BLASTX nr result

ID: Rehmannia24_contig00027845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027845
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94731.1| unknown [Populus trichocarpa]                           59   7e-07
ref|XP_006375068.1| hypothetical protein POPTR_0014s04080g [Popu...    59   9e-07
ref|XP_006375067.1| hypothetical protein POPTR_0014s04080g [Popu...    59   9e-07
ref|XP_006375066.1| hypothetical protein POPTR_0014s04080g [Popu...    59   9e-07
ref|XP_002326894.1| NAC domain protein, IPR003441 [Populus trich...    59   9e-07

>gb|ABK94731.1| unknown [Populus trichocarpa]
          Length = 415

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +3

Query: 108 ELECFLRGDYLELNDLEDPEXXXXXXXXXXXXXXXXDEDFDVSDFLRDLEEDENNYMQGQ 287
           E++CF RGDYLEL DL++P                 DE FD    LRDLE + N  +  +
Sbjct: 240 EIDCFSRGDYLELLDLDNPASRSSSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQK 299

Query: 288 QSTLRYNF-TSVRPNNVVLQPASSGSLLT 371
               + +   S+RP+ VV+ PAS GS ++
Sbjct: 300 DKDCKLSVAASLRPDEVVVLPASHGSYIS 328


>ref|XP_006375068.1| hypothetical protein POPTR_0014s04080g [Populus trichocarpa]
           gi|550323382|gb|ERP52865.1| hypothetical protein
           POPTR_0014s04080g [Populus trichocarpa]
          Length = 274

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +3

Query: 108 ELECFLRGDYLELNDLEDPEXXXXXXXXXXXXXXXXDEDFDVSDFLRDLEEDENNYMQGQ 287
           E++CF RGDYLEL DL++P                 DE FD    LRDLE + N  +  +
Sbjct: 99  EIDCFSRGDYLELLDLDNPASRSSSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQK 158

Query: 288 QSTLRYNF-TSVRPNNVVLQPASSGSLL 368
               + +   S+RP+ VV+ PAS GS +
Sbjct: 159 DKDCKLSVAASLRPDEVVVLPASHGSYI 186


>ref|XP_006375067.1| hypothetical protein POPTR_0014s04080g [Populus trichocarpa]
           gi|550323381|gb|ERP52864.1| hypothetical protein
           POPTR_0014s04080g [Populus trichocarpa]
          Length = 192

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +3

Query: 108 ELECFLRGDYLELNDLEDPEXXXXXXXXXXXXXXXXDEDFDVSDFLRDLEEDENNYMQGQ 287
           E++CF RGDYLEL DL++P                 DE FD    LRDLE + N  +  +
Sbjct: 17  EIDCFSRGDYLELLDLDNPASRSSSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQK 76

Query: 288 QSTLRYNF-TSVRPNNVVLQPASSGSLL 368
               + +   S+RP+ VV+ PAS GS +
Sbjct: 77  DKDCKLSVAASLRPDEVVVLPASHGSYI 104


>ref|XP_006375066.1| hypothetical protein POPTR_0014s04080g [Populus trichocarpa]
           gi|550323380|gb|ERP52863.1| hypothetical protein
           POPTR_0014s04080g [Populus trichocarpa]
          Length = 411

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +3

Query: 108 ELECFLRGDYLELNDLEDPEXXXXXXXXXXXXXXXXDEDFDVSDFLRDLEEDENNYMQGQ 287
           E++CF RGDYLEL DL++P                 DE FD    LRDLE + N  +  +
Sbjct: 236 EIDCFSRGDYLELLDLDNPASRSSSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQK 295

Query: 288 QSTLRYNF-TSVRPNNVVLQPASSGSLL 368
               + +   S+RP+ VV+ PAS GS +
Sbjct: 296 DKDCKLSVAASLRPDEVVVLPASHGSYI 323


>ref|XP_002326894.1| NAC domain protein, IPR003441 [Populus trichocarpa]
          Length = 385

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +3

Query: 108 ELECFLRGDYLELNDLEDPEXXXXXXXXXXXXXXXXDEDFDVSDFLRDLEEDENNYMQGQ 287
           E++CF RGDYLEL DL++P                 DE FD    LRDLE + N  +  +
Sbjct: 210 EIDCFSRGDYLELLDLDNPASRSSSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQK 269

Query: 288 QSTLRYNF-TSVRPNNVVLQPASSGSLL 368
               + +   S+RP+ VV+ PAS GS +
Sbjct: 270 DKDCKLSVAASLRPDEVVVLPASHGSYI 297


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