BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027802
         (689 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   228   1e-57
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...   221   2e-55
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        218   2e-54
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   217   3e-54
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   216   5e-54
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      216   7e-54
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    215   9e-54
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...   214   3e-53
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   211   2e-52
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   211   2e-52
emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]        211   2e-52
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...   209   7e-52
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]     209   7e-52
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g...   207   2e-51
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        207   2e-51
gb|ABA97104.1| retrotransposon protein, putative, unclassified [...   207   2e-51
gb|AAP54937.2| retrotransposon protein, putative, unclassified [...   206   6e-51
gb|ABA93896.1| retrotransposon protein, putative, unclassified [...   206   7e-51
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   202   1e-49
gb|AAP68381.1| putative polyprotein [Oryza sativa Japonica Group...   202   1e-49

>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  228 bits (582), Expect = 1e-57
 Identities = 111/215 (51%), Positives = 145/215 (67%)
 Frame = +2

Query: 23   KKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLDPSTY 202
            KKG EN+ ADALSRRG+  +A   I+   P W++ V  SY +D    +++   TL P+  
Sbjct: 835  KKGKENKVADALSRRGNSVMA---ISIAVPSWIEAVTNSYQNDANCKELMEQLTLAPNAD 891

Query: 203  PDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYWPKLK 382
              + + +G++RYKGR+ VG D +LR  I+  +H SA+GGHS    TY R   +FYWP +K
Sbjct: 892  SGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMK 951

Query: 383  TGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTVILVV 562
              +   VR C VC  +K +H  YPGLL+PLPI D AWTHISMDFIEGLP+S GK VI VV
Sbjct: 952  KEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVV 1011

Query: 563  VDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            VDRFTKY H + LSHP++  LVA+ F+D I+KLHG
Sbjct: 1012 VDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHG 1046


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score =  221 bits (563), Expect = 2e-55
 Identities = 110/219 (50%), Positives = 150/219 (68%), Gaps = 1/219 (0%)
 Frame = +2

Query: 23  KKGSENRAADALSR-RGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLDPST 199
           K+G EN+A DALSR R +D+V   AI+ V+P W+  V+ SY  D     ++   ++ P+ 
Sbjct: 218 KRGRENKATDALSRVRYNDQVV--AISAVTPVWILEVLASYEGDEKCRDLITQISISPTA 275

Query: 200 YPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYWPKL 379
            P++++ +G++RYKGRL +G+++ L+  +L   H+SA+GGHS    TY R   IF+WP++
Sbjct: 276 QPNYSLKNGILRYKGRLYIGSNTGLKRQLLVTFHDSALGGHSGGRVTYQRLKLIFHWPRM 335

Query: 380 KTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTVILV 559
           K  V   V+  DVC  N  +H  YPGLLQP+PI + AWTHISMDFIEGLP S  K VILV
Sbjct: 336 KQEVEEFVKLYDVCQKNNCEHVPYPGLLQPIPIPEMAWTHISMDFIEGLPKSEDKEVILV 395

Query: 560 VVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHGCRS 676
           VVDRFTKY HF+ALSHPFT   V K+F+D ++K HG  S
Sbjct: 396 VVDRFTKYSHFIALSHPFTVQHVVKVFVDNVFKHHGLPS 434


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  218 bits (554), Expect = 2e-54
 Identities = 106/219 (48%), Positives = 136/219 (62%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLD 190
            K   KKG EN+AADALSR         +   + P W+  ++ SY  DP  T +     + 
Sbjct: 804  KIEYKKGKENKAADALSRI-PSVAQLFSTTIIVPTWITEILASYATDPKCTALESQLRIT 862

Query: 191  PSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYW 370
            P  +P + +TSG++RYK RL VG  + LR+ +    H+SA+GGHS    TY RA  +FYW
Sbjct: 863  PQGHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYW 922

Query: 371  PKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTV 550
            P +K  + + V+ C VC  NK +H   PGLL PLPI + AWTHISMDFIEGLP S  K V
Sbjct: 923  PGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDV 982

Query: 551  ILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            I V+VDRFTKY HF+ALSHPFTA  +   F++  YK HG
Sbjct: 983  IWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHG 1021


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  217 bits (552), Expect = 3e-54
 Identities = 110/216 (50%), Positives = 135/216 (62%), Gaps = 1/216 (0%)
 Frame = +2

Query: 23   KKGSENRAADALSRRGDDKVA-CTAIATVSPKWVQRVILSYVDDPFFTKILIANTLDPST 199
            K G EN  ADALSR  + K   C  I  V P+WVQ +  SY +D F  KIL     D   
Sbjct: 1106 KSGKENLVADALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDP 1165

Query: 200  YPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYWPKL 379
               + + SGL++YKGR+ VG  +++R L+L   H S  GGHS +  TY R   +FYWP L
Sbjct: 1166 ERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGL 1225

Query: 380  KTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTVILV 559
            K  V + +R C  C   K +H   PGLL PL + D AWTHI+MDFIEGLP S GK VILV
Sbjct: 1226 KKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILV 1285

Query: 560  VVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            VVDR TKY HFLALSHP+T   V ++F+D I+KLHG
Sbjct: 1286 VVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHG 1321


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  216 bits (550), Expect = 5e-54
 Identities = 108/221 (48%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
 Frame = +2

Query: 23   KKGSENRAADALSRRGDDKVA----CTAIATVSPKWVQRVILSYVDDPFFTKIL--IANT 184
            K G EN  ADALSR   +K      C AIA V P+W+  +  SY +D    K+L  I   
Sbjct: 447  KAGRENLVADALSRSPKNKEEVTELCAAIAVVVPEWILDIKRSYEEDVQAHKLLSLIGTA 506

Query: 185  LDPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIF 364
             DP    ++   +G+++YKGR+ VG   ++R  ++   H+S  GGH  +  TY R   +F
Sbjct: 507  GDPEG--EYKFEAGIMKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLF 564

Query: 365  YWPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGK 544
            YWP LK GV N +RNC VC   K +H   PGLL PL + D AWTHISMDF+EGLP S GK
Sbjct: 565  YWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGK 624

Query: 545  TVILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
             VILVVVDR TKY HF+ALSHP+T   V ++F+D I+KLHG
Sbjct: 625  DVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHG 665


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  216 bits (549), Expect = 7e-54
 Identities = 103/219 (47%), Positives = 143/219 (65%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLD 190
            K + +KG +N AADALSR+  +   C AI+   P W+Q V+  Y  DP   ++L    L+
Sbjct: 1034 KIVYRKGVDNGAADALSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILN 1093

Query: 191  PSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYW 370
             +    F++  G+IR+K R+ +G + QL+  +L  MH++A+GGHS    TY +   +FYW
Sbjct: 1094 SADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYW 1153

Query: 371  PKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTV 550
            P ++  V+  V++C VC  +K D  +YPGLLQPL +  QAW  IS+DFIEGLP S     
Sbjct: 1154 PGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLPRSAHYNC 1213

Query: 551  ILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            ILVVVD+F+KYGHFL L HPFTA  VA++FLD +YKLHG
Sbjct: 1214 ILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHG 1252


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  215 bits (548), Expect = 9e-54
 Identities = 104/220 (47%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRGDDKVA-CTAIATVSPKWVQRVILSYVDDPFFTKILIANTL 187
            + + +KG  N AADALSR   ++ +    I+T SP W+Q ++  Y  DP    +L    +
Sbjct: 371  QIVYRKGKHNAAADALSRHVPEETSEFLGISTCSPVWLQDILHGYDQDPLALSLLTGLAV 430

Query: 188  DPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFY 367
            +PS+YP ++++ GLI++KG++ VGN+S ++  I+S +H+S +GGHS    TY R   +F 
Sbjct: 431  NPSSYPHYSLSKGLIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPVTYKRIKSLFS 490

Query: 368  WPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKT 547
            WP +K  V  Q+ +C VC   K D  +YPGLLQPLP+ D AW  ISMDFIEGLP S  + 
Sbjct: 491  WPHMKLTVQKQLASCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFIEGLPKSYHQD 550

Query: 548  VILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
             ILVVVD+F+KY HF+ LSHPF+A  VAK+F+  +YKLHG
Sbjct: 551  CILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYKLHG 590


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score =  214 bits (544), Expect = 3e-53
 Identities = 104/219 (47%), Positives = 135/219 (61%)
 Frame = +2

Query: 11  KFIIKKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLD 190
           K   KKG EN+AADALSR         +   + P W+  ++ SY  DP  T +     + 
Sbjct: 217 KIEYKKGKENKAADALSRI-PFVAQWFSTTIIVPTWIIEILASYATDPKCTALESQLRIT 275

Query: 191 PSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYW 370
           P  +P + +T G++RYK RL VG  + LR+ +    H+SA+GGHS    TY RA  +FYW
Sbjct: 276 PQGHPSYTLTGGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYW 335

Query: 371 PKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTV 550
           P +K  + + V+ C VC  NK +H   PGLL PLP+ + AWTHISMDFIEGLP S  K V
Sbjct: 336 PGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPVPEMAWTHISMDFIEGLPKSDNKDV 395

Query: 551 ILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
           I V+VDRFTKY HF+ALSHPFTA  +   F++  YK HG
Sbjct: 396 IWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHG 434


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  211 bits (537), Expect = 2e-52
 Identities = 103/219 (47%), Positives = 135/219 (61%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLD 190
            K   KKG EN+AADALSR        T +  + P+W+  V  SY  DP   ++     + 
Sbjct: 360  KIEYKKGQENKAADALSRMQQLNALTTTV--IVPQWITEVAASYSTDPKCHELESHLHIA 417

Query: 191  PSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYW 370
            P ++P + +  G++RYK  +VVG  + LR  +L   H+SA+GGHS    TY R   +FYW
Sbjct: 418  PQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYW 477

Query: 371  PKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTV 550
            P +K  V   V+ C VC  NK +H    GLLQPLP+ + AW+HI+MDF+EGLP S GK V
Sbjct: 478  PGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDV 537

Query: 551  ILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            I V+VDRFTKY HF+ LSHPFTA  +   FL+  YKLHG
Sbjct: 538  IWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHG 576


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  211 bits (537), Expect = 2e-52
 Identities = 103/219 (47%), Positives = 135/219 (61%)
 Frame = +2

Query: 11  KFIIKKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLD 190
           K   KKG EN+AADALSR        T +  + P+W+  V  SY  DP   ++     + 
Sbjct: 139 KIEYKKGQENKAADALSRMQQLNALTTTV--IVPQWITEVAASYSTDPKCHELESHLHIA 196

Query: 191 PSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYW 370
           P ++P + +  G++RYK  +VVG  + LR  +L   H+SA+GGHS    TY R   +FYW
Sbjct: 197 PQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYW 256

Query: 371 PKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTV 550
           P +K  V   V+ C VC  NK +H    GLLQPLP+ + AW+HI+MDF+EGLP S GK V
Sbjct: 257 PGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDV 316

Query: 551 ILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
           I V+VDRFTKY HF+ LSHPFTA  +   FL+  YKLHG
Sbjct: 317 IWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHG 355


>emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]
          Length = 1012

 Score =  211 bits (536), Expect = 2e-52
 Identities = 100/218 (45%), Positives = 145/218 (66%), Gaps = 3/218 (1%)
 Frame = +2

Query: 23   KKGSENRAADALSRRGDDKVACTAIATVS---PKWVQRVILSYVDDPFFTKILIANTLDP 193
            +KG  N AADALSR  +D +  + +  VS   P W+Q V+  Y  D + ++IL    + P
Sbjct: 431  RKGISNAAADALSR--NDTIPSSEVLAVSVCTPLWLQEVVKGYEPDTYTSQILAELVVHP 488

Query: 194  STYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYWP 373
            +    F ++ GL+RYKGR+ +GN++QL+ +I+ E+H+S +GGHS +  TY RA  +F WP
Sbjct: 489  TARKHFTLSQGLLRYKGRIWIGNNTQLQHIIIDELHSSFMGGHSGIPVTYRRAKALFAWP 548

Query: 374  KLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTVI 553
             +K  +++ ++ C VC  +K D  +YPGLLQPLP+ + AW  +S+DFIEGLP S G   I
Sbjct: 549  SMKKMILSLLKQCQVCLQSKPDRAKYPGLLQPLPVPEGAWQVVSLDFIEGLPKSHGFNCI 608

Query: 554  LVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            LVVVD+F+KY HF+ L HPFT   VA+ F+  +YKLHG
Sbjct: 609  LVVVDKFSKYAHFIPLYHPFTTASVAQEFMTHVYKLHG 646


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score =  209 bits (532), Expect = 7e-52
 Identities = 105/208 (50%), Positives = 130/208 (62%)
 Frame = +2

Query: 23   KKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLDPSTY 202
            KKG EN+AADALSRR  D   C AI  V P WV+ V  +Y+ D  + K++    L+    
Sbjct: 723  KKGKENKAADALSRRDTDGDKCLAITLVYPAWVEDVKNNYMGDEKYAKLVTGEELNEGA- 781

Query: 203  PDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYWPKLK 382
              F + SGL+RYK R+ VG  + +R  +L   HNS  GGHS +  TY +   IFYWPK+K
Sbjct: 782  EGFTLQSGLLRYKNRIYVGQSTDIRQRLLQSFHNSTFGGHSGMKVTYHKLKKIFYWPKMK 841

Query: 383  TGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTVILVV 562
              V  QV  C  C   K +H   PGLL PL I + AWTHISMDFIEGLP S GK VILVV
Sbjct: 842  KDVDRQVTECPTCQIAKPEHIHVPGLLDPLQIPEMAWTHISMDFIEGLPKSHGKDVILVV 901

Query: 563  VDRFTKYGHFLALSHPFTATLVAKLFLD 646
            VDR TKY HF+A+SHPF    V ++F++
Sbjct: 902  VDRLTKYAHFVAMSHPFDTQDVIQVFME 929


>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1246

 Score =  209 bits (532), Expect = 7e-52
 Identities = 105/208 (50%), Positives = 130/208 (62%)
 Frame = +2

Query: 23   KKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLDPSTY 202
            KKG EN+AADALSRR  D   C AI  V P WV+ V  +Y+ D  + K++    L+    
Sbjct: 809  KKGKENKAADALSRRDTDGDKCLAITLVYPAWVEDVKNNYMGDEKYAKLVTGEELNEGA- 867

Query: 203  PDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYWPKLK 382
              F + SGL+RYK R+ VG  + +R  +L   HNS  GGHS +  TY +   IFYWPK+K
Sbjct: 868  EGFTLQSGLLRYKNRIYVGQSTDIRQRLLQSFHNSTFGGHSGMKVTYHKLKKIFYWPKMK 927

Query: 383  TGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTVILVV 562
              V  QV  C  C   K +H   PGLL PL I + AWTHISMDFIEGLP S GK VILVV
Sbjct: 928  KDVDRQVTECPTCQIAKPEHIHVPGLLDPLQIPEMAWTHISMDFIEGLPKSHGKDVILVV 987

Query: 563  VDRFTKYGHFLALSHPFTATLVAKLFLD 646
            VDR TKY HF+A+SHPF    V ++F++
Sbjct: 988  VDRLTKYAHFVAMSHPFDTQDVIQVFME 1015


>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
           gi|255678117|dbj|BAH94093.1| Os08g0123950, partial
           [Oryza sativa Japonica Group]
          Length = 783

 Score =  207 bits (528), Expect = 2e-51
 Identities = 103/220 (46%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
 Frame = +2

Query: 11  KFIIKKGSENRAADALSRRGDD-KVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTL 187
           K   +KGS N AADALSR+    +    AI+   P+W+  V+ SY  DP  T+++ A TL
Sbjct: 200 KICYRKGSTNAAADALSRKPQQSEEEFNAISQCVPQWLMEVLQSYDTDPHATQLVAALTL 259

Query: 188 DPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFY 367
           +P++ P F++  G++RYKG + +GN   L+  I++EMH S +GGHS    TY R   +F 
Sbjct: 260 NPNSKPHFSLQHGVLRYKGNIWIGNSPDLQLKIINEMHASPVGGHSGFPVTYRRIKQLFA 319

Query: 368 WPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKT 547
           W  +K+ +   + NC +CA  K D  +YP LLQPLP+   AW  IS+DFIEGLP S    
Sbjct: 320 WNGMKSQIKETLANCQICAQAKPDRSRYPRLLQPLPVPKGAWQTISLDFIEGLPRSSHYN 379

Query: 548 VILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            ILVVVD+F+KY HF+ L HPFTA  VAK F+  +YKLHG
Sbjct: 380 CILVVVDKFSKYSHFIPLRHPFTAIDVAKAFMSNVYKLHG 419


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/215 (47%), Positives = 136/215 (63%)
 Frame = +2

Query: 23   KKGSENRAADALSRRGDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTLDPSTY 202
            K G EN  ADALSR    +  C AI TV P+WV+ +  SY  D    KIL     +  T 
Sbjct: 1083 KAGKENLVADALSRIPPAE-QCQAITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGDTD 1141

Query: 203  PDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFYWPKLK 382
              ++  +GL+RYKGR+ VG ++++R  ++   H+SA GGHS +  TY R   +FYWP LK
Sbjct: 1142 GSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLK 1201

Query: 383  TGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKTVILVV 562
              V   +R C +C   K +H   PGLL PL + D AW HI+MDF+EGLP S GK VILVV
Sbjct: 1202 KAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVV 1261

Query: 563  VDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
            VDR TKY HF+A++HP+T   V +LF++ I++LHG
Sbjct: 1262 VDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHG 1296


>gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1412

 Score =  207 bits (527), Expect = 2e-51
 Identities = 99/220 (45%), Positives = 146/220 (66%), Gaps = 1/220 (0%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRGDDKVA-CTAIATVSPKWVQRVILSYVDDPFFTKILIANTL 187
            K   +KGS N AA+ALSR+  ++++    +++ SP W+Q V   Y+ D F  ++L   TL
Sbjct: 924  KICYRKGSSNAAANALSRKYPEELSELHVVSSCSPVWLQEVSDGYLQDVFSAQLLTDLTL 983

Query: 188  DPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFY 367
            +  + P+F++ +G++R+KGR+ + N+  ++  I+S +H+S +GGHS    TY +   +F 
Sbjct: 984  NAESRPNFSLCNGVLRFKGRVWIDNNPSVQDKIISALHSSPLGGHSGFPVTYSKIKSLFA 1043

Query: 368  WPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKT 547
            WPK+K  +   V+ C +C   K DH +YPGLLQPLP+ D AW  I+MDFIEGLP SG   
Sbjct: 1044 WPKMKKQIHTAVKTCGICMQAKPDHSKYPGLLQPLPVPDGAWQIITMDFIEGLPKSGQFN 1103

Query: 548  VILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
             ILVVVD+F+KY HF  LSHPF+A  VA+ F+  +YKLHG
Sbjct: 1104 CILVVVDKFSKYSHFFPLSHPFSAIDVAQSFMVNVYKLHG 1143


>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1477

 Score =  206 bits (524), Expect = 6e-51
 Identities = 101/220 (45%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRG-DDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTL 187
            + + +KGS N AADALSR+   D     A+++ SP W+Q VI  Y  D F +++L   +L
Sbjct: 988  RIVYRKGSANSAADALSRKDLGDSAQILAVSSCSPSWLQEVIQGYEQDKFSSQLLAELSL 1047

Query: 188  DPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFY 367
            +P     + +  GLIRYKGR+ VGN++ L+  ++ E+H++  GGHS    TY R   +F 
Sbjct: 1048 NPKAREHYTLQQGLIRYKGRIWVGNNTDLQLKLIKELHDNPAGGHSGFPVTYRRIKHLFA 1107

Query: 368  WPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKT 547
            W  +K  +  Q++ C +C   K +  +YPGLLQPLP+   AW  ISMDFIEGLP S    
Sbjct: 1108 WLGMKQQIQQQLKQCQICQQAKPERVKYPGLLQPLPVPKGAWQVISMDFIEGLPTSDKYN 1167

Query: 548  VILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
             ILVVVD+F+KY HFL L+HPFTA  VA +F+  +YKLHG
Sbjct: 1168 CILVVVDKFSKYAHFLPLTHPFTAFSVATVFMKNVYKLHG 1207


>gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 897

 Score =  206 bits (523), Expect = 7e-51
 Identities = 105/220 (47%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRGD-DKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTL 187
            K   KKG +N+AADALSR    D +   A++ V P W+  V   Y  +P   ++L    L
Sbjct: 388  KLQYKKGLDNKAADALSRYPQTDPMQICALSAVVPLWLNEVQEGYKTEPATEQLLTQVLL 447

Query: 188  DPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFY 367
             P  YP + +  G++ YKGR++VG++  L+  IL+ +H SAIGGHS +  TY R   +F 
Sbjct: 448  SPDQYPHYTMQQGVLLYKGRILVGSNPALQHRILTALHASAIGGHSGIQVTYSRVKWLFA 507

Query: 368  WPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKT 547
            W  LK  V   V +C VC   K +  +YPGLLQPLP+ DQAW  +S+DFIEGLP S G  
Sbjct: 508  WTGLKRAVQTFVTDCAVCKHAKSERMRYPGLLQPLPVPDQAWETVSLDFIEGLPKSSGFD 567

Query: 548  VILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
             ILVVVD+F++Y HFL L+HPFTA  VA L+L+ +YKLHG
Sbjct: 568  CILVVVDKFSRYAHFLGLAHPFTAFDVAFLYLNNVYKLHG 607


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  202 bits (513), Expect = 1e-49
 Identities = 92/220 (41%), Positives = 143/220 (65%), Gaps = 1/220 (0%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRR-GDDKVACTAIATVSPKWVQRVILSYVDDPFFTKILIANTL 187
            K I KKG +N AADALSR  G D+V  +A++   P+W+  ++  Y  DP     +    +
Sbjct: 1072 KIIFKKGIDNSAADALSRYPGSDRVELSALSVAVPEWINDIVAGYSSDPDACSKVQTLCI 1131

Query: 188  DPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFY 367
            +    P+F++ +G++ ++ RL VG++  ++  IL+ +H +A+GGHS +  TY R   +F 
Sbjct: 1132 NSGAVPNFSLRNGVLYFQNRLWVGHNVDVQQRILANLHTAAVGGHSGIQVTYQRVKQLFA 1191

Query: 368  WPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKT 547
            WP+L+  V+  V+ C VC   K +H +YPG+LQPLP+ D AW  +S+DF+EGLP S    
Sbjct: 1192 WPRLRATVVQYVQACSVCQQAKSEHVKYPGMLQPLPVPDHAWQIVSLDFVEGLPKSASFN 1251

Query: 548  VILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
             ILVVVD+F+KY HF+ L+HPF+A  VA+ ++  I++LHG
Sbjct: 1252 CILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHRLHG 1291


>gb|AAP68381.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108710435|gb|ABF98230.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1118

 Score =  202 bits (513), Expect = 1e-49
 Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 1/220 (0%)
 Frame = +2

Query: 11   KFIIKKGSENRAADALSRRGDDKVA-CTAIATVSPKWVQRVILSYVDDPFFTKILIANTL 187
            K + +KG ENRAADALSR    ++   +A++   P W+  V  SY   P  + +L    L
Sbjct: 596  KLVYRKGVENRAADALSRCDSPEILQLSALSVCVPSWLDEVRDSYASHPHTSSLLSQVLL 655

Query: 188  DPSTYPDFNITSGLIRYKGRLVVGNDSQLRSLILSEMHNSAIGGHSRVNGTYMRANGIFY 367
             P + P F++T G++RYKGR+ +G++  L+  +L  +HN+A+G HS V  TY R   +F 
Sbjct: 656  QPESAPHFSVTDGVLRYKGRIWLGHNVGLQQKVLGALHNAAVGDHSGVQVTYTRLRRLFA 715

Query: 368  WPKLKTGVINQVRNCDVCATNKHDHGQYPGLLQPLPIQDQAWTHISMDFIEGLPNSGGKT 547
            WP LK  V   V +C +C   K +  +YPGLLQPLP+ + AW  +S+DFIEGLP S G  
Sbjct: 716  WPGLKKSVQLFVDSCSMCKQAKAERVRYPGLLQPLPVPEHAWQVVSLDFIEGLPLSLGFN 775

Query: 548  VILVVVDRFTKYGHFLALSHPFTATLVAKLFLDTIYKLHG 667
             ILVVVD+F++Y HF+AL+HPFTA  VA  ++  +YKLHG
Sbjct: 776  CILVVVDKFSRYAHFIALAHPFTAFDVALAYMQNVYKLHG 815