BLASTX nr result
ID: Rehmannia24_contig00027947
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00027947
(347 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina] 68 1e-09
ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-... 64 2e-08
emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera] 64 2e-08
gb|EMJ24906.1| hypothetical protein PRUPE_ppa013029mg [Prunus pe... 63 3e-08
gb|EOY00652.1| RING/U-box superfamily protein [Theobroma cacao] 62 8e-08
gb|EOY00651.1| Uncharacterized protein TCM_010558 [Theobroma cacao] 62 8e-08
ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF18... 59 7e-07
gb|EXB82546.1| E3 ubiquitin-protein ligase RHA2A [Morus notabilis] 58 1e-06
ref|XP_004299221.1| PREDICTED: RING finger protein 150-like [Fra... 58 1e-06
ref|XP_006483954.1| PREDICTED: uncharacterized RING finger prote... 57 2e-06
ref|XP_006438251.1| hypothetical protein CICLE_v10032987mg [Citr... 57 2e-06
ref|XP_002893439.1| F21J9.24 [Arabidopsis lyrata subsp. lyrata] ... 57 2e-06
ref|XP_002530038.1| protein binding protein, putative [Ricinus c... 57 2e-06
gb|AAF97967.1|AC000103_17 F21J9.24 [Arabidopsis thaliana] 57 3e-06
ref|XP_004135490.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 57 3e-06
ref|XP_002314594.1| zinc finger family protein [Populus trichoca... 57 3e-06
ref|XP_006852368.1| hypothetical protein AMTR_s00049p00223430 [A... 55 1e-05
>gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina]
Length = 150
Score = 67.8 bits (164), Expect = 1e-09
Identities = 42/67 (62%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQVXXXXXXXXXXXXE------YSG 326
MGLSNF SP EGVL LLVMNTVMSVA+VKNKLRSVLQV E SG
Sbjct: 1 MGLSNFSSPAEGVLHLLVMNTVMSVAIVKNKLRSVLQVVGAGGGDSDQEFEEEYGEDESG 60
Query: 327 DSRERRV 347
SR RRV
Sbjct: 61 GSRTRRV 67
>ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera]
gi|296081356|emb|CBI16789.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNF SP EGVLP+LVMNTVMSVAL+KN +RSVLQV
Sbjct: 1 MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQV 38
>emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera]
Length = 718
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNF SP EGVLP+LVMNTVMSVAL+KN +RSVLQV
Sbjct: 469 MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQV 506
>gb|EMJ24906.1| hypothetical protein PRUPE_ppa013029mg [Prunus persica]
Length = 143
Score = 63.2 bits (152), Expect = 3e-08
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNFPS EGVLP+LVMNTV+SVAL+KN +RSVLQV
Sbjct: 1 MGLSNFPSAAEGVLPVLVMNTVLSVALLKNMVRSVLQV 38
>gb|EOY00652.1| RING/U-box superfamily protein [Theobroma cacao]
Length = 138
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNFPS EGVLP+LVMNTV+SVAL+KN +RS+LQV
Sbjct: 1 MGLSNFPSAAEGVLPVLVMNTVLSVALLKNMVRSLLQV 38
>gb|EOY00651.1| Uncharacterized protein TCM_010558 [Theobroma cacao]
Length = 164
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNFPS EGVLP+LVMNTV+SVAL+KN +RS+LQV
Sbjct: 1 MGLSNFPSAAEGVLPVLVMNTVLSVALLKNMVRSLLQV 38
>ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
Length = 134
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNFPS EGVLP+LV+NTV+SVA++KN RS+LQV
Sbjct: 1 MGLSNFPSASEGVLPVLVINTVLSVAVLKNMFRSMLQV 38
>gb|EXB82546.1| E3 ubiquitin-protein ligase RHA2A [Morus notabilis]
Length = 167
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNFP+ EGVLP+LVMN+V+SV L+KN +RSV+QV
Sbjct: 1 MGLSNFPTAAEGVLPVLVMNSVLSVTLLKNMVRSVIQV 38
>ref|XP_004299221.1| PREDICTED: RING finger protein 150-like [Fragaria vesca subsp.
vesca]
Length = 138
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLSNFP EGVLP+LVMNTV+SVAL+K+ +RSV QV
Sbjct: 1 MGLSNFPGTSEGVLPVLVMNTVLSVALLKSMVRSVFQV 38
>ref|XP_006483954.1| PREDICTED: uncharacterized RING finger protein C4G3.12c-like
[Citrus sinensis]
Length = 152
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQ 275
MGLSNFPS EG+LP LVMNTV+SVAL+KN +RS+LQ
Sbjct: 1 MGLSNFPSAAEGLLPGLVMNTVLSVALLKNMVRSLLQ 37
>ref|XP_006438251.1| hypothetical protein CICLE_v10032987mg [Citrus clementina]
gi|557540447|gb|ESR51491.1| hypothetical protein
CICLE_v10032987mg [Citrus clementina]
Length = 152
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQ 275
MGLSNFPS EG+LP LVMNTV+SVAL+KN +RS+LQ
Sbjct: 1 MGLSNFPSAAEGLLPGLVMNTVLSVALLKNMVRSLLQ 37
>ref|XP_002893439.1| F21J9.24 [Arabidopsis lyrata subsp. lyrata]
gi|297339281|gb|EFH69698.1| F21J9.24 [Arabidopsis lyrata
subsp. lyrata]
Length = 136
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLS+FP+ EGVLPLLVMNTV+SV L+KN +RSV Q+
Sbjct: 1 MGLSHFPTASEGVLPLLVMNTVVSVTLLKNMVRSVFQI 38
>ref|XP_002530038.1| protein binding protein, putative [Ricinus communis]
gi|223530454|gb|EEF32338.1| protein binding protein,
putative [Ricinus communis]
Length = 139
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLS+FPS EGVLP+LVMNTV+SVAL KN +R++LQV
Sbjct: 1 MGLSSFPSAAEGVLPVLVMNTVLSVALFKNWVRALLQV 38
>gb|AAF97967.1|AC000103_17 F21J9.24 [Arabidopsis thaliana]
Length = 131
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLS+FP+ EGVLPLLVMNTV+S+ L+KN +RSV Q+
Sbjct: 1 MGLSHFPTASEGVLPLLVMNTVVSITLLKNMVRSVFQI 38
>ref|XP_004135490.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Cucumis sativus]
gi|449518455|ref|XP_004166257.1| PREDICTED: E3
ubiquitin-protein ligase RHA2A-like [Cucumis sativus]
Length = 138
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = +3
Query: 165 MGLSNFPSPGEGVL--PLLVMNTVMSVALVKNKLRSVLQVXXXXXXXXXXXXEYSGDS-R 335
MGLSNFP EGVL P+LVMNTVMS+A +KN +RSV+Q+ EY ++ R
Sbjct: 1 MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60
Query: 336 ERRV 347
ERR+
Sbjct: 61 ERRI 64
>ref|XP_002314594.1| zinc finger family protein [Populus trichocarpa]
gi|222863634|gb|EEF00765.1| zinc finger family protein
[Populus trichocarpa]
Length = 133
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQV 278
MGLS+FP EGVLP+LVMNTV+SVAL+K+ +RSVLQ+
Sbjct: 1 MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQL 38
>ref|XP_006852368.1| hypothetical protein AMTR_s00049p00223430 [Amborella trichopoda]
gi|548855972|gb|ERN13835.1| hypothetical protein
AMTR_s00049p00223430 [Amborella trichopoda]
Length = 146
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +3
Query: 165 MGLSNFPSPGEGVLPLLVMNTVMSVALVKNKLRSVLQ 275
MGLS+FP+ EGVLP+L+MNT +S+ALVK+ LRSVLQ
Sbjct: 1 MGLSSFPTASEGVLPVLLMNTFLSIALVKDLLRSVLQ 37