BLASTX nr result
ID: Rehmannia24_contig00027813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00027813
(603 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006576518.1| replication protein 1a [Amazon lily mild mot... 350 2e-94
gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform v... 296 4e-78
ref|NP_619770.1| replicase [Pelargonium zonate spot virus] gi|82... 194 2e-47
gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus] 190 3e-46
ref|YP_233101.2| 1a protein [Cassia yellow blotch virus] gi|5131... 177 2e-42
emb|CAA41361.1| 1a protein [Brome mosaic virus] 174 2e-41
ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03... 174 2e-41
dbj|BAJ41520.1| 1a protein [Brome mosaic virus] 174 2e-41
gb|ABF83485.1| 1a [Brome mosaic virus] 174 2e-41
gb|ADW09019.1| replication protein 1a [Brome mosaic virus] 171 1e-40
gb|AAN37635.1| 1a protein [Cowpea chlorotic mottle virus] 171 2e-40
ref|NP_689392.1| 1a protein [Spring beauty latent virus] gi|2253... 169 7e-40
gb|AAN37631.1| 1a protein [Cowpea chlorotic mottle virus] 168 1e-39
ref|NP_659000.1| 1a protein [Broad bean mottle virus] gi|401312|... 166 5e-39
gb|AEI54608.1| 1a protein [Cowpea chlorotic mottle virus] 166 6e-39
ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus] g... 162 7e-38
gb|AEI54612.1| 1a protein [Cowpea chlorotic mottle virus] 161 1e-37
ref|NP_613278.1| 1a protein [Cowpea chlorotic mottle virus] gi|1... 161 1e-37
gb|ADR82073.1| 1a protein [Tomato aspermy virus] 159 7e-37
ref|NP_620760.1| 1a protein [Tomato aspermy virus] gi|137257|sp|... 158 1e-36
>ref|YP_006576518.1| replication protein 1a [Amazon lily mild mottle virus]
gi|398650492|dbj|BAM34543.1| replication protein 1a
[Amazon lily mild mottle virus]
Length = 945
Score = 350 bits (898), Expect = 2e-94
Identities = 172/201 (85%), Positives = 188/201 (93%)
Frame = -1
Query: 603 QAKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSGW 424
QAKDEFVAYTRK++SNAAANL+RLWKLCGGSGSDNFVSTNCL+VLKLGDSLINFHKRSG+
Sbjct: 550 QAKDEFVAYTRKINSNAAANLSRLWKLCGGSGSDNFVSTNCLDVLKLGDSLINFHKRSGF 609
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
I++TNETY+VGFNGNGLGVK DENYIVDKTCILDNL +IAEGADKA S+A+ +L+DGV
Sbjct: 610 IYKTNETYEVGFNGNGLGVKRDDENYIVDKTCILDNLEAIAEGADKASVSTASIILVDGV 669
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSPDLGKRFVRTADSVLMHDCIT 64
AGCGKTTSICDQFNAE+DLIVTANRKS+ EIR KLFKDSPD GK +VRTADSVLMHDCI
Sbjct: 670 AGCGKTTSICDQFNAESDLIVTANRKSAVEIRHKLFKDSPDAGKIYVRTADSVLMHDCIK 729
Query: 63 APRILFDECGLLHFGQLVAVA 1
A RILFDE GLLHFGQLVAVA
Sbjct: 730 AERILFDEVGLLHFGQLVAVA 750
>gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform virus]
Length = 943
Score = 296 bits (757), Expect = 4e-78
Identities = 149/202 (73%), Positives = 170/202 (84%), Gaps = 1/202 (0%)
Frame = -1
Query: 603 QAKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSGW 424
QAK EFVAYTR L+SNAA+NL RLW+LCGG GSDNFVST CLNVLKLGDS INFHK SGW
Sbjct: 541 QAKAEFVAYTRTLNSNAASNLKRLWQLCGGDGSDNFVSTECLNVLKLGDSQINFHKSSGW 600
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGAD-KAMNSSATFVLMDG 247
IF T+ +Y+VG+NG GLGVK ENYIVDKTC LDNLA+IA+GA+ K + + L+
Sbjct: 601 IFPTSTSYEVGYNGRGLGVKGETENYIVDKTCTLDNLAAIADGAEKKPVFQKRSSCLLTV 660
Query: 246 VAGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSPDLGKRFVRTADSVLMHDCI 67
GCGKTTSI +QF+A +DLIVTANRKS+ EIR+KLF+ SPDLGK+FVRTADSVLMHDCI
Sbjct: 661 SLGCGKTTSIINQFDANSDLIVTANRKSAVEIRNKLFEFSPDLGKKFVRTADSVLMHDCI 720
Query: 66 TAPRILFDECGLLHFGQLVAVA 1
TA R+LFDE GLLHFGQLVAVA
Sbjct: 721 TARRLLFDEVGLLHFGQLVAVA 742
>ref|NP_619770.1| replicase [Pelargonium zonate spot virus]
gi|82004832|sp|Q9DUT3.1|1A_PZSVT RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|10185102|emb|CAC08526.1|
unnamed protein product [Pelargonium zonate spot virus]
Length = 962
Score = 194 bits (493), Expect = 2e-47
Identities = 102/203 (50%), Positives = 134/203 (66%), Gaps = 3/203 (1%)
Frame = -1
Query: 603 QAKDEFVAYTRKLHSNAAANLARLWKLCGG-SGSDNFVSTNCLNVLKLGDSLINFHKRSG 427
+A E+ Y KL N +NLA LW LCGG S S+N +ST L +++ DSL+N HK G
Sbjct: 577 EAMKEYKRYLLKLQKNTESNLAGLWSLCGGTSDSNNLISTEVLRIMRQSDSLVNLHKADG 636
Query: 426 -WIFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMD 250
W+F + Y VG+N +GLG K P+E ++V+K C+L+N +A G A LMD
Sbjct: 637 GWLFPNDFEYMVGYNSSGLGEKRPNEVFLVNKDCVLNNNVLLANGVP-AQPPKGNINLMD 695
Query: 249 GVAGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSPDLGKRFVRTADSVLMHDC 70
GVAGCGKTT+I F E+DLIVTAN+KSSE+I +F+D+PD+G+ VRTADSVLMH
Sbjct: 696 GVAGCGKTTAIKRAFVFESDLIVTANKKSSEDILKAMFRDTPDIGRNKVRTADSVLMHGV 755
Query: 69 I-TAPRILFDECGLLHFGQLVAV 4
R+LFDE L+HFGQL A+
Sbjct: 756 AHKVKRVLFDEVSLVHFGQLCAI 778
>gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus]
Length = 962
Score = 190 bits (482), Expect = 3e-46
Identities = 101/203 (49%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
Frame = -1
Query: 603 QAKDEFVAYTRKLHSNAAANLARLWKLCGG-SGSDNFVSTNCLNVLKLGDSLINFHKRSG 427
+A E+ Y KL N +NLA LW LCGG S S+N +ST L +++ DSL+N HK G
Sbjct: 577 EAMKEYKRYLLKLQRNTESNLAGLWSLCGGTSDSNNLISTEVLRIMRQSDSLVNLHKADG 636
Query: 426 -WIFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMD 250
W+F + Y VG+N +GLG K +E ++V+K C+L+N +A G A LMD
Sbjct: 637 SWLFPNDFEYMVGYNSSGLGEKRSNEVFLVNKDCVLNNNVLLANGVP-AQPPKGNINLMD 695
Query: 249 GVAGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSPDLGKRFVRTADSVLMHDC 70
GVAGCGKTT+I F E+DLIVTAN+KSSE+I +F D+PD+G+ VRTADSVLMH
Sbjct: 696 GVAGCGKTTAIKKAFVFESDLIVTANKKSSEDIIKAMFNDTPDIGRNKVRTADSVLMHGV 755
Query: 69 I-TAPRILFDECGLLHFGQLVAV 4
R+LFDE L+HFGQL A+
Sbjct: 756 AHKVKRVLFDEVSLVHFGQLCAI 778
>ref|YP_233101.2| 1a protein [Cassia yellow blotch virus] gi|513125395|dbj|BAD98316.2|
1a protein [Cassia yellow blotch virus]
Length = 955
Score = 177 bits (450), Expect = 2e-42
Identities = 88/200 (44%), Positives = 130/200 (65%), Gaps = 3/200 (1%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFH-KRSGWIFE 415
E+ Y ++LH N+ +NL R+W L GG G+ + + L D LIN H SGW++
Sbjct: 563 EYSNYCQRLHENSLSNLRRIWLLAGGKGTV-ISNKSMLETYHRVDCLINAHIAGSGWLYP 621
Query: 414 TNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGVAGC 235
T + Y +G+N +GLG K E +IVDK+C++ N AS+A+ + + L DGVAGC
Sbjct: 622 TEQEYTIGYNDDGLGPKQAGETFIVDKSCVISNNASLAKASQGLKAPKCSVTLCDGVAGC 681
Query: 234 GKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSP--DLGKRFVRTADSVLMHDCITA 61
GKTT+I + F+ E D+IVTAN+KS+ ++R+ +F + P ++ +F+RTADS LMH +
Sbjct: 682 GKTTAIKNTFSIEKDIIVTANKKSASDVREAIFPEDPEGEIASKFIRTADSALMHGLPSC 741
Query: 60 PRILFDECGLLHFGQLVAVA 1
R+L DE GLLHFGQ++AVA
Sbjct: 742 QRLLIDEAGLLHFGQVLAVA 761
>emb|CAA41361.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 174 bits (441), Expect = 2e-41
Identities = 93/203 (45%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Frame = -1
Query: 600 AKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-W 424
A EFV Y ++LH+N+ +NL LW + GG GS+ + + D ++N H +G W
Sbjct: 568 AMKEFVRYCKRLHNNSESNLRHLWDISGGRGSE-IANKSIFETYHRIDDMVNVHLANGNW 626
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
++ Y VG+N +GLG K DE YIVDKTC NL IAE + K + ++DGV
Sbjct: 627 LYPKKYDYTVGYNEHGLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGV 686
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKD--SPDLGKRFVRTADSVLMHDC 70
AGCGKTT+I D F DLIVTANRKS+E++R LF D + + VRTADS +MH
Sbjct: 687 AGCGKTTAIKDAFRMGEDLIVTANRKSAEDVRMALFPDTFNSKVALDIVRTADSAIMHGV 746
Query: 69 ITAPRILFDECGLLHFGQLVAVA 1
+ R+L DE GLLH+GQL+ VA
Sbjct: 747 PSCHRLLVDEAGLLHYGQLLVVA 769
>ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03588.1|ORF1A_BMV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|58729|emb|CAA26228.1| unnamed
protein product [Brome mosaic virus]
Length = 961
Score = 174 bits (440), Expect = 2e-41
Identities = 93/203 (45%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Frame = -1
Query: 600 AKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-W 424
A EFV Y ++LH+N+ +NL LW + GG GS+ + + D ++N H +G W
Sbjct: 568 AMKEFVRYCKRLHNNSESNLRHLWDISGGRGSE-IANKSIFETYHRIDDMVNVHLANGNW 626
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
++ Y VG+N +GLG K DE YIVDKTC NL IAE + K + ++DGV
Sbjct: 627 LYPKKYDYTVGYNEHGLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGV 686
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKD--SPDLGKRFVRTADSVLMHDC 70
AGCGKTT+I D F DLIVTANRKS+E++R LF D + + VRTADS +MH
Sbjct: 687 AGCGKTTAIKDAFRMGEDLIVTANRKSAEDVRMALFPDTYNSKVALDVVRTADSAIMHGV 746
Query: 69 ITAPRILFDECGLLHFGQLVAVA 1
+ R+L DE GLLH+GQL+ VA
Sbjct: 747 PSCHRLLVDEAGLLHYGQLLVVA 769
>dbj|BAJ41520.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 174 bits (440), Expect = 2e-41
Identities = 93/203 (45%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Frame = -1
Query: 600 AKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-W 424
A EFV Y ++LH+N+ +NL LW + GG GS+ + + D ++N H +G W
Sbjct: 568 AMKEFVRYCKRLHNNSESNLRHLWDISGGRGSE-IANKSIFETYHRIDDMVNVHLANGNW 626
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
++ Y VG+N +GLG K DE YIVDKTC NL IAE + K + ++DGV
Sbjct: 627 LYPKKYDYTVGYNEHGLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGV 686
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKD--SPDLGKRFVRTADSVLMHDC 70
AGCGKTT+I D F DLIVTANRKS+E++R LF D + + VRTADS +MH
Sbjct: 687 AGCGKTTAIKDAFRMGEDLIVTANRKSAEDVRMALFPDTFNSKVALDVVRTADSAIMHGV 746
Query: 69 ITAPRILFDECGLLHFGQLVAVA 1
+ R+L DE GLLH+GQL+ VA
Sbjct: 747 PSCHRLLVDEAGLLHYGQLLVVA 769
>gb|ABF83485.1| 1a [Brome mosaic virus]
Length = 961
Score = 174 bits (440), Expect = 2e-41
Identities = 93/203 (45%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Frame = -1
Query: 600 AKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-W 424
A EFV Y ++LH+N+ +NL LW + GG GS+ + + D ++N H +G W
Sbjct: 568 AMKEFVRYCKRLHNNSESNLRHLWDISGGRGSE-IANKSIFETYHRIDDMVNVHLANGNW 626
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
++ Y VG+N +GLG K DE YIVDKTC NL IAE + K + ++DGV
Sbjct: 627 LYPKKYDYTVGYNEHGLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGV 686
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKD--SPDLGKRFVRTADSVLMHDC 70
AGCGKTT+I D F DLIVTANRKS+E++R LF D + + VRTADS +MH
Sbjct: 687 AGCGKTTAIKDAFRMGEDLIVTANRKSAEDVRMALFPDTFNSKVALDVVRTADSAIMHGV 746
Query: 69 ITAPRILFDECGLLHFGQLVAVA 1
+ R+L DE GLLH+GQL+ VA
Sbjct: 747 PSCHRLLVDEAGLLHYGQLLVVA 769
>gb|ADW09019.1| replication protein 1a [Brome mosaic virus]
Length = 961
Score = 171 bits (433), Expect = 1e-40
Identities = 92/203 (45%), Positives = 123/203 (60%), Gaps = 3/203 (1%)
Frame = -1
Query: 600 AKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-W 424
A EFV Y ++LH+N+ +NL LW + GG GS+ + + D ++N H +G W
Sbjct: 568 AMKEFVRYCKRLHNNSESNLRHLWDISGGRGSE-IANKSIFETYHRIDDMVNVHLANGNW 626
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
++ Y VG+N + LG K DE YIVDKTC NL IAE + K + ++DGV
Sbjct: 627 LYPKKYDYTVGYNEHSLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGV 686
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKD--SPDLGKRFVRTADSVLMHDC 70
AGCGKTT+I D F DLIVTANRKS+E++R LF D + + VRTADS +MH
Sbjct: 687 AGCGKTTAIKDAFRMGEDLIVTANRKSAEDVRMALFPDTFNSKVALDVVRTADSAIMHGV 746
Query: 69 ITAPRILFDECGLLHFGQLVAVA 1
+ R+L DE GLLH+GQL+ VA
Sbjct: 747 PSCYRLLVDEAGLLHYGQLLVVA 769
>gb|AAN37635.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 171 bits (432), Expect = 2e-40
Identities = 91/200 (45%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-WIFE 415
EF Y R+L +NA +NL RLW + G G + + L D +IN H G W++
Sbjct: 568 EFSDYCRRLDANAVSNLRRLWAIAGCDGR-TARNKSILETYHRVDDMINLHYPGGQWLYP 626
Query: 414 TNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGVAGC 235
Y+VGFN +GLG K DE Y+VDK+CI N +++ D S L DGVAGC
Sbjct: 627 KKYDYEVGFNDSGLGPKFDDELYVVDKSCICANYQVLSKNTDSLKAPSCKISLCDGVAGC 686
Query: 234 GKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSP--DLGKRFVRTADSVLMHDCITA 61
GKTT+I FN DL+VTAN+KS+E++R+ LF D+P ++ + +RTADS LMH
Sbjct: 687 GKTTAIKSAFNIAEDLVVTANKKSAEDVREALFPDNPSSEIALKVIRTADSALMHGLPQC 746
Query: 60 PRILFDECGLLHFGQLVAVA 1
R+L DE GLLH+GQL+AVA
Sbjct: 747 KRLLVDEAGLLHYGQLLAVA 766
>ref|NP_689392.1| 1a protein [Spring beauty latent virus] gi|22531640|dbj|BAC10645.1|
1a protein [Spring beauty latent virus]
Length = 958
Score = 169 bits (427), Expect = 7e-40
Identities = 90/199 (45%), Positives = 121/199 (60%), Gaps = 2/199 (1%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-WIFE 415
EF Y ++L NA +NL R+W L G ++ ST+ L D ++N H G W++
Sbjct: 568 EFADYNQRLSDNAVSNLRRIWTLAG-CNKESVNSTSILETYHRIDDMLNIHYPDGRWLYP 626
Query: 414 TNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGVAGC 235
Y VGFN +GLG + DE Y+VDKTC + N IA+ + + L DGVAGC
Sbjct: 627 NKYEYMVGFNDSGLGYRFADELYLVDKTCGIANCEEIAKACKALKAPNCSITLCDGVAGC 686
Query: 234 GKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKD-SPDLGKRFVRTADSVLMHDCITAP 58
GKTT+I F++ TDLIVTANRKS+E++R+ LF D + + VRTADS +MH
Sbjct: 687 GKTTAIKAAFDSSTDLIVTANRKSAEDVREALFGDVNSKIANEVVRTADSAIMHGLPKCS 746
Query: 57 RILFDECGLLHFGQLVAVA 1
R+L DE GLLH+GQL+AVA
Sbjct: 747 RLLIDEAGLLHYGQLLAVA 765
>gb|AAN37631.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 168 bits (425), Expect = 1e-39
Identities = 89/200 (44%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-WIFE 415
EF Y R+L +NA +NL RLW + G G + + L D +IN H G W++
Sbjct: 568 EFSDYCRRLDANAVSNLRRLWAIAGCDGR-TARNKSILETYHRVDDMINLHYPGGQWLYP 626
Query: 414 TNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGVAGC 235
Y+VG+N +GLG K DE Y+VDK+CI N +++ D S L DGVAGC
Sbjct: 627 KKYDYEVGYNDSGLGPKFDDELYVVDKSCICANYQVLSKNTDSLKAPSCKISLCDGVAGC 686
Query: 234 GKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSP--DLGKRFVRTADSVLMHDCITA 61
GKTT+I FN DL+VTAN+KS+E++R+ LF ++P ++ + +RTADS LMH
Sbjct: 687 GKTTAIKSAFNIAEDLVVTANKKSAEDVREALFPENPSSEIALKVIRTADSALMHGLPQC 746
Query: 60 PRILFDECGLLHFGQLVAVA 1
R+L DE GLLH+GQL+AVA
Sbjct: 747 KRLLVDEAGLLHYGQLLAVA 766
>ref|NP_659000.1| 1a protein [Broad bean mottle virus] gi|401312|sp|Q00020.1|ORF1A_BBMV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|210663|gb|AAA42740.1| 1a
protein [Broad bean mottle virus]
Length = 966
Score = 166 bits (420), Expect = 5e-39
Identities = 88/203 (43%), Positives = 125/203 (61%), Gaps = 3/203 (1%)
Frame = -1
Query: 600 AKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-W 424
A +EF Y+++LH N +NL LW L G G++ + + D ++N H +G W
Sbjct: 573 AINEFADYSKRLHENTVSNLRHLWTLMGCRGNE-IHNKSVAETYHRVDDMVNVHFPNGHW 631
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
++ Y VG+N GLG K +E Y+VDKTC N +IA+ K + + V++DGV
Sbjct: 632 MYPLKYEYTVGYNDGGLGEKFENELYVVDKTCSCANAKAIADACKKVSAPTCSVVMVDGV 691
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSPD--LGKRFVRTADSVLMHDC 70
AGCGKTT+I + F E D+IVTANRKS+E++R +F D+ D + + VRTADS +MH
Sbjct: 692 AGCGKTTAIKETFRFEKDIIVTANRKSAEDVRKAIFGDASDSEVALKVVRTADSAIMHGL 751
Query: 69 ITAPRILFDECGLLHFGQLVAVA 1
R+L DE GLLH+GQL+AVA
Sbjct: 752 PECHRLLVDEAGLLHYGQLLAVA 774
>gb|AEI54608.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 166 bits (419), Expect = 6e-39
Identities = 88/200 (44%), Positives = 121/200 (60%), Gaps = 3/200 (1%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-WIFE 415
EF Y R+L +NA +NL RLW + G G + + L D +IN H G W++
Sbjct: 568 EFSDYCRRLDANAVSNLRRLWAIAGCDGR-TARNKSILETYHRVDDMINLHYPGGQWLYP 626
Query: 414 TNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGVAGC 235
Y+VG+N +GL K DE Y+VDK+CI N +++ D S L DGVAGC
Sbjct: 627 KKYDYEVGYNDSGLSPKFDDELYVVDKSCICANYQVLSKNTDNLKAPSCKISLCDGVAGC 686
Query: 234 GKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSP--DLGKRFVRTADSVLMHDCITA 61
GKTT+I FN DL+VTAN+KS+E++R+ LF ++P ++ + +RTADS LMH
Sbjct: 687 GKTTAIKSAFNIAEDLVVTANKKSAEDVREALFPENPSSEIALKVIRTADSALMHGLPQC 746
Query: 60 PRILFDECGLLHFGQLVAVA 1
R+L DE GLLH+GQL+AVA
Sbjct: 747 KRLLVDEAGLLHYGQLLAVA 766
>ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus]
gi|259651322|dbj|BAI40161.1| 1a protein [Melandrium
yellow fleck virus]
Length = 948
Score = 162 bits (410), Expect = 7e-38
Identities = 85/203 (41%), Positives = 123/203 (60%), Gaps = 3/203 (1%)
Frame = -1
Query: 600 AKDEFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-W 424
A EF Y + H N +NL +LW L G G D + + ++ D L+N H SG W
Sbjct: 555 AISEFTEYCDRQHLNTTSNLHQLWTLMGCKG-DQVHNKSVVDTYHRTDDLVNVHFPSGRW 613
Query: 423 IFETNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGV 244
++ Y VG+N +GL VK +E Y+VDKTCI+ N +AE + + DGV
Sbjct: 614 MYPHEYEYVVGYNDDGLSVKFDNELYVVDKTCIVSNQQKLAEACRGLSVPTCPVYMCDGV 673
Query: 243 AGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSP--DLGKRFVRTADSVLMHDC 70
AGCGKTT+I + F E D++VTANRKS++++R +F ++P ++ R++RTADS +MH
Sbjct: 674 AGCGKTTAIKNTFQFERDVVVTANRKSADDVRAAIFPENPNNEIATRYIRTADSAIMHGL 733
Query: 69 ITAPRILFDECGLLHFGQLVAVA 1
R+L DE GL+H+GQL+AVA
Sbjct: 734 PKCKRVLIDEAGLMHYGQLLAVA 756
>gb|AEI54612.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 161 bits (408), Expect = 1e-37
Identities = 87/200 (43%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-WIFE 415
EF Y R+L +NA +NL RLW + G G + + L D +IN H G W++
Sbjct: 568 EFSDYCRRLDANAVSNLRRLWAIAGCDGR-TARNKSILETYHRVDDMINLHYPGGQWLYP 626
Query: 414 TNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGVAGC 235
Y+VG+N +GLG K DE Y+VDK+CI N +++ D S L DGVAGC
Sbjct: 627 KKYDYEVGYNDSGLGPKFDDELYVVDKSCICANYQVLSKNTDSLKAPSCKISLCDGVAGC 686
Query: 234 GKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSP--DLGKRFVRTADSVLMHDCITA 61
GKTT+I FN DL+VTAN+KS+E++R+ LF ++P ++ + ADS LMH
Sbjct: 687 GKTTAIKSAFNIAEDLVVTANKKSAEDVREALFPENPSSEIALSYKGPADSALMHGLPQC 746
Query: 60 PRILFDECGLLHFGQLVAVA 1
R+L DE GLLH+GQL+AVA
Sbjct: 747 KRLLVDEAGLLHYGQLLAVA 766
>ref|NP_613278.1| 1a protein [Cowpea chlorotic mottle virus]
gi|137252|sp|P27752.1|ORF1A_CCMV RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|331599|gb|AAA46369.1| 1a
protein [Cowpea chlorotic mottle virus]
Length = 958
Score = 161 bits (407), Expect = 1e-37
Identities = 88/200 (44%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLKLGDSLINFHKRSG-WIFE 415
EF Y R+L NA +NL RLW + G G + + L D +IN H G W++
Sbjct: 568 EFSDYCRRLDCNAVSNLRRLWAIAGCDGR-TARNKSILETYHRVDDMINLHYPGGQWLYP 626
Query: 414 TNETYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMDGVAGC 235
Y+VGFN +GLG K DE Y+VDK+CI N +++ D S L DGVAGC
Sbjct: 627 KKYDYEVGFNDSGLGPKFDDELYVVDKSCICANYQVLSKNTDSLKAPSCKISLCDGVAGC 686
Query: 234 GKTTSICDQFNAETDLIVTANRKSSEEIRDKLFKDSP--DLGKRFVRTADSVLMHDCITA 61
GKTT+I N L+VTAN+KS+E++R+ LF +P ++ + +RTADS LMH
Sbjct: 687 GKTTAIKSASNIAEHLVVTANKKSAEDVREALFPHNPSSEIAFKVIRTADSALMHGLPRC 746
Query: 60 PRILFDECGLLHFGQLVAVA 1
R+L DE GLLH+GQL+AVA
Sbjct: 747 KRLLVDEAGLLHYGQLLAVA 766
>gb|ADR82073.1| 1a protein [Tomato aspermy virus]
Length = 993
Score = 159 bits (401), Expect = 7e-37
Identities = 91/204 (44%), Positives = 126/204 (61%), Gaps = 8/204 (3%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLK---LGDSLINFHKRSG-W 424
E+ AY +LH NA +NL R+W + GG +N + +N V + + D L+N H +G W
Sbjct: 594 EYSAYEAQLHDNAVSNLDRMWCMAGGDKKNNRLESNVKFVFETYHIVDPLVNVHFPTGRW 653
Query: 423 IFETNE--TYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMD 250
++ E +Y VGFN NG+G K+ E YIV+ C++ N +A+ + + + T L+D
Sbjct: 654 LYRVPEGISYSVGFNENGIGPKADGELYIVNADCVISNSKCLADTTLQYLAPTGTISLVD 713
Query: 249 GVAGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFK--DSPDLGKRFVRTADSVLMH 76
GVAGCGKTT+I FN TD+IVTAN+KS+ +R LF DS + FVRTADS+LM+
Sbjct: 714 GVAGCGKTTAIKKMFNPATDVIVTANKKSALGVRQALFNCTDSKE-ATTFVRTADSILMN 772
Query: 75 DCITAPRILFDECGLLHFGQLVAV 4
D R+L DE LLHFGQL AV
Sbjct: 773 DTNEVQRVLVDEVVLLHFGQLCAV 796
>ref|NP_620760.1| 1a protein [Tomato aspermy virus] gi|137257|sp|P28931.1|ORF1A_TAV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|222673|dbj|BAA00936.1| ORF
[Tomato aspermy virus]
Length = 993
Score = 158 bits (400), Expect = 1e-36
Identities = 90/204 (44%), Positives = 127/204 (62%), Gaps = 8/204 (3%)
Frame = -1
Query: 591 EFVAYTRKLHSNAAANLARLWKLCGGSGSDNFVSTNCLNVLK---LGDSLINFHKRSG-W 424
E+ AY +LH NA +NL R+W + GG +N + +N V + + D L+N H +G W
Sbjct: 594 EYSAYEAQLHDNAVSNLDRMWCMAGGDKKNNRLESNVKFVFETYHIVDPLVNVHFPTGRW 653
Query: 423 IFETNE--TYQVGFNGNGLGVKSPDENYIVDKTCILDNLASIAEGADKAMNSSATFVLMD 250
++ E +Y VGFN +G+G K+ E YIV+ C++ N +A+ + + + T L+D
Sbjct: 654 LYRVPEGISYSVGFNEHGIGPKADGELYIVNADCVISNSKCLADTTLQYLAPTGTISLVD 713
Query: 249 GVAGCGKTTSICDQFNAETDLIVTANRKSSEEIRDKLFK--DSPDLGKRFVRTADSVLMH 76
GVAGCGKTT+I FN TD+IVTAN+KS+ ++R LF DS + FVRTADS+LM+
Sbjct: 714 GVAGCGKTTAIKKMFNPATDVIVTANKKSALDVRQALFNCTDSKE-ATTFVRTADSILMN 772
Query: 75 DCITAPRILFDECGLLHFGQLVAV 4
D R+L DE LLHFGQL AV
Sbjct: 773 DTNEVQRVLVDEVVLLHFGQLCAV 796