BLASTX nr result
ID: Rehmannia24_contig00027527
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00027527
(613 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625... 149 6e-34
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616... 146 5e-33
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 142 6e-32
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A... 128 1e-27
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616... 126 5e-27
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 125 1e-26
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm... 117 3e-24
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355... 116 6e-24
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ... 115 7e-24
ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A... 107 2e-21
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 105 7e-21
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 102 6e-20
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 102 6e-20
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici... 102 6e-20
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ... 100 3e-19
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ... 100 3e-19
ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein A... 99 7e-19
gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao] 98 2e-18
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 97 5e-18
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ... 96 8e-18
>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
Length = 412
Score = 149 bits (376), Expect = 6e-34
Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W+ LW+ KVP K KN +WRA HN LPT LIS+RV + +C VCN ET H C
Sbjct: 170 WRKLWNSKVPNKVKNFIWRAAHNVLPTALNLISKRVDVPAMCSVCNAYEETVLHSLVACS 229
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQQS 207
AK+CW VG ++FL +++ S + + +M+ W +W NRNN VWN +
Sbjct: 230 FAKSCWTS-SSVGFVGYCSNFLDWLAHVFTRCSKDECNTAMMICWRIWVNRNNKVWNNTT 288
Query: 206 NSPSQIVNMVVSMLLQWQVA--QTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAALFFS 33
+S QI+N L QWQ A Q + D + GA+ W++PK G +KCNVDAA+F S
Sbjct: 289 SSVCQILNSAGQFLYQWQAAKQQVFDVNDDTHRLVHGALCWEQPKFGWVKCNVDAAVFES 348
Query: 32 TSEVGVAGIL 3
++G+ ++
Sbjct: 349 QGKIGIGCVI 358
>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
Length = 977
Score = 146 bits (368), Expect = 5e-33
Identities = 79/182 (43%), Positives = 105/182 (57%), Gaps = 4/182 (2%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W+ LW+L V K KN VWRA N LPT LIS+RV++ P C VC + ET H C
Sbjct: 799 WRKLWNLNVAHKVKNFVWRAATNVLPTAVNLISKRVNIPPTCAVCLASDETALHSLVECN 858
Query: 386 CAKACWERILIVGDYVEHT-SFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQQ 210
AKACW I +V H SFL + I++ S E +M+ W +W NRN+ VWN +
Sbjct: 859 VAKACW--ISSSVGFVGHCYSFLEWLDHIFTRCSKEECHVAMMICWRVWINRNDKVWNNK 916
Query: 209 SNSPSQIVNMVVSMLLQWQVAQTSNF---VDWSLLPSDGAVIWQKPKQGTLKCNVDAALF 39
+ S +Q++N +L QWQVA+ F D L GA+ W++PK G +KCNVDAA+F
Sbjct: 917 TGSVNQVLNSAGQLLYQWQVAKKQQFYADADVHKLVY-GAICWERPKFGWVKCNVDAAMF 975
Query: 38 FS 33
S
Sbjct: 976 SS 977
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 142 bits (359), Expect = 6e-32
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W LW L+VP+K K+ +WRA + LPT E L+ + V + P C C+ ++E+ H+ CP
Sbjct: 123 WNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILLQCP 182
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQQS 207
A+ CW +G + + ++ L +++ S+E +M+ W+LW+NRN++VW ++
Sbjct: 183 FARTCW-MTSSIGFFGDGSNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMVWRGKT 241
Query: 206 NSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLP-SDGAVIWQKPKQGTLKCNVDAALFFST 30
+ Q++N L QWQ+ + F+ P GA+ W+ P G LKCNVD ALF
Sbjct: 242 SGVQQLLNSAGHFLFQWQLVRKQQFLFSQPSPIGHGAICWEPPVAGRLKCNVDVALFAFR 301
Query: 29 SEVGVAGIL 3
+G ++
Sbjct: 302 GYIGFGNVI 310
>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 459
Score = 128 bits (321), Expect = 1e-27
Identities = 67/188 (35%), Positives = 96/188 (51%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W+ +W L+VPAK +N VWRA N LPT L S+ V L+ LC V N ET H+ CP
Sbjct: 170 WRKIWKLEVPAKVRNFVWRAASNVLPTAVNLRSKHVSLNDLCLVGNFDKETVLHLLVDCP 229
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQQS 207
A++CW + VG + ++SF ++ + + E +MV W LW NRNN+VW +
Sbjct: 230 FARSCWIKSK-VGFFGIYSSFKDWLQALFRNCTNEQCWIAVMVCWKLWCNRNNLVWQGKC 288
Query: 206 NSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAALFFSTS 27
++ QIVN GAV W P+ G LKCN+DA +F +
Sbjct: 289 DTTKQIVNAA----------------------GVGAVAWSPPRVGWLKCNIDATVFANEG 326
Query: 26 EVGVAGIL 3
VG+ ++
Sbjct: 327 RVGLGSVI 334
>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
Length = 510
Score = 126 bits (316), Expect = 5e-27
Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 1/189 (0%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W+ +W LKVPAK K+ +W A N LPT + L +V + +CP+CN E AH +C
Sbjct: 196 WQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNCS 255
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQQS 207
AK+CW + +G +F+ I+S S + M W+LW+N+N VW +
Sbjct: 256 FAKSCW-LLSPIGYVGGCENFMDWLEGIFSRYSSDDCDLAAMTCWSLWENKNAKVWKNRK 314
Query: 206 NSPSQIVNMVVSMLLQWQ-VAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAALFFST 30
S ++N+ +L QW+ V + F + S+ S GAV WQ+P KCNVDA F S+
Sbjct: 315 GRLSSVLNLAGQVLFQWKSVRKLQVFDNNSVSSSHGAVCWQRPCVWWFKCNVDATTFLSS 374
Query: 29 SEVGVAGIL 3
+ ++
Sbjct: 375 GTIMYGAVI 383
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 125 bits (313), Expect = 1e-26
Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Frame = -3
Query: 569 DWKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHC 390
+W LW+LKVP K K +WR+C NALPT+ RL R V+ + C +C E + H+FF+C
Sbjct: 1416 NWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYC 1475
Query: 389 PCAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKS--QVI--MVMWALWKNRNNIV 222
++ CW+++ + + F ++ E+ S +VI VMW++WK RN+ +
Sbjct: 1476 TKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCI 1535
Query: 221 WNQQSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAAL 42
W + + + + + +++L WQ AQ IW+KP +G KCNVDAA
Sbjct: 1536 WRNEVMTTAAVRDRGLNLLTGWQNAQD---------------IWRKPDEGHFKCNVDAAF 1580
Query: 41 FFSTSEVGV 15
F ++ VG+
Sbjct: 1581 FKESNRVGI 1589
>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
gi|223541858|gb|EEF43404.1| conserved hypothetical
protein [Ricinus communis]
Length = 668
Score = 117 bits (292), Expect = 3e-24
Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W W LK+P K +NL+W+ C N + T L R V L PLC CN ET HV F C
Sbjct: 428 WNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCS 487
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQQS 207
A+ CW+ + + + S + D + +++ +V +LW RN+ VWN+QS
Sbjct: 488 MARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQS 547
Query: 206 NSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLP-----SDGAVIWQKPKQGTLKCNVDAAL 42
N+ +++ +L Q AQ++ D + P +D W KP+ G LK N D AL
Sbjct: 548 NTTYGVISPANQLLEQRTRAQSA---DEEIAPPLGHNTDVTRKWTKPELGWLKINTDTAL 604
Query: 41 FFSTSEVGVAGIL 3
F +G+ ++
Sbjct: 605 FLKQGRIGLGCVV 617
>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
Cytochrome P450 [Medicago truncatula]
Length = 687
Score = 116 bits (290), Expect = 6e-24
Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Frame = -3
Query: 569 DWKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHC 390
+W +W LK+P K KN +WRAC N LPT+ RL S+ V C VC+ E + H+FF C
Sbjct: 365 NWNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMC 424
Query: 389 PCAKACWERI----LIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIV 222
+ W+RI ++ + + SF + I L + K + +W++WK+RNN V
Sbjct: 425 SKSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKV 484
Query: 221 WNQQSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAAL 42
WN +++ I S+L W+ AQ + + W KP G CNVDA+
Sbjct: 485 WNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPNDLKWVKPSPGRFTCNVDASF 544
Query: 41 FFSTSEVGV 15
+ + VG+
Sbjct: 545 SQARNRVGI 553
>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 393
Score = 115 bits (289), Expect = 7e-24
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W +W LKVP + K LVWR C PT+ RLISR V+ C C E H+FFHC
Sbjct: 56 WSGIWRLKVPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCR 115
Query: 386 CAKACWERI----LIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVW 219
A W LI + + + LS ++ +MW++WK+RN +W
Sbjct: 116 TAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLW 175
Query: 218 NQQSNSPSQIVNMVVSMLLQWQVA-QTSNFVDWSLLPSD---------------GAVIWQ 87
Q S S I+ +L W+ A + P++ G + W+
Sbjct: 176 QQVSESSVTILERAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRWR 235
Query: 86 KPKQGTLKCNVDAALFFSTSEVGV 15
KPK G LKCNVDA+ S+++VG+
Sbjct: 236 KPKSGRLKCNVDASFSTSSNKVGI 259
>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 498
Score = 107 bits (268), Expect = 2e-21
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
WK LW +VP K + WRACH+ LPT+ +L+++ + C C ETTAH+ CP
Sbjct: 178 WKKLWKARVPGKVMHCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACP 237
Query: 386 CAKACWERILIVGDYVEHTSFL-SCFN-RIW-----SDLSVEMKSQVIMVMWALWKNRNN 228
A+ +++G ++ T + S FN + W + LS + +++M++W LW+NRNN
Sbjct: 238 IAQT-----ILLGSHLNITVLMSSIFNFKEWMLEQATSLSDDKFQKLLMIIWGLWRNRNN 292
Query: 227 IVWNQQSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDA 48
++W+ + + +I+ +S ++ T N+ + V W P LK NVD
Sbjct: 293 MLWSDKQQTAQEIICGTMSWYHEF---TTINYPQQKPSKTSQRVKWFPPAVDHLKLNVDG 349
Query: 47 ALFFSTSEVGVAGIL 3
A + +E GV GIL
Sbjct: 350 AFMPNETEGGVGGIL 364
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 105 bits (263), Expect = 7e-21
Identities = 60/190 (31%), Positives = 84/190 (44%)
Frame = -3
Query: 587 DFTDFFDWKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTA 408
D F W LW + P K N WRA N LPT+ L R V CP+C ETT
Sbjct: 501 DVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTL 560
Query: 407 HVFFHCPCAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNN 228
H C A+ W+ + SF+ +++ + ++ + V W LW RN+
Sbjct: 561 HALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRND 620
Query: 227 IVWNQQSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDA 48
+VWN + Q+VN +ML W A +PS + WQKP G +K NVD
Sbjct: 621 VVWNGRIWHSQQVVNGCFTMLESWFHA-NETLATAVTVPSYSSK-WQKPDYGWIKINVDG 678
Query: 47 ALFFSTSEVG 18
A+F +G
Sbjct: 679 AVFPDKGAIG 688
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 102 bits (255), Expect = 6e-20
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
WK W L +P K K +WRA N LPT E L RR P+C C L ET +HV C
Sbjct: 1133 WKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECK 1192
Query: 386 CAKACWERI-LIVGDYVEHT-SFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQ 213
A+ W+ LIV +H F S +WS S +I+ W +W RN ++
Sbjct: 1193 AARKIWDLAPLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEG 1252
Query: 212 QSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAALFFS 33
+ + + S+L +Q V + W+ P Q LK NVDAA+
Sbjct: 1253 KKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTK 1312
Query: 32 TSEVGVAGIL 3
+VG+ I+
Sbjct: 1313 DQKVGLGAIV 1322
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 102 bits (255), Expect = 6e-20
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
WK W L +P K K +WRA N LPT E L RR P+C C L ET +HV C
Sbjct: 446 WKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECK 505
Query: 386 CAKACWERI-LIVGDYVEHT-SFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQ 213
A+ W+ LIV +H F S +WS S +I+ W +W RN ++
Sbjct: 506 AARKIWDLAPLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEG 565
Query: 212 QSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAALFFS 33
+ + + S+L +Q V + W+ P Q LK NVDAA+
Sbjct: 566 KKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTK 625
Query: 32 TSEVGVAGIL 3
+VG+ I+
Sbjct: 626 XQKVGLGAIV 635
>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538337|gb|EEF39944.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 483
Score = 102 bits (255), Expect = 6e-20
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W+ LW L + AK K +WRA N LP + L+ R+V CP C ET H+ C
Sbjct: 184 WRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCD 243
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVWNQQS 207
W+ + + + ++ L ++ + + +++ W+LW N N++VWN +
Sbjct: 244 VTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVVWNGKK 303
Query: 206 NSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLP---SDGAVIWQKPKQGTLKCNVDAALFF 36
S + + S L QW A+ D+ L + G +WQKP G K NVDA+
Sbjct: 304 LSWRAVASRASSFLFQWGKAR--KLTDYHQLGRHFAGGDCLWQKPATGKYKLNVDAS--- 358
Query: 35 STSEVGVAG 9
S++E G +G
Sbjct: 359 SSAERGKSG 367
>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 519
Score = 100 bits (249), Expect = 3e-19
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W +W LKVP K KN +WR C LPT+ +L + V C C+ +E H+F C
Sbjct: 168 WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 227
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEM---KSQVIMVMWALWKNRNNIVWN 216
W+ + + + + + DL +SQ+ + MW+LWK RN VW
Sbjct: 228 FDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWE 287
Query: 215 QQSNSPSQIVNMVVSMLLQWQVAQTSN--------------------------------- 135
++ S + V+ M+ +WQ+A +
Sbjct: 288 NKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVASA 347
Query: 134 -FVDWSLLPSDGAVIWQKPKQGTLKCNVDAALFFSTSEVGV 15
SL+PS + W++P +G KCNVDA S + +G+
Sbjct: 348 VSAQQSLVPS---ISWERPSRGRFKCNVDAGFSTSKNRIGI 385
>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 612
Score = 100 bits (249), Expect = 3e-19
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W +W LKVP K KN +WR C LPT+ +L + V C C+ +E H+F C
Sbjct: 261 WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 320
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEM---KSQVIMVMWALWKNRNNIVWN 216
W+ + + + + + DL +SQ+ + MW+LWK RN VW
Sbjct: 321 FDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWE 380
Query: 215 QQSNSPSQIVNMVVSMLLQWQVAQTSN--------------------------------- 135
++ S + V+ M+ +WQ+A +
Sbjct: 381 NKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVASA 440
Query: 134 -FVDWSLLPSDGAVIWQKPKQGTLKCNVDAALFFSTSEVGV 15
SL+PS + W++P +G KCNVDA S + +G+
Sbjct: 441 VSAQQSLVPS---ISWERPSRGRFKCNVDAGFSTSKNRIGI 478
>ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 249
Score = 99.4 bits (246), Expect = 7e-19
Identities = 61/190 (32%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
WK LW L+VP K K +WRA LPT+ RL ++ V + +CP+C E H CP
Sbjct: 16 WKDLWKLQVPNKVKVFLWRAVRGCLPTRLRLQTKGVVCTGICPLCLNNLENEWHCLVACP 75
Query: 386 CAKACWERI----LIVGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVW 219
CW+ +I SF R+ + +S SQV+M+MW LW N VW
Sbjct: 76 SNLVCWKLAGFWNVIRVQVDSADSFDDLIFRLLASISKAKISQVVMLMWVLWWRSNGKVW 135
Query: 218 NQQSNSPSQIVNMVVSMLLQWQVA--QTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAA 45
SPS V + L W + + + P W KP KCN+DAA
Sbjct: 136 EDADRSPSVTVRRATNCLTDWGKCHRRRVSVPQRQISPPQ----WVKPPLVFAKCNLDAA 191
Query: 44 LFFSTSEVGV 15
+F + G+
Sbjct: 192 VFGNQRRFGL 201
>gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]
Length = 290
Score = 98.2 bits (243), Expect = 2e-18
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
WK LW VP K+ +W+ H+ LPT+ LI R V++ +CP+C + ET H +C
Sbjct: 62 WKKLWHCAVPRKTMLFMWKVIHDILPTRSELIKRGVNIELMCPLCEIEVETAFHCLCNCQ 121
Query: 386 CAKACWERILI----VGDYVEHTSFLSCFNRIWSDLSVEMKSQVIMVMWALWKNRNNIVW 219
++ W + ++ H S + ++ L+ + + I ++WA+WK RN +V+
Sbjct: 122 FSRLVWLTTKCGFRDISNF--HDSIIDWLQGVFEVLNKDETEEFICLLWAIWKTRNVVVF 179
Query: 218 NQQSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAALF 39
NQ ++P +V + + ++ Q++ A ++ + + +W + + K N DAALF
Sbjct: 180 NQSRSTPMVVVEIGLDLIHQFRRASRAHGNSKDDGYENTSEVW--GRLNSAKLNTDAALF 237
Query: 38 FSTSE 24
S E
Sbjct: 238 HSGGE 242
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 96.7 bits (239), Expect = 5e-18
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Frame = -3
Query: 560 SLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCPCA 381
+LW L + K K ++WR ALPT+ RL++R + + P CP C ET HV F CP A
Sbjct: 1361 TLWKLPIIPKIKYMLWRTISKALPTRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYA 1420
Query: 380 KACW--------ERILIVGDYVEHTSFL-SCFNRIWSDLSVEMKSQVIMVMWALWKNRNN 228
+ W D E+ SFL + F+ + L+ E + ++W LWK RNN
Sbjct: 1421 ASIWGLSNFPWLPGHTFSQDTEENISFLINSFSN--NTLNTEQRLAPFWLIWRLWKARNN 1478
Query: 227 IVWNQQSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSD---GAVIWQKPKQGTLKCN 57
+V+N+ S S S++V + + +W + + D S+L V W+KP +KCN
Sbjct: 1479 LVFNKFSESCSRVVTQTEAEVNEW-LQSVNRREDASVLTRSSHRANVRWKKPVFPLVKCN 1537
Query: 56 VDA 48
DA
Sbjct: 1538 FDA 1540
>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 355
Score = 95.9 bits (237), Expect = 8e-18
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Frame = -3
Query: 566 WKSLWSLKVPAKSKNLVWRACHNALPTKERLISRRVHLSPLCPVCNLATETTAHVFFHCP 387
W ++W+L +P + + +WR HN LPT+ L +R + C + E H+FF C
Sbjct: 115 WMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTHLFFVCA 174
Query: 386 CAKACWERILIVGDYVEHTSFLSCFNRIWSDLSVEMKSQ----VIMVMWALWKNRNNIVW 219
A CW+ I + E + F + D + SQ M++W+LWK+RN +W
Sbjct: 175 KAMDCWKNIGLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQAAGMLLWSLWKSRNIKLW 234
Query: 218 NQQSNSPSQIVNMVVSMLLQWQVAQTSNFVDWSLLPSDGAVIWQKPKQGTLKCNVDAALF 39
+ + + ++ L +W Q++ + + + W KP G +KCN+DAA+F
Sbjct: 235 DSTDTTTAITISRAKDTLHEWSCMQSAK---TQPINPNHHISWVKPTGGMIKCNMDAAIF 291
Query: 38 FSTSEVG 18
+ G
Sbjct: 292 QNNVAAG 298