BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027905
         (1062 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...   219   1e-54
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   207   4e-51
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   196   2e-47
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668...   179   1e-42
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   179   2e-42
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   165   3e-38
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...   152   2e-34
ref|XP_002331075.1| predicted protein [Populus trichocarpa]           152   2e-34
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   152   3e-34
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             150   1e-33
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   145   2e-32
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...   145   3e-32
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   142   2e-31
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   135   3e-29
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...   127   1e-26
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   120   7e-25
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   120   7e-25
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A...   120   1e-24
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   118   3e-24
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   118   5e-24

>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score =  219 bits (558), Expect = 1e-54
 Identities = 109/269 (40%), Positives = 155/269 (57%), Gaps = 5/269 (1%)
 Frame = +3

Query: 48  WSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGS-----VNPS 212
           WS  +LSYAG+ EL+R+V+QG+  FW+SI P+P  V   II+ CR+FLWG      + P 
Sbjct: 111 WSRKSLSYAGKVELIRAVIQGIANFWMSIFPLPQSVLDTIIATCRNFLWGKADGGKIKPL 170

Query: 213 VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLRGRNIWDW 392
           VAWS +C PK EGGLGL + + WN ALL+  LW++   KD+LW + +H  Y +G N+WD+
Sbjct: 171 VAWSEVCTPKKEGGLGLFNLKDWNIALLSCILWDLHSKKDSLWVRLVHHYYFKGGNVWDF 230

Query: 393 ELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYNFFRPHQPEV 572
                DS        IRDII+ K  + E A  +L SW  N +       Y++ R  +P V
Sbjct: 231 ISSSSDSVFI----HIRDIIISKEENIEVAKLMLNSWGCNEQTLA-GKMYDYIRGTRPVV 285

Query: 573 PWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDVDKLCVFCGTKPETCQHLYFECA 752
            WS++IW+  I  K SF LWL  ++R+   DR  +++   LC  C  + E+  HL+F C 
Sbjct: 286 HWSSIIWNPVIPSKMSFILWLATKNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFFSCR 345

Query: 753 FTRAVWTGIRGWIGIDRQMTTFSSAIKWL 839
            +  VW  IR WI + RQ  +   +I  L
Sbjct: 346 TSLRVWAHIRDWIPLKRQSISLQHSISAL 374


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  207 bits (528), Expect = 4e-51
 Identities = 106/341 (31%), Positives = 177/341 (51%), Gaps = 7/341 (2%)
 Frame = +3

Query: 3    YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
            +Y+ L+ KI   +  WSA  LSYAGR +L++SV+     FW+  LP+P  V  +I +ICR
Sbjct: 598  HYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICR 657

Query: 183  SFLW-GSVNPS----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYK 347
            SFLW G+ N S    +AW  +C PK  GGL + +   WN   + K LWN+    D LW K
Sbjct: 658  SFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIK 717

Query: 348  WIHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKG 527
            W+H  Y+RG++IW   L++  S +  ++  +R +++Q     +   ++            
Sbjct: 718  WLHTYYIRGQSIWSMVLKKSHSWIMSSMMKLRPLLLQYQSRMQDVFKM------------ 765

Query: 528  PNNPYNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI--RWMDVDKLCV 701
                Y        ++ W  ++ ++   P+  F LW     R+ ++DR+    ++VD  C 
Sbjct: 766  -KKIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCA 824

Query: 702  FCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQ 881
            FC +  E+ +HL+F C   + +WT +  W+ I    +T+S  + W+ ++ KG  W +   
Sbjct: 825  FCSSM-ESHEHLFFGCIELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGKGWRAMLL 883

Query: 882  KIAFATTVYQLWNARNRLIFEGEVSHIDLVIHKIKTHVYKV 1004
            K AF  T+Y +W  RN  +F G V++  +    I T +Y+V
Sbjct: 884  KCAFTETIYHIWAYRNHRVFGGNVNNRKVEDSIINTIIYRV 924


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  196 bits (497), Expect = 2e-47
 Identities = 113/337 (33%), Positives = 171/337 (50%), Gaps = 10/337 (2%)
 Frame = +3

Query: 3    YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
            +Y  L+ KI   +  W+A  LSYAGR +LV SV+  +  +WL+  P P  V  KI +ICR
Sbjct: 156  HYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICR 215

Query: 183  SFLW-----GSVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYK 347
             FLW     GS    VAW  +C P+S GGL + D   WN A L K LWN+   +D+LW K
Sbjct: 216  IFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVK 275

Query: 348  WIHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKG 527
            WI   Y++   +   E++  DS + K +   R+ + +K  + E              ++G
Sbjct: 276  WIQAYYVKRSELMHIEMKNTDSWIMKAILKQREDL-EKIDNMEEL-----------MIRG 323

Query: 528  PNNPYNFFRPHQ---PEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI--RWMDVDK 692
              N    +R  Q       W N+++ +   P+ +F LWL    R+ T+DR+    M  DK
Sbjct: 324  SINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDK 383

Query: 693  LCVFCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHS 872
             C FC ++ E+  HL+F C  ++ VW  +  W+ I    + + + + WL    KG    +
Sbjct: 384  SCCFC-SEEESMNHLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGTRA 442

Query: 873  RGQKIAFATTVYQLWNARNRLIFEGEVSHIDLVIHKI 983
               K+A A T+Y++WN RN  IF G+   I+ V  KI
Sbjct: 443  AVLKMAIAETIYEIWNIRNNKIF-GQAIDINTVGKKI 478


>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
          Length = 477

 Score =  179 bits (455), Expect = 1e-42
 Identities = 109/337 (32%), Positives = 159/337 (47%), Gaps = 1/337 (0%)
 Frame = +3

Query: 27   IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGSVN 206
            I + + GWS+ TLSYAG+ EL+R+V+QG+  FW  I P+P  V  +I    R+FLWG   
Sbjct: 182  ITSLIQGWSSKTLSYAGKVELIRAVIQGIANFWTDIFPLPQFVLDRINVSYRNFLWGKAE 241

Query: 207  PSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLRGRNIW 386
                                                            +H  Y +G N+W
Sbjct: 242  ------------------------------------------------VHHNYFKGGNVW 253

Query: 387  DWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYNFFRPHQP 566
            D+     DS L K +  IRDII  K  + E A Q L SWN+N ++      Y++ R  +P
Sbjct: 254  DFISSASDSVLIKKIIHIRDIITIKEDNVEAAKQTLNSWNSNEQLLA-GKAYDYIRGVKP 312

Query: 567  EVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDVDKLCVFCGTKPETCQHLYFE 746
             V W++V+W+  I  K SF LWL  ++ + T DR  +++   LC  C TK ++  HL+F 
Sbjct: 313  AVNWNSVVWNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGLLCPLCRTKAKSHAHLFFS 372

Query: 747  CAFTRAVWTGIRGWIGIDRQMTTFSSAI-KWLKKEAKGTSWHSRGQKIAFATTVYQLWNA 923
            C  +  VW  IR WI + RQ  +    I   +   A   +W  + + +A A  VY  W +
Sbjct: 373  CRISLQVWANIRDWIPLHRQTISLQCTINSRICGRATSGTW-GKFRCLALAIAVYCTWIS 431

Query: 924  RNRLIFEGEVSHIDLVIHKIKTHVYKVMFSLYPDVLV 1034
            RN L+FE     +  +I+KIK  VYK      P VL+
Sbjct: 432  RNLLLFENSPFSVINIINKIKFLVYKHSRVRVPIVLL 468


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  179 bits (454), Expect = 2e-42
 Identities = 101/320 (31%), Positives = 163/320 (50%), Gaps = 9/320 (2%)
 Frame = +3

Query: 15   LVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW 194
            L+ KI T   GW A+ LSYAGR +LV+++L  ++ +W  I P+P  +   + + CR FLW
Sbjct: 777  LIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLW 836

Query: 195  -GSVNPS----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQ 359
             G+V+ S    VAW  L  PKS GGL + +   WN A + K LW I   +D LW +W++ 
Sbjct: 837  TGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNA 896

Query: 360  VYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNA--NHRVKGPN 533
             Y++ +NI +  +  + S + + +   R+++ +  G           W A  NH      
Sbjct: 897  YYIKRQNIENVTVSSNTSWILRKIFESRELLTRTGG-----------WEAVSNHMNFSIK 945

Query: 534  NPYNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RW-MDVDKLCVFC 707
              Y   +     V W  +I ++   PK  F LWL   +R+ T +R+ RW  DV  LC  C
Sbjct: 946  KTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMC 1005

Query: 708  GTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKI 887
            G + ET QHL+F C +++ +W  +  ++ +  Q    +     +KK A+ T   ++   +
Sbjct: 1006 GNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKK-ARSTKDRNKLYVM 1064

Query: 888  AFATTVYQLWNARNRLIFEG 947
             F  +VY +W  RN  +F G
Sbjct: 1065 MFTESVYAIWLLRNAKVFRG 1084


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  165 bits (417), Expect = 3e-38
 Identities = 93/322 (28%), Positives = 152/322 (47%), Gaps = 9/322 (2%)
 Frame = +3

Query: 3    YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
            YY  L+ KI T +  W++  L+  GR ++V   +  +  FW+  LPIP  V  KI S+CR
Sbjct: 598  YYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCR 657

Query: 183  SFLWG-----SVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYK 347
            SF+W      +    +AW+++C PK +GGL + + + WNH  +   LWN+    D LW K
Sbjct: 658  SFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVK 717

Query: 348  WIHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDII--VQKCGSQERAAQLLASWNANHRV 521
            WIH  Y++  ++ +  +  + S + KN+ S R+ I  +Q    +   ++      A  ++
Sbjct: 718  WIHAHYIKNSSVMNTMVTNNFSWVLKNVLSQREYIHTLQPVWDELLNSERFKMKKAYDKM 777

Query: 522  KGPNNPYNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDR-IRW-MDVDKL 695
                            V WS ++  +C  P+     WL    R+ T+DR +R+ M  DK+
Sbjct: 778  M-----------EADRVHWSGLMRKNCARPRAIHTTWLACHGRLGTKDRLVRFGMITDKI 826

Query: 696  CVFCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSR 875
               C    ET  H+ F C     +W+ +   IGID     +   + WL        W + 
Sbjct: 827  WSLCKEVEETQNHILFSCKVATDIWSNVLNRIGIDHVPQEWPLELDWLLNLTNRKGWRAY 886

Query: 876  GQKIAFATTVYQLWNARNRLIF 941
              K++   T+Y +W  RN  IF
Sbjct: 887  LLKLSVTETIYGIWINRNSKIF 908


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score =  152 bits (385), Expect = 2e-34
 Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3   YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
           +Y  L+ KI   + GWS  +LSYAG+ EL+R+V+QG+  FW+ I P+P  V  +I + CR
Sbjct: 108 HYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWIGIFPLPQSVLDRINASCR 167

Query: 183 SFLWGSVN-----PSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYK 347
           +FLWG  +     P VAWS +C PK EGGLGL + + WN ALL+  LW+    KD+L   
Sbjct: 168 NFLWGKADIGKKKPLVAWSVVCSPKREGGLGLFNLKDWNLALLSCILWDFHCKKDSL--- 224

Query: 348 WIHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNAN 512
           W+H  Y R  ++W++      S L K +  IRD I+ K  S E A + + SW  N
Sbjct: 225 WVHHYYFRRSDVWNYNTSSSYSVLIKKIIQIRDFIISKELSTEEAKKRIQSWRTN 279


>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
          Length = 517

 Score =  152 bits (384), Expect = 2e-34
 Identities = 107/411 (26%), Positives = 169/411 (41%), Gaps = 83/411 (20%)
 Frame = +3

Query: 3    YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
            Y + LV +I + V  W+  TLSYAGR +L+ SVL  ++ +W S+  +P  V   +  I +
Sbjct: 72   YCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMK 131

Query: 183  SFLWG-----SVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKD-TLWY 344
            SFLW      +    VAW  +CLPK EGGLG++  + WN   L K +WN+  + D ++W 
Sbjct: 132  SFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWS 191

Query: 345  KWIHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQK----CGSQERAAQLLASWN-- 506
             WI    LRGRN W  +  ++ S  +  +  +R +   K     G     +    +W+  
Sbjct: 192  TWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPH 251

Query: 507  ---------------------------ANHRVKGPNNPYNFFRPHQPEVPWSN------- 584
                                        N   K P      + P    +P ++       
Sbjct: 252  SPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQK 311

Query: 585  --VIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDV------------------------ 686
              ++W     P H F + +  +   R R  + W D+                        
Sbjct: 312  DELVWLD--SPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTT 369

Query: 687  -DKL----------CVFCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIK 833
             DKL          C  C    E   HL+FEC++T+A+W  +     I R    +   I+
Sbjct: 370  QDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIR 429

Query: 834  WLKKEAKGTSWHSRGQKIAFATTVYQLWNARNRLIFEGEVSHIDLVIHKIK 986
            W      G S+ +   K++FA TVY +W  RN  IF G     +LV+++I+
Sbjct: 430  WATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGMSRTPNLVLNQIE 480


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  152 bits (383), Expect = 3e-34
 Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 7/261 (2%)
 Frame = +3

Query: 9    EELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSF 188
            E++VGKIR     WS+  LS AGR +LVRS++  +  +W+S+ P+P  V  KI SICRSF
Sbjct: 265  EKIVGKIRH----WSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSF 320

Query: 189  LW-GSVNPS----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWI 353
            +W GS        VAW  +C P   GGL L + + WN   + K LWNI   +D LW KWI
Sbjct: 321  IWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWI 380

Query: 354  HQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPN 533
            H  +L+G N+    ++ + + + K+        V K   Q    QL+       R     
Sbjct: 381  HAYFLKGDNVMSATIKSNSTWILKS--------VMKQRPQVNNLQLVWIEMLRKRKFSMK 432

Query: 534  NPYNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDVDK--LCVFC 707
              Y        ++ W  ++  +   P+ +  LWL  Q+R+ T+ R++ M++ +  LC  C
Sbjct: 433  QVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKNMNMIQCSLCSLC 492

Query: 708  GTKPETCQHLYFECAFTRAVW 770
              + E   HL F C  T+A+W
Sbjct: 493  KEQDEDLDHLMFSCRVTKAIW 513


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  150 bits (378), Expect = 1e-33
 Identities = 94/320 (29%), Positives = 147/320 (45%), Gaps = 12/320 (3%)
 Frame = +3

Query: 6    YEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRS 185
            Y  L+  I+  +  W+   LSYAGR  L+ SVL  +  FWL+   +P     +I  IC +
Sbjct: 313  YSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSA 372

Query: 186  FLWGS--VNPS---VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKW 350
            FLW    +NP    V W  +C PK EGGLGLR  +  N     K +W I  + ++LW +W
Sbjct: 373  FLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRW 432

Query: 351  IHQVYLRGRNIWDWELRRD-DSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKG 527
            I Q  L+    W  +   + DS L++  +   D  + K  +++       +WN       
Sbjct: 433  IEQYLLKHDTFWSVQTTTNMDSVLWRGRN---DEYMPKFSTRD-------TWNQTRNTST 482

Query: 528  PNNPYNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDR-IRW-MDVDKLCV 701
            P             V W   IW +   PK SF  WL  Q+R+ T D+ ++W   +   CV
Sbjct: 483  P-------------VTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCV 529

Query: 702  FCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQ 881
             C    ET  HL+F C +T  +W  +   I   +  T +S+ +      +  T+W +R +
Sbjct: 530  LCNNNIETRNHLFFSCCYTAEIWENLAKNIYKAKFSTNWSTIL-----TSVSTTWRNRTE 584

Query: 882  ----KIAFATTVYQLWNARN 929
                +  F  T++ +W+ RN
Sbjct: 585  SFLARYIFQATIHTIWHERN 604


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  145 bits (367), Expect = 2e-32
 Identities = 95/332 (28%), Positives = 148/332 (44%), Gaps = 9/332 (2%)
 Frame = +3

Query: 15   LVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW 194
            LV  I      W A  LSYAGR +L++S+L  ++ +W  I P+   V   +  +CR FLW
Sbjct: 774  LVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLW 833

Query: 195  GSVNPS-----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQ 359
                       VAW+T+  PKS GG  + + + WN A + K LW I+  +D LW +WIH 
Sbjct: 834  TGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHS 893

Query: 360  VYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNP 539
             Y++ ++I    +    + + + +   RD +       E       S    ++    N  
Sbjct: 894  YYIKRQDILTVNISNQTTWILRKIVKARDHLSNIGDWDEICIGDKFSMKKAYKKISENGE 953

Query: 540  YNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RW-MDVDKLCVFCGT 713
                      V W  +I ++   PK  F LW+    R+ T DRI RW +  D     C  
Sbjct: 954  ---------RVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRN 1004

Query: 714  KPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAF 893
              ET QHL+F C+++  VW+ I   +       +    I  +  +A+      +G+ I  
Sbjct: 1005 DGETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQAR----KKKGKLIVM 1060

Query: 894  ATT--VYQLWNARNRLIFEGEVSHIDLVIHKI 983
              T  VY +W  RN+  F GE    + V+ KI
Sbjct: 1061 LYTEFVYAIWKQRNKRTFTGENKDENEVLRKI 1092


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score =  145 bits (366), Expect = 3e-32
 Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3   YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
           +Y  L+ KI   + GW+  +LSY G+ EL+++V+QG+  FW+ I P+P  V  +I + C 
Sbjct: 141 HYAPLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNFWMRIFPLPQSVLDRINASCC 200

Query: 183 SFLW-----GSVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYK 347
           +FLW     G   P VAW  +C PK EGGLGL + + WN ALL+  LW+    KD+L  +
Sbjct: 201 NFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKDWNLALLSHILWDFHCKKDSLRVR 260

Query: 348 WIHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNAN 512
           W+H  Y R  + W++ +   +S L K +  IRD I+ K  S E   + + SW+ N
Sbjct: 261 WVHHYYFRRSDEWNYNISSSNSVLIKKIIQIRDFIISKELSMEETKKRIQSWSTN 315


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  142 bits (359), Expect = 2e-31
 Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 12/324 (3%)
 Frame = +3

Query: 15   LVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW 194
            L+ +I T +  W    LS+AGR +L++SVL  ++ +W S L +P  V   I    R FLW
Sbjct: 611  LLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLW 670

Query: 195  -----GSVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQ 359
                 G     VAWS +CLPK EGGLG++D   WN AL+   +WN+  +    W  W+  
Sbjct: 671  AGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKV 730

Query: 360  VYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNP 539
              L+G + W+  L    S  ++ L  IR++      +     +  + W  N    GP   
Sbjct: 731  YLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSLWFDNWHPLGPLT- 789

Query: 540  YNFFRPHQPEVPW-SNVIW-----SSCIMPKHSFHLWLCKQSRIR-TRDRIRWMDVDKLC 698
                      + W SN+I       S ++  + F+      + +R +R  + W    +L 
Sbjct: 790  ----------LRWSSNIIGESGLSKSAMLTPNGFYSTSSAWNTLRPSRFIVPWY---RLV 836

Query: 699  VFCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRG 878
             F     ET  HL+F+CA++  +WT +     + + +  +S  I W+    KG S     
Sbjct: 837  WFVA---ETHNHLFFDCAYSFGIWTHVLSKCDVSKPLLPWSDFIFWVATNWKGNSLPVVI 893

Query: 879  QKIAFATTVYQLWNARNRLIFEGE 950
             K+A    VY +W  RN   F  E
Sbjct: 894  LKLALQAVVYAIWRERNNRRFRNE 917


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  135 bits (340), Expect = 3e-29
 Identities = 93/324 (28%), Positives = 141/324 (43%), Gaps = 18/324 (5%)
 Frame = +3

Query: 15   LVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW 194
            L+ KIR+ +  W    LSYAGR +L+ SV+  +  FW+S   +P     +I  I  +FLW
Sbjct: 1044 LLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLW 1103

Query: 195  GS--VNP---SVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQ 359
                +NP    VAW  +C PKSEGGLGLR     N     K +W +   K +LW  WI  
Sbjct: 1104 SGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQN 1163

Query: 360  VYLR--GRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPN 533
              +R     +     R     +  ++    + ++ +    E+   L  S     + K   
Sbjct: 1164 NLIRTVAEALSSHRRRSHRDDILNDIEEELEKLLCRGICTEQDRSLCRSIGGQFKAK--- 1220

Query: 534  NPYNFFRP---HQPE-----VPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RW-MD 683
                FF P   HQ         W   IW S   PK +F  WL    R+ T D++  W   
Sbjct: 1221 ----FFSPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRG 1276

Query: 684  VDKLCVFCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLK-KEAKGT 860
            +  +CV C    E+  HL+F C F+  +W  +   + + R  T F + +  L  ++  GT
Sbjct: 1277 ISSVCVLCNISAESRDHLFFSCNFSSHIWDRLTRRLLLCRYTTNFPALLLLLSGQDFSGT 1336

Query: 861  SWHSRGQKIAFATTVYQLWNARNR 932
                   +  F  T++ LW  RN+
Sbjct: 1337 KRFL--LRYVFQATIHTLWRERNK 1358


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score =  127 bits (318), Expect = 1e-26
 Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 5/132 (3%)
 Frame = +3

Query: 3   YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
           +Y  L+ KI   + GWS  +LSYAG+ EL+R+V+QG+  FW+ I P+   V  +I + C 
Sbjct: 108 HYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWMKIFPLSQSVLDRINASCC 167

Query: 183 SFLWGSVNPS-----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYK 347
           +FLWG  +       +AWS +C PK EGGLGL + + WN  LL++ LW+    KD LW +
Sbjct: 168 NFLWGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVR 227

Query: 348 WIHQVYLRGRNI 383
           W+H  Y R  ++
Sbjct: 228 WVHHYYFRASDV 239


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  120 bits (302), Expect = 7e-25
 Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
 Frame = +3

Query: 15  LVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW 194
           L+ K+   ++ W+A  LSYAGR +LV++VL GV+  W  +  IPA +   I  +CRS+LW
Sbjct: 582 LIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLW 641

Query: 195 GSVN-----PSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQ 359
             V        +AW  +C PK EGGLGL + + WN + + K  W++   +D LW KWIH 
Sbjct: 642 SGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHA 701

Query: 360 VYLRGRNIW 386
            Y++G+  W
Sbjct: 702 YYIKGQREW 710


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  120 bits (302), Expect = 7e-25
 Identities = 93/344 (27%), Positives = 140/344 (40%), Gaps = 86/344 (25%)
 Frame = +3

Query: 6    YEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRS 185
            Y  L+  ++T +  W+A +LSYAGR  L+ SV+  +  FW+S   +PA    +I  +C +
Sbjct: 1083 YSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSA 1142

Query: 186  FLWGS--VNPS---VAWSTLCLPKSEGGLGLRDFQSWNHALLAKT--------------- 305
            FLW    +NP    +AWS++C PK EGGLG++     N     K                
Sbjct: 1143 FLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTW 1202

Query: 306  LWNIQGNKDTLWY--------KWIHQVYLRGRNI----WDWELRRDDS------------ 413
            +W     K T W          W+ +  L+ R +       E+R   S            
Sbjct: 1203 IWTFIIRKGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLG 1262

Query: 414  ----------------PLFKNLHSIR----------------DIIVQKCGSQER-AAQLL 494
                            PL  NL ++                 +  +Q+   QER A   +
Sbjct: 1263 RLLDITGTRRVIDLGIPLETNLETVLRTHQHRQHRAAIYNRINAEIQRLQQQEREAGPDI 1322

Query: 495  ASWNANHRVKGPNNP-------YNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRI 653
            + W +   +K   N        +N  R HQP+  W   +W     PK+SF LWL  Q+R+
Sbjct: 1323 SLWRS---LKNDFNKRFITKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRL 1379

Query: 654  RTRDRIRWMDVDKL--CVFCGTKPETCQHLYFECAFTRAVWTGI 779
             T DRI+  +  +L  C  C    ET  HL+F C +T  VW  +
Sbjct: 1380 STGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEAL 1423


>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score =  120 bits (300), Expect = 1e-24
 Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
 Frame = +3

Query: 3   YYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICR 182
           +Y  L+ KI   + GWS  +LSYAG+ EL+R+V+QG+  FW+ I  +P  V   I + CR
Sbjct: 65  HYALLLSKITGLIQGWSKKSLSYAGKLELIRAVIQGIVNFWMEIFSLPQSVMDWINASCR 124

Query: 183 SFLWGSVN-----PSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLW 341
           +FLWG  +     P VAWS +C PK EGGLGL + + WN ALL++ LW+    KD+LW
Sbjct: 125 NFLWGKADIGKNKPLVAWSVVCSPKKEGGLGLLNLKDWNLALLSRILWDFHCKKDSLW 182


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  118 bits (296), Expect = 3e-24
 Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
 Frame = +3

Query: 6    YEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRS 185
            Y +L+ KI    + W+  TLS+AGR +L+ SV+     FWLS   +P      I  +C  
Sbjct: 778  YSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNR 837

Query: 186  FLWGSV-----NPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKW 350
            FLWG+      +  V+W   CLPK+EGGLGLR+F +WN  L  + +W +   +D+LW  W
Sbjct: 838  FLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAW 897

Query: 351  IHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGP 530
             H   LR  N W+ E     S ++K +  +R +  +         QLL+ W  +    GP
Sbjct: 898  NHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGP 957



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
 Frame = +3

Query: 576  WSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDVDK--LCVFCGTKPETCQHLYFEC 749
            W+  +W    +PK++F+ W+   +R+  R R      ++  LC  C  + ET  HL+  C
Sbjct: 1051 WAAAVWYKGCIPKYAFNFWVAHLNRLPVRARTTHWSTNRPSLCCVCQRETETRDHLFIHC 1110

Query: 750  AFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAFATTVYQLWNARN 929
                 +W  +    G  +    +   I+W+   +   S+    +K+A  T ++ +W  RN
Sbjct: 1111 TLGSLIWQQVLARFGRSQMFREWKDIIEWML--SNQGSFSGTLKKLAVQTAIFHIWKERN 1168


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  118 bits (295), Expect = 5e-24
 Identities = 90/339 (26%), Positives = 159/339 (46%), Gaps = 27/339 (7%)
 Frame = +3

Query: 6    YEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRS 185
            +  ++ +++     WSA  LS AG+  +++SV   +  + +S   +P  + S+I ++  +
Sbjct: 1147 FNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMN 1206

Query: 186  FLWGSVN-----PSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKW 350
            F W         P +AW  L   K EGGLG RD   +N ALLAK +W +  N ++L+ + 
Sbjct: 1207 FWWEKNAKKREIPWIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARI 1266

Query: 351  IHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQ----ERAAQLLASWNAN-- 512
            +   Y R  +I D + +R  S  + ++ +  D+I  K GS+    +        WNA+  
Sbjct: 1267 MKARYFREDSILDAKRQRYQSYGWTSMLAGLDVI--KKGSRFIVGDGKTGSYRYWNAHLI 1324

Query: 513  HRVKGPN------NPYNFFRPHQPEVPWS------NVIWSSCIMPKHSFHLWLCKQSRIR 656
             ++  P+      N +     HQ ++ W+        +W   I+PK  + LW      + 
Sbjct: 1325 SQLVSPDDHRFVMNHHLSRIVHQDKLVWNYSSSGDYTLWKLPIIPKIKYMLWRTISKALP 1384

Query: 657  TRDRI--RWMDVDKLCVFCGTKPETCQHLYFECAFTRAVWTGIRG--WIGIDRQMTTFSS 824
            TR R+  R MD+D  C  C T+ ET  H+ F C +  ++W G+    W+           
Sbjct: 1385 TRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYAASIW-GLSNFPWLPGHTFSQDTEE 1443

Query: 825  AIKWLKKEAKGTSWHSRGQKIAFATTVYQLWNARNRLIF 941
             I +L       + ++  Q++A    +++LW ARN L+F
Sbjct: 1444 NISFLINSFSNNTLNTE-QRLAPFWLIWRLWKARNNLVF 1481