNLTVAQYESEFHRLSKYALGTISTEEDKLYKFTR 337
           A F+ QY PQ  +  +  EF +L QG +TV +YE  FH LSKY L  +  E  K   FT 
Sbjct: 112 AAFDSQYYPQAYQNLKMQEFLQLEQGMMTVLEYEKRFHDLSKYCLPLVEDESKKCQLFTM 171

Query: 336 GLKLELQKQLLTVELTTYSAAVKAALRIESGLNRIGQIQQSRPSNSLKRT--AVGQPSKP 163
           GLK  ++  +++  LT +S  V +A  IES          +RP   L+R    +G PS+ 
Sbjct: 172 GLKASIRDIVISQRLTNFSDVVMSASLIESSQ------MMARPRGELRRQHFEIGGPSQG 225

Query: 162 PAK 154
            +K
Sbjct: 226 SSK 228