BLASTX nr result

ID: Rehmannia24_contig00027708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027708
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...    70   4e-10
emb|CBI37573.3| unnamed protein product [Vitis vinifera]               69   8e-10
ref|XP_004289406.1| PREDICTED: WD repeat-containing protein 44-l...    67   2e-09
gb|EMJ07522.1| hypothetical protein PRUPE_ppa002479mg [Prunus pe...    65   1e-08
ref|XP_006427812.1| hypothetical protein CICLE_v10025084mg [Citr...    64   2e-08
ref|XP_003524298.1| PREDICTED: WD repeat-containing protein 44-l...    59   9e-07
gb|EOX92455.1| Transducin/WD40 repeat-like superfamily protein, ...    57   2e-06
gb|EOX92454.1| Transducin/WD40 repeat-like superfamily protein, ...    57   2e-06
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...    57   3e-06
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207...    55   7e-06

>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +2

Query: 128 MLSVCDGEEG-FFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFLSKVG 304
           ML   +GE+  FFDS+DHL  EE V  KE+L C   DY+IW +EP+SVRERRE FL  +G
Sbjct: 1   MLRSDEGEDDVFFDSMDHLSCEESVRAKEELGCGKLDYEIWRNEPRSVRERRESFLRGMG 60

Query: 305 FLE 313
           F+E
Sbjct: 61  FVE 63


>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +2

Query: 143 DGEEG-FFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFLSKVGFLE 313
           +GE+  FFDS+DHL  EE V  KE+L C   DY+IW +EP+SVRERRE FL  +GF+E
Sbjct: 12  EGEDDVFFDSMDHLSCEESVRAKEELGCGKLDYEIWRNEPRSVRERRESFLRGMGFVE 69


>ref|XP_004289406.1| PREDICTED: WD repeat-containing protein 44-like [Fragaria vesca
           subsp. vesca]
          Length = 688

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +2

Query: 128 MLSVCDGEEG-FFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFLSKVG 304
           ML   +GE+  FFDS ++L SEE VV KE+L C   +Y+IW++EP SV++RRE FL ++G
Sbjct: 1   MLIADEGEKDLFFDSAEYLSSEESVVAKENLECSKLEYEIWVNEPPSVKDRRESFLRQMG 60

Query: 305 FLECSAT 325
             E  +T
Sbjct: 61  LAESGST 67


>gb|EMJ07522.1| hypothetical protein PRUPE_ppa002479mg [Prunus persica]
          Length = 668

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
 Frame = +2

Query: 128 MLSVCDGEEG-FFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFLSKVG 304
           MLS  DGE   FFDSVD L S+E +V KE+  C   +Y+IW++EP S++ERRE FL K+G
Sbjct: 1   MLSSDDGENDVFFDSVD-LSSQESIVAKEEPGCSKLEYEIWMNEPPSIKERRESFLRKMG 59

Query: 305 FLEC------SATMEFKRNTDDKLLSERR 373
             E       S  ME +     K++  +R
Sbjct: 60  LAEFDSAKCGSVEMEMESGALSKMMGLQR 88


>ref|XP_006427812.1| hypothetical protein CICLE_v10025084mg [Citrus clementina]
           gi|568820182|ref|XP_006464607.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X1 [Citrus
           sinensis] gi|568820184|ref|XP_006464608.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X2 [Citrus
           sinensis] gi|568820186|ref|XP_006464609.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X3 [Citrus
           sinensis] gi|568820188|ref|XP_006464610.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X4 [Citrus
           sinensis] gi|557529802|gb|ESR41052.1| hypothetical
           protein CICLE_v10025084mg [Citrus clementina]
          Length = 667

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +2

Query: 128 MLSVCDG-EEGFFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFLSKVG 304
           MLS  +G ++ FFDS D L  EE VV +E+L     DYDIW+SEP+SV+ERR+ FL K+G
Sbjct: 1   MLSSDEGVDDVFFDSTDCLSFEESVVSEEELGPGKLDYDIWMSEPRSVKERRKNFLCKMG 60

Query: 305 FLECSATMEFKRNTDDKLL 361
            +E S+  E   +   +++
Sbjct: 61  LVEFSSKNEITFDDSSQMM 79


>ref|XP_003524298.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 675

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = +2

Query: 128 MLSVCDGE-EGFFDSVDHLISEEFVVVKEDLLCRNSDYD-IWLSEPQSVRERREMFLSKV 301
           MLS  DG+ + FFDSVD L +++ V+ KE+       YD IW+ EP SV+ERRE FL  +
Sbjct: 1   MLSSDDGDMDVFFDSVDSLSTQDSVLAKEEFGSGRCGYDEIWVKEPVSVKERRERFLQGL 60

Query: 302 GFLECSATM--EFKRNTDDKLLS 364
           G  + S+ +  + K N DD  +S
Sbjct: 61  GLADSSSKVCSQEKMNLDDSSIS 83


>gb|EOX92455.1| Transducin/WD40 repeat-like superfamily protein, putative isoform 2
           [Theobroma cacao]
          Length = 445

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = +2

Query: 158 FFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFL---SKVGFLECSATM 328
           FFDS+D L  EE VV KE L   NSDY+IW++EP+SV+ERRE FL     V F + S   
Sbjct: 12  FFDSLDCLSVEEPVVAKE-LEGGNSDYEIWINEPRSVKERRECFLLGMDLVEFAKSSKIK 70

Query: 329 EFKRNTD 349
           + +R TD
Sbjct: 71  DLERITD 77


>gb|EOX92454.1| Transducin/WD40 repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 660

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = +2

Query: 158 FFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFL---SKVGFLECSATM 328
           FFDS+D L  EE VV KE L   NSDY+IW++EP+SV+ERRE FL     V F + S   
Sbjct: 12  FFDSLDCLSVEEPVVAKE-LEGGNSDYEIWINEPRSVKERRECFLLGMDLVEFAKSSKIK 70

Query: 329 EFKRNTD 349
           + +R TD
Sbjct: 71  DLERITD 77


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 654

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +2

Query: 128 MLSVCDGEEG-FFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFLSKVG 304
           ML+  +GE+  FFDSVD L  EE +V        N +Y+IWL+EPQSV+ERR+ FL ++G
Sbjct: 1   MLNFDEGEDDLFFDSVDCLSPEESIV--------NKEYEIWLNEPQSVKERRQSFLCEMG 52

Query: 305 FLE 313
             E
Sbjct: 53  LTE 55


>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
           gi|449507515|ref|XP_004163054.1| PREDICTED:
           uncharacterized LOC101207772 [Cucumis sativus]
          Length = 668

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/66 (43%), Positives = 45/66 (68%)
 Frame = +2

Query: 128 MLSVCDGEEGFFDSVDHLISEEFVVVKEDLLCRNSDYDIWLSEPQSVRERREMFLSKVGF 307
           MLS     + FFDS D+L  EE +V +E    +   Y+IW+SEPQS+++RRE FL +VGF
Sbjct: 1   MLSSDGDADVFFDSEDYLPLEESLVAEEADFSKLG-YEIWMSEPQSIKKRRERFLQEVGF 59

Query: 308 LECSAT 325
           ++ +++
Sbjct: 60  VDFASS 65


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