BLASTX nr result
ID: Rehmannia24_contig00027599
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00027599
(543 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera] 120 7e-30
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 131 6e-29
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom... 117 1e-27
gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobrom... 115 8e-27
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 115 1e-26
gb|ABF95982.1| retrotransposon protein, putative, Ty3-gypsy subc... 122 2e-26
gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor] 124 2e-26
gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi... 116 3e-26
gb|AAD27547.1|AF111709_1 polyprotein [Oryza sativa Indica Group] 121 3e-26
emb|CAH66138.1| H0616A11.2 [Oryza sativa Indica Group] 120 3e-26
gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Ja... 120 6e-26
emb|CAH66190.1| OSIGBa0144J05.2 [Oryza sativa Indica Group] 119 8e-26
emb|CAH66206.1| OSIGBa0096F13.1 [Oryza sativa Indica Group] 119 8e-26
emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa Japonica Group] 119 8e-26
gb|AAM08795.1|AC090486_5 Putative retroelement [Oryza sativa Jap... 119 8e-26
gb|ABA92051.1| retrotransposon protein, putative, Ty3-gypsy subc... 120 8e-26
gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Ja... 119 8e-26
gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group] 120 8e-26
gb|AAV43999.1| putative polyprotein [Oryza sativa Japonica Group] 120 8e-26
gb|EOY32328.1| Uncharacterized protein TCM_040115 [Theobroma cacao] 113 8e-26
>emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]
Length = 1313
Score = 120 bits (300), Expect(3) = 7e-30
Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
+ +S+ E +RFK ++C D LRN++L +A + ++Y+IHPG+ KM++DLK+ FWW
Sbjct: 864 ENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHR-AKYTIHPGNTKMYQDLKRQFWWSG 922
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
MK+ + A CQ+VK EHQRP+GLL PL IPE KW+ ITMDF GL T
Sbjct: 923 MKRDIAQFVANFQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPRTRSKKNGV 982
Query: 344 --------KITHSLSIKKTDSLQKLA 397
K H L++K TDS+ LA
Sbjct: 983 WVIVDCLTKSAHFLAMKTTDSMNSLA 1008
Score = 32.7 bits (73), Expect(3) = 7e-30
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 402 IYIREIVRLHGVLADNVSDR 461
+YI+EIVRLHG+L VSDR
Sbjct: 1010 LYIQEIVRLHGILVSIVSDR 1029
Score = 23.9 bits (50), Expect(3) = 7e-30
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 502 GMTLSFNTSAHPQT 543
G L+FNT+ HPQT
Sbjct: 1046 GTQLNFNTAFHPQT 1059
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 131 bits (329), Expect(2) = 6e-29
Identities = 76/183 (41%), Positives = 96/183 (52%), Gaps = 17/183 (9%)
Frame = +2
Query: 8 FSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMK 187
FS E + F N++C N + L+ IL EA + S YSIHPG KM++DLK+ +WWV+MK
Sbjct: 605 FSEDEQGTVWFGNRICVPNQQELKQSILKEAHE-SPYSIHPGSTKMYQDLKEKYWWVSMK 663
Query: 188 KSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH-------- 343
+ A C CQRVK EHQRP+GLL PL IPE KWE I MDF GL T
Sbjct: 664 REIAEFVAHCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTQTGCDSIWV 723
Query: 344 ------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCLHE 496
K+ H + +K T KLA +LY ++ R R WK LHE
Sbjct: 724 IIDRLTKVAHFIPVKTTYQSSKLA-ELYVAKIVCLHGVPKKIVSDRGSQFTSRFWKSLHE 782
Query: 497 KMG 505
+G
Sbjct: 783 ALG 785
Score = 21.9 bits (45), Expect(2) = 6e-29
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 502 GMTLSFNTSAHPQT 543
G L+F+T+ HPQT
Sbjct: 785 GTRLNFSTAYHPQT 798
>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1537
Score = 117 bits (293), Expect(3) = 1e-27
Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 14/145 (9%)
Frame = +2
Query: 5 EFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNM 184
EF +++ L ++++C D+ LR IL EA +S Y++HPG KM++ +K+ +WW M
Sbjct: 1073 EFRLSDDGTLMLRDRICVPKDDQLRRAILEEAH-YSAYALHPGSTKMYRTIKESYWWPGM 1131
Query: 185 KKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------- 343
++ A+CLTCQ++K EHQ+PSG L PL IPE KWE +TMDF GL T
Sbjct: 1132 ERDIAEFVAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMDFVLGLPRTQSGKDAIW 1191
Query: 344 -------KITHSLSIKKTDSLQKLA 397
K H L+I T S+++LA
Sbjct: 1192 VIVDRLTKSAHFLAIHSTYSIERLA 1216
Score = 30.4 bits (67), Expect(3) = 1e-27
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3
Query: 402 IYIREIVRLHGVLADNVSDRGL 467
+YI EIVRLHGV VSDR L
Sbjct: 1218 LYIDEIVRLHGVPVSIVSDRDL 1239
Score = 21.2 bits (43), Expect(3) = 1e-27
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 502 GMTLSFNTSAHPQT 543
G L F+T+ HPQT
Sbjct: 1254 GTKLRFSTAFHPQT 1267
>gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 811
Score = 115 bits (288), Expect(3) = 8e-27
Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 14/145 (9%)
Frame = +2
Query: 5 EFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNM 184
EF +++ L ++++C D+ LR IL EA S Y++HPG KM++ +K+ +WW M
Sbjct: 474 EFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHS-SAYALHPGSTKMYRTIKESYWWPGM 532
Query: 185 KKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------- 343
K+ + A+CLTCQ++K EHQ+ SG L PL IPE KWE +TMDF GL T
Sbjct: 533 KRDIAKFVAKCLTCQQIKAEHQKSSGTLQPLPIPEWKWEHVTMDFVLGLPRTQSGKDAIW 592
Query: 344 -------KITHSLSIKKTDSLQKLA 397
K H L+I T S+++LA
Sbjct: 593 VIVDRLTKSAHFLAIHSTYSIERLA 617
Score = 28.5 bits (62), Expect(3) = 8e-27
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 402 IYIREIVRLHGVLADNVSDR 461
+YI E+VRLHGV VSDR
Sbjct: 619 LYIDEVVRLHGVPISIVSDR 638
Score = 22.3 bits (46), Expect(3) = 8e-27
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 502 GMTLSFNTSAHPQT 543
G L F+TS HPQT
Sbjct: 655 GTKLRFSTSFHPQT 668
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 115 bits (287), Expect(3) = 1e-26
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 14/146 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
+ +S+ E +RFK ++C D LRN++L +A + ++Y+IHPG+ KM++DLK+ F W
Sbjct: 1170 ENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHR-AKYTIHPGNTKMYQDLKRQFXWSG 1228
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
MK+ + A C CQ+VK EHQRP+ LL PL IP+ KW+ ITMDF GL T
Sbjct: 1229 MKRDIAQFVANCQICQQVKAEHQRPAELLQPLPIPKWKWDNITMDFVIGLPRTRSKKNGV 1288
Query: 344 --------KITHSLSIKKTDSLQKLA 397
K H L++K TDS+ LA
Sbjct: 1289 WVIVDRLTKSAHFLAMKTTDSMNSLA 1314
Score = 30.0 bits (66), Expect(3) = 1e-26
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 402 IYIREIVRLHGVLADNVSDR 461
+YI+EIVRLHG+ VSDR
Sbjct: 1316 LYIQEIVRLHGIPVSIVSDR 1335
Score = 20.8 bits (42), Expect(3) = 1e-26
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 502 GMTLSFNTSAHPQT 543
G L+F+T HPQT
Sbjct: 1352 GTQLNFSTVFHPQT 1365
>gb|ABF95982.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1724
Score = 122 bits (306), Expect(2) = 2e-26
Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ +R ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1306 RDFHEDEHGTIRMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1364
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1365 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1424
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY ++ R + W+ L
Sbjct: 1425 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPKKIVSNRGSQFTSKFWQIL 1483
Query: 491 HEKMG 505
E++G
Sbjct: 1484 QEELG 1488
Score = 22.7 bits (47), Expect(2) = 2e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1486 ELGTRLNFSTAYHPQT 1501
>gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor]
Length = 924
Score = 124 bits (310), Expect = 2e-26
Identities = 75/184 (40%), Positives = 96/184 (52%), Gaps = 17/184 (9%)
Frame = +2
Query: 5 EFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNM 184
EF V E KN++C +DE LR +IL EA SRY IHPG KM+ DL++ FWW +M
Sbjct: 473 EFRVDERGTYWCKNRICVPSDEPLREEILSEAHD-SRYCIHPGSTKMYADLRKVFWWKDM 531
Query: 185 KKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*T-------- 340
+K ARC TC RVK EHQRP+GLL PL +PE KWE I+MDF GL +
Sbjct: 532 RKDIAGHVARCDTCNRVKAEHQRPAGLLKPLDVPEWKWEGISMDFIVGLPRSPKGHDSIW 591
Query: 341 ------HKITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCLH 493
K+ H + +K ++LA DLY R V R W+ LH
Sbjct: 592 VIVDRLTKVAHFIPVKTVYRTEQLA-DLYVDHILRLHGAPTSIISDRGPQWVSRFWQSLH 650
Query: 494 EKMG 505
+ +G
Sbjct: 651 KAIG 654
>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1611
Score = 116 bits (290), Expect(2) = 3e-26
Identities = 63/131 (48%), Positives = 79/131 (60%)
Frame = +2
Query: 5 EFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNM 184
E+ + + +VC ND L+ +IL EA Q S++SIHPG NKM++DLK+++ WV M
Sbjct: 1136 EYQTSNNGTIVVNGRVCVPNDRALKEEILREAHQ-SKFSIHPGSNKMYRDLKRYYHWVGM 1194
Query: 185 KKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*THKITHSLS 364
KK R A+C TCQ VK EHQ PSGLL L IPE KW+ ITMDF GL K H+
Sbjct: 1195 KKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAV 1254
Query: 365 IKKTDSLQKLA 397
D L K A
Sbjct: 1255 WVVVDRLTKSA 1265
Score = 28.1 bits (61), Expect(2) = 3e-26
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 405 YIREIVRLHGVLADNVSDR 461
YI EIVRLHG+ VSDR
Sbjct: 1283 YIDEIVRLHGIPVSIVSDR 1301
>gb|AAD27547.1|AF111709_1 polyprotein [Oryza sativa Indica Group]
Length = 1521
Score = 121 bits (303), Expect(2) = 3e-26
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1063 RDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1121
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1122 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1181
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + ++ T + ++LA +LY R+ R + W+ L
Sbjct: 1182 WVVVDRLTKVAHFIPVQTTYTGKRLA-ELYLARIMCLHGVPRKIVSDRGSQFTSKFWQKL 1240
Query: 491 HEKMG 505
E+MG
Sbjct: 1241 QEEMG 1245
Score = 23.1 bits (48), Expect(2) = 3e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1243 EMGTRLNFSTAYHPQT 1258
>emb|CAH66138.1| H0616A11.2 [Oryza sativa Indica Group]
Length = 1510
Score = 120 bits (302), Expect(2) = 3e-26
Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1052 RDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1110
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1111 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1170
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY R+ R + W+ L
Sbjct: 1171 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPRKIVSDRGSQFTSKFWQKL 1229
Query: 491 HEKMG 505
E+MG
Sbjct: 1230 QEEMG 1234
Score = 23.1 bits (48), Expect(2) = 3e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1232 EMGTRLNFSTAYHPQT 1247
>gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431025|gb|AAP52863.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1714
Score = 120 bits (301), Expect(2) = 6e-26
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C ND+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1256 RDFHEDEHGTIWMGERLCVPNDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1314
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1315 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSLGHDSI 1374
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY ++ R + W+ L
Sbjct: 1375 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKL 1433
Query: 491 HEKMG 505
E++G
Sbjct: 1434 QEELG 1438
Score = 22.7 bits (47), Expect(2) = 6e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1436 ELGTRLNFSTAYHPQT 1451
>emb|CAH66190.1| OSIGBa0144J05.2 [Oryza sativa Indica Group]
Length = 1827
Score = 119 bits (299), Expect(2) = 8e-26
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1369 RDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1427
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1428 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1487
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY ++ R + W+ L
Sbjct: 1488 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKL 1546
Query: 491 HEKMG 505
E+MG
Sbjct: 1547 QEEMG 1551
Score = 23.1 bits (48), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1549 EMGTRLNFSTAYHPQT 1564
>emb|CAH66206.1| OSIGBa0096F13.1 [Oryza sativa Indica Group]
Length = 1827
Score = 119 bits (299), Expect(2) = 8e-26
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1369 RDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1427
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1428 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1487
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY ++ R + W+ L
Sbjct: 1488 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKL 1546
Query: 491 HEKMG 505
E+MG
Sbjct: 1547 QEEMG 1551
Score = 23.1 bits (48), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1549 EMGTRLNFSTAYHPQT 1564
>emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa Japonica Group]
Length = 1827
Score = 119 bits (299), Expect(2) = 8e-26
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1369 RDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1427
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1428 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1487
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY ++ R + W+ L
Sbjct: 1488 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKL 1546
Query: 491 HEKMG 505
E+MG
Sbjct: 1547 QEEMG 1551
Score = 23.1 bits (48), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1549 EMGTRLNFSTAYHPQT 1564
>gb|AAM08795.1|AC090486_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431148|gb|AAP52970.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1785
Score = 119 bits (299), Expect(2) = 8e-26
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1327 RDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1385
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1386 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1445
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY ++ R + W+ L
Sbjct: 1446 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKL 1504
Query: 491 HEKMG 505
E+MG
Sbjct: 1505 QEEMG 1509
Score = 23.1 bits (48), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1507 EMGTRLNFSTAYHPQT 1522
>gb|ABA92051.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 120 bits (300), Expect(2) = 8e-26
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1319 RDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKERFWWVS 1377
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1378 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1437
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY R+ R + W+ L
Sbjct: 1438 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLARIMCLHGVPRKIVSDRGSQFTSKFWQKL 1496
Query: 491 HEKMG 505
E++G
Sbjct: 1497 QEELG 1501
Score = 22.7 bits (47), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1499 ELGTRLNFSTAYHPQT 1514
>gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Japonica Group]
gi|19881702|gb|AAM01103.1|AC098682_7 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431123|gb|AAP52945.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1777
Score = 119 bits (299), Expect(2) = 8e-26
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+
Sbjct: 1319 RDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVS 1377
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1378 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1437
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCL 490
K+ H + + T + ++LA +LY ++ R + W+ L
Sbjct: 1438 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKL 1496
Query: 491 HEKMG 505
E+MG
Sbjct: 1497 QEEMG 1501
Score = 23.1 bits (48), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1499 EMGTRLNFSTAYHPQT 1514
>gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1495
Score = 120 bits (300), Expect(2) = 8e-26
Identities = 69/185 (37%), Positives = 103/185 (55%), Gaps = 17/185 (9%)
Frame = +2
Query: 2 QEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVN 181
++F E+ + + ++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWW +
Sbjct: 1037 RDFHEDEHGTIWLRERLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWAS 1095
Query: 182 MKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------ 343
M++ A C CQRVK EHQRP+GLL PLQIPE KWE I MDF GL T
Sbjct: 1096 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1155
Query: 344 --------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQRLVQ---RVWKCL 490
K+ H + + T + ++LA +LY ++ R +Q + W+ L
Sbjct: 1156 WVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLSRIMCLHGVRKKIVSDRGIQFTSKFWQKL 1214
Query: 491 HEKMG 505
E++G
Sbjct: 1215 QEELG 1219
Score = 22.7 bits (47), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1217 ELGTRLNFSTAYHPQT 1232
>gb|AAV43999.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1092
Score = 120 bits (300), Expect(2) = 8e-26
Identities = 73/183 (39%), Positives = 96/183 (52%), Gaps = 17/183 (9%)
Frame = +2
Query: 8 FSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMK 187
F+ E+R L N+VC +D L+ IL EA + S YSIHPG KM+ DLK +WWV+MK
Sbjct: 829 FTEDEHRTLWNGNRVCVPDDRELKQLILQEAHE-SPYSIHPGSTKMYLDLKGKYWWVSMK 887
Query: 188 KSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH-------- 343
+ A C CQRVK EHQRP+GLL PLQ+PE KW+ I MDF GL T
Sbjct: 888 REIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWV 947
Query: 344 ------KITHSLSIKKTDSLQKLAIDLYPRDCTAARSTSRQCFRQR---LVQRVWKCLHE 496
K+ + +K T KLA +LY + ++ R +WK L E
Sbjct: 948 VVDRLTKVARFILVKTTYGGNKLA-ELYFARIVSLHGVPKKIVSDRGSQFTSHIWKKLQE 1006
Query: 497 KMG 505
++G
Sbjct: 1007 ELG 1009
Score = 22.7 bits (47), Expect(2) = 8e-26
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 496 ENGMTLSFNTSAHPQT 543
E G L+F+T+ HPQT
Sbjct: 1007 ELGTRLNFSTAYHPQT 1022
>gb|EOY32328.1| Uncharacterized protein TCM_040115 [Theobroma cacao]
Length = 363
Score = 113 bits (283), Expect(2) = 8e-26
Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 14/145 (9%)
Frame = +2
Query: 5 EFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNM 184
EF E +L F+++VC + LR I+ +A S Y++HPG KM++ +++++WW M
Sbjct: 187 EFRFGEDNVLMFRDRVCVPEENQLRQAIMEKAHS-STYALHPGSTKMYRTIRENYWWPGM 245
Query: 185 KKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH------- 343
K+ A+CL CQ+VK EHQRP+G L L +PE KWE +TMDF GL T
Sbjct: 246 KRDVAEFVAKCLVCQQVKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLPRTQRGKDAIW 305
Query: 344 -------KITHSLSIKKTDSLQKLA 397
K H L++ T S++KLA
Sbjct: 306 VIVDRLTKSAHFLAVHSTYSIEKLA 330
Score = 29.3 bits (64), Expect(2) = 8e-26
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 402 IYIREIVRLHGVLADNVSDR 461
+YI EIVRLHGV VSDR
Sbjct: 332 LYIDEIVRLHGVPVSIVSDR 351