BLASTX nr result
ID: Rehmannia24_contig00027412
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00027412
(580 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359387.1| PREDICTED: DNA mismatch repair protein PMS1-... 180 1e-55
ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1... 181 9e-54
gb|EMJ00930.1| hypothetical protein PRUPE_ppa002523mg [Prunus pe... 178 1e-48
emb|CBI36837.3| unnamed protein product [Vitis vinifera] 172 3e-48
ref|NP_567236.1| DNA mismatch repair protein PMS1 [Arabidopsis t... 165 1e-46
ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arab... 165 2e-46
ref|XP_003536886.1| PREDICTED: DNA mismatch repair protein PMS1-... 167 3e-45
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2... 172 3e-45
ref|XP_006396455.1| hypothetical protein EUTSA_v10028404mg [Eutr... 164 3e-45
ref|XP_006575115.1| PREDICTED: DNA mismatch repair protein PMS1-... 167 5e-45
ref|XP_003591551.1| DNA mismatch repair protein [Medicago trunca... 167 6e-45
gb|EPS64298.1| hypothetical protein M569_10482, partial [Genlise... 168 6e-45
ref|XP_006480112.1| PREDICTED: DNA mismatch repair protein PMS1-... 183 2e-44
ref|XP_006444299.1| hypothetical protein CICLE_v100188991mg, par... 183 2e-44
ref|XP_006287017.1| hypothetical protein CARUB_v10000165mg [Caps... 161 5e-44
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] 157 9e-44
ref|XP_004292655.1| PREDICTED: mismatch repair endonuclease PMS2... 181 1e-43
gb|EXB36415.1| Mismatch repair endonuclease PMS2 [Morus notabilis] 177 1e-42
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2... 171 2e-42
ref|XP_002321013.1| DNA mismatch repair family protein [Populus ... 177 2e-42
>ref|XP_006359387.1| PREDICTED: DNA mismatch repair protein PMS1-like [Solanum tuberosum]
Length = 939
Score = 180 bits (456), Expect(2) = 1e-55
Identities = 89/112 (79%), Positives = 102/112 (91%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R + AA+LELS NEE KA+AL AT+ELE+LFKKEDF +MKVIGQFNLGFIIG+LDQD
Sbjct: 691 RDYAAATLELSGSENEEAKARALIDATNELEKLFKKEDFTRMKVIGQFNLGFIIGRLDQD 750
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMDTF 578
LFIVDQHAADEKYN+ERLSQ+TILNQQPLLRPLK+EL+PEEEI+IS+H DTF
Sbjct: 751 LFIVDQHAADEKYNFERLSQSTILNQQPLLRPLKLELSPEEEIIISIHNDTF 802
Score = 62.8 bits (151), Expect(2) = 1e-55
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +1
Query: 1 SISTNSQLVPQDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRL 180
S N V +++ DA Q + ++D P SS SK+ TLQFS K+L+SRR QRLSRL
Sbjct: 618 STCNNIHNVSENMVDASSSEQPASLTLDPPKASSNSKIASTLQFSVKELVSRRNQRLSRL 677
Query: 181 GYISHTSGRIKLK 219
++HTS R+K K
Sbjct: 678 QLLNHTSQRMKTK 690
>ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1-like [Solanum
lycopersicum]
Length = 940
Score = 181 bits (460), Expect(2) = 9e-54
Identities = 91/112 (81%), Positives = 102/112 (91%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R + AA+LELS NEE KA+AL AT+ELERLFKKEDF +MKVIGQFNLGFIIG+LDQD
Sbjct: 692 RDYAAATLELSGSENEEAKARALIDATNELERLFKKEDFTRMKVIGQFNLGFIIGRLDQD 751
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMDTF 578
LFIVDQHAADEKYN+ERLSQ+TILNQQPLLRPLK+EL+PEEEIVIS+H DTF
Sbjct: 752 LFIVDQHAADEKYNFERLSQSTILNQQPLLRPLKLELSPEEEIVISIHNDTF 803
Score = 55.1 bits (131), Expect(2) = 9e-54
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Frame = +1
Query: 34 DLSDAPVPLQSSGESI-----DSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHT 198
D+S+ V SS + D+P SS SK+ TLQFS K+L+SRR QRLSRL ++HT
Sbjct: 625 DVSENRVDASSSEQPASLTLDDAPKASSNSKIASTLQFSVKELVSRRNQRLSRLQLLNHT 684
Query: 199 SGRIKLK 219
S +K K
Sbjct: 685 SQTMKTK 691
>gb|EMJ00930.1| hypothetical protein PRUPE_ppa002523mg [Prunus persica]
Length = 662
Score = 178 bits (451), Expect(2) = 1e-48
Identities = 87/110 (79%), Positives = 103/110 (93%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R + AA+LELSQ NEE KA+ALAAAT+ELERLF+K+DF +MKVIGQFNLGFIIGKLDQD
Sbjct: 414 RCYAAATLELSQPENEERKARALAAATTELERLFRKQDFGRMKVIGQFNLGFIIGKLDQD 473
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
LFIVDQHAADEKYN+ERLSQ+TILNQQPLLRPL+++L+P+EE+V SMH+D
Sbjct: 474 LFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLDLSPQEEVVASMHID 523
Score = 41.6 bits (96), Expect(2) = 1e-48
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +1
Query: 46 APVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRL 180
AP P S P SSG + TLQFSF++L +RR+QRLSRL
Sbjct: 358 APSPSSSILSDTPKPKPSSGLMMHSTLQFSFQELKTRRQQRLSRL 402
>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 172 bits (437), Expect(2) = 3e-48
Identities = 82/110 (74%), Positives = 101/110 (91%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R ++AA+LE SQ NEE K +ALAAAT+ELE+LFKK+DF +MKVIGQFNLGFIIGKLDQD
Sbjct: 594 RCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQD 653
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
LFIVDQHAADEKYN+E L+Q+T+LNQQPLLRPL+++L+PEEE++ S+HMD
Sbjct: 654 LFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMD 703
Score = 45.4 bits (106), Expect(2) = 3e-48
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1
Query: 34 DLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHTSGR 207
DLS +Q + +D+P+ SS K+ TLQFSF++L +RR QRLSRL S+ GR
Sbjct: 533 DLSGVASAVQDT-PVLDTPMPSSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGR 589
>ref|NP_567236.1| DNA mismatch repair protein PMS1 [Arabidopsis thaliana]
gi|75249525|sp|Q941I6.1|PMS1_ARATH RecName: Full=DNA
mismatch repair protein PMS1; AltName: Full=Postmeiotic
segregation protein 1; AltName: Full=Protein POSTMEIOTIC
SEGREGATION 1 gi|15617225|gb|AAL01156.1| DNA mismatch
repair protein [Arabidopsis thaliana]
gi|332656775|gb|AEE82175.1| DNA mismatch repair protein
PMS1 [Arabidopsis thaliana]
Length = 923
Score = 165 bits (417), Expect(2) = 1e-46
Identities = 78/108 (72%), Positives = 99/108 (91%)
Frame = +3
Query: 249 FTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLF 428
F AA+LELSQ +EE KA+ALAAATSELERLF+KEDF++M+V+GQFNLGFII KL++DLF
Sbjct: 666 FAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLF 725
Query: 429 IVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
IVDQHAADEK+N+E L+++T+LNQQPLL+PL +EL+PEEE+ + MHMD
Sbjct: 726 IVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEEVTVLMHMD 773
Score = 47.8 bits (112), Expect(2) = 1e-46
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +1
Query: 25 VPQDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRL---GYIS 192
V +D PL+S +DSP S+G K+ TL+FSF++L +RR +RLSRL GY+S
Sbjct: 596 VSEDNPRCSQPLRSVATVLDSPAQSTGPKMFSTLEFSFQNLRTRRLERLSRLQSTGYVS 654
>ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp.
lyrata] gi|297318672|gb|EFH49094.1| hypothetical protein
ARALYDRAFT_490319 [Arabidopsis lyrata subsp. lyrata]
Length = 923
Score = 165 bits (417), Expect(2) = 2e-46
Identities = 78/108 (72%), Positives = 99/108 (91%)
Frame = +3
Query: 249 FTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLF 428
F AA+LELSQ +EE KA+ALAAATSELERLF+KEDF++M+V+GQFNLGFII KL++DLF
Sbjct: 670 FAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLF 729
Query: 429 IVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
IVDQHAADEK+N+E L+++T+LNQQPLL+PL +EL+PEEE+ + MHMD
Sbjct: 730 IVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEEVTVLMHMD 777
Score = 47.4 bits (111), Expect(2) = 2e-46
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Frame = +1
Query: 25 VPQDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRL---GYIS 192
+ +D PL+S +DSP S+G K+ TL+FSF++L RR +RLSRL GY+S
Sbjct: 600 ISEDNPGCSQPLRSVATVLDSPAQSTGPKMFSTLEFSFQNLRERRLERLSRLQSTGYVS 658
>ref|XP_003536886.1| PREDICTED: DNA mismatch repair protein PMS1-like isoform X1 [Glycine
max]
Length = 944
Score = 167 bits (422), Expect(2) = 3e-45
Identities = 84/108 (77%), Positives = 96/108 (88%)
Frame = +3
Query: 249 FTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLF 428
++ A+LELS+ E K +ALAAA +ELER FKKEDF +MKVIGQFNLGFII KLDQDLF
Sbjct: 697 YSDATLELSRSEIAEQKERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLF 756
Query: 429 IVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
IVDQHAADEKYN+ERLSQ+TILNQQPLLRP+K+EL+PEEEIV SMHMD
Sbjct: 757 IVDQHAADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMD 804
Score = 41.2 bits (95), Expect(2) = 3e-45
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 SISTNS-QLVPQDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSR 177
SI+ +S ++ D+ + PL SS +DS SS K+ +QFSF++L RR++RLS
Sbjct: 622 SINPSSIDMITADVFASDPPLHSSSVRLDSSK-SSRKKICSNMQFSFQELKKRREKRLSL 680
Query: 178 LGYISHTSGRIKLKS 222
L G+ K+KS
Sbjct: 681 LQSSKFGCGKAKVKS 695
>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
Length = 937
Score = 172 bits (437), Expect(2) = 3e-45
Identities = 82/110 (74%), Positives = 101/110 (91%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R ++AA+LE SQ NEE K +ALAAAT+ELE+LFKK+DF +MKVIGQFNLGFIIGKLDQD
Sbjct: 677 RCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQD 736
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
LFIVDQHAADEKYN+E L+Q+T+LNQQPLLRPL+++L+PEEE++ S+HMD
Sbjct: 737 LFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMD 786
Score = 35.4 bits (80), Expect(2) = 3e-45
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 34 DLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQR 168
DLS +Q + +D+P+ SS K+ TLQFSF++L +RR QR
Sbjct: 634 DLSGVASAVQDT-PVLDTPMPSSDLKICSTLQFSFEELRTRRHQR 677
>ref|XP_006396455.1| hypothetical protein EUTSA_v10028404mg [Eutrema salsugineum]
gi|557097472|gb|ESQ37908.1| hypothetical protein
EUTSA_v10028404mg [Eutrema salsugineum]
Length = 916
Score = 164 bits (415), Expect(2) = 3e-45
Identities = 80/110 (72%), Positives = 99/110 (90%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R F AA+LELSQ +EE KA+ALAAATSELERLF+KEDF++M+V+GQFNLGFII KLD+D
Sbjct: 661 RCFAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFIIAKLDRD 720
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
LFIVDQHAADEK+N+E L+++T+LNQQPLL+PL +EL+ EEE+ I MHMD
Sbjct: 721 LFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLTLELSAEEEVTILMHMD 770
Score = 43.9 bits (102), Expect(2) = 3e-45
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +1
Query: 55 PLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRL---GYIS 192
PL+ +DSP S+G K+ TL+FSF++L RR +RLSR+ GY+S
Sbjct: 603 PLRPVATVLDSPAQSTGPKMFSTLEFSFQNLRKRRLERLSRIQSTGYVS 651
>ref|XP_006575115.1| PREDICTED: DNA mismatch repair protein PMS1-like [Glycine max]
Length = 946
Score = 167 bits (423), Expect(2) = 5e-45
Identities = 84/108 (77%), Positives = 96/108 (88%)
Frame = +3
Query: 249 FTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLF 428
++AA+LE+ Q E K +ALAAA +ELER FKKEDF +MKVIGQFNLGFII KLDQDLF
Sbjct: 699 YSAATLEILQSEIGEQKERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLF 758
Query: 429 IVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
IVDQHAADEKYN+ERLSQ+TILNQQPLLRP+K+EL+PEEEIV SMHMD
Sbjct: 759 IVDQHAADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMD 806
Score = 40.0 bits (92), Expect(2) = 5e-45
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 SISTNS-QLVPQDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSR 177
SI+ +S ++ D+ + PL SS ++S SS +K+ +QFSF++L RR++RLS
Sbjct: 624 SITPSSIDMITTDVLASDPPLHSSPVWLNS-CKSSSNKICSNMQFSFQELKKRREKRLSL 682
Query: 178 LGYISHTSGRIKLKS*LFFSATEVL 252
L G+ K+KS + E+L
Sbjct: 683 LQSSKFGCGKAKVKSHYSAATLEIL 707
>ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
gi|355480599|gb|AES61802.1| DNA mismatch repair protein
[Medicago truncatula]
Length = 933
Score = 167 bits (423), Expect(2) = 6e-45
Identities = 84/108 (77%), Positives = 97/108 (89%)
Frame = +3
Query: 249 FTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLF 428
+TAA+LELSQ E+ K + LAAA +ELERLFKKE F +MKVIGQFNLGFIIGKLDQDLF
Sbjct: 686 YTAATLELSQPDIEQQKERVLAAAATELERLFKKEYFSRMKVIGQFNLGFIIGKLDQDLF 745
Query: 429 IVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
IVDQHAADEKYN+E LSQ+TILNQQPLLRP+++EL+PEEEIV S+HMD
Sbjct: 746 IVDQHAADEKYNFECLSQSTILNQQPLLRPIRLELSPEEEIVASIHMD 793
Score = 39.7 bits (91), Expect(2) = 6e-45
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 58 LQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHTSGRIKLKS 222
+ ++ + +DSP SSG K+ +QFSF+DL SRR++RLS + + G+ KS
Sbjct: 631 IDTTDDVLDSPK-SSGQKIFSNMQFSFQDLKSRREKRLSLVQSSKYRYGKANGKS 684
>gb|EPS64298.1| hypothetical protein M569_10482, partial [Genlisea aurea]
Length = 855
Score = 168 bits (425), Expect(2) = 6e-45
Identities = 85/112 (75%), Positives = 99/112 (88%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R + A+SL L V NE+ KA+ALAAA +ELERLF+KEDF MKVIGQFNLGFIIGKL+ D
Sbjct: 612 RDYNASSLGLQSV-NEDAKAEALAAAANELERLFRKEDFTHMKVIGQFNLGFIIGKLNSD 670
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMDTF 578
LFIVDQHAADEKYNYE L++TT+LNQQPLLRPLKME++PEEEIVISM+M+ F
Sbjct: 671 LFIVDQHAADEKYNYESLARTTVLNQQPLLRPLKMEMSPEEEIVISMNMNIF 722
Score = 38.9 bits (89), Expect(2) = 6e-45
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 76 SIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYIS-HTSGR-IKLK 219
S +S S FTL FS +DLM+RR+QRLSRL I H S R +K K
Sbjct: 562 SKESSTPSDSKGCCFTLHFSCRDLMTRRRQRLSRLHQIGPHASSRAVKFK 611
>ref|XP_006480112.1| PREDICTED: DNA mismatch repair protein PMS1-like [Citrus sinensis]
Length = 1058
Score = 183 bits (465), Expect = 2e-44
Identities = 91/110 (82%), Positives = 102/110 (92%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R F AA+LELSQ NEE KA+ALAAAT+ELERLF+KEDF +MKVIGQFNLGFIIGKLDQD
Sbjct: 810 RCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD 869
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
LFIVDQHAADEKYN+ERLSQ+T+LNQQPLLRPLK++L PEEE+V SMHMD
Sbjct: 870 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMD 919
Score = 62.0 bits (149), Expect = 1e-07
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMK 371
R F AA+LELSQ NEE KA+ALAAAT+ELERLF+KEDF +MK
Sbjct: 676 RCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 718
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/76 (47%), Positives = 47/76 (61%)
Frame = +1
Query: 31 QDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHTSGRI 210
+DLS A LQ SG +D+PV SS + TLQFS +DL RR+QRLS + HTSG +
Sbjct: 613 EDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSV 672
Query: 211 KLKS*LFFSATEVLLQ 258
K++ F +AT L Q
Sbjct: 673 KMRR-CFAAATLELSQ 687
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/76 (47%), Positives = 47/76 (61%)
Frame = +1
Query: 31 QDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHTSGRI 210
+DLS A LQ SG +D+PV SS + TLQFS +DL RR+QRLS + HTSG +
Sbjct: 747 EDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSV 806
Query: 211 KLKS*LFFSATEVLLQ 258
K++ F +AT L Q
Sbjct: 807 KMRR-CFAAATLELSQ 821
>ref|XP_006444299.1| hypothetical protein CICLE_v100188991mg, partial [Citrus
clementina] gi|557546561|gb|ESR57539.1| hypothetical
protein CICLE_v100188991mg, partial [Citrus clementina]
Length = 400
Score = 183 bits (465), Expect = 2e-44
Identities = 91/110 (82%), Positives = 102/110 (92%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R F AA+LELSQ NEE KA+ALAAAT+ELERLF+KEDF +MKVIGQFNLGFIIGKLDQD
Sbjct: 152 RCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD 211
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
LFIVDQHAADEKYN+ERLSQ+T+LNQQPLLRPLK++L PEEE+V SMHMD
Sbjct: 212 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMD 261
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/76 (47%), Positives = 47/76 (61%)
Frame = +1
Query: 31 QDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHTSGRI 210
+DLS A LQ SG +D+PV SS + TLQFS +DL RR+QRLS + HTSG +
Sbjct: 89 EDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSV 148
Query: 211 KLKS*LFFSATEVLLQ 258
K++ F +AT L Q
Sbjct: 149 KMRR-CFAAATLELSQ 163
>ref|XP_006287017.1| hypothetical protein CARUB_v10000165mg [Capsella rubella]
gi|482555723|gb|EOA19915.1| hypothetical protein
CARUB_v10000165mg [Capsella rubella]
Length = 923
Score = 161 bits (408), Expect(2) = 5e-44
Identities = 76/108 (70%), Positives = 99/108 (91%)
Frame = +3
Query: 249 FTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLF 428
F AA+LELSQ +EE KA+ALAAATSELERLF+KEDF++M+V+GQFNLGFII KL++DLF
Sbjct: 668 FAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLF 727
Query: 429 IVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
IVDQHAADEK+N+E L+++T+LNQQPLL+PL +EL+PEEE+ + MH++
Sbjct: 728 IVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEEVTVLMHIN 775
Score = 42.4 bits (98), Expect(2) = 5e-44
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +1
Query: 13 NSQLVPQDLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRL---G 183
N + + +D PL+S +DSP ++G K TLQFSF++L RR ++L RL G
Sbjct: 594 NMEKILEDNPCCSQPLRSVTTVLDSPAQTTGPKKFSTLQFSFQNLRKRRLEKLLRLQSTG 653
Query: 184 YIS 192
Y+S
Sbjct: 654 YVS 656
>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 157 bits (398), Expect(2) = 9e-44
Identities = 81/132 (61%), Positives = 100/132 (75%), Gaps = 22/132 (16%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R ++AA+LE SQ NEE K +ALAAAT+ELE+LFKK+DF +MKVIGQFNLGFIIGKLDQD
Sbjct: 3394 RCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQD 3453
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLR----------------------PLKMELA 536
LFIVDQHAADEKYN+E L+Q+T+LNQQPLLR PL+++L+
Sbjct: 3454 LFIVDQHAADEKYNFEHLAQSTVLNQQPLLRYGVQNIHEVTSIELLCVSYTIGPLRLDLS 3513
Query: 537 PEEEIVISMHMD 572
PEEE++ +HMD
Sbjct: 3514 PEEEVIAFIHMD 3525
Score = 45.4 bits (106), Expect(2) = 9e-44
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1
Query: 34 DLSDAPVPLQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHTSGR 207
DLS +Q + +D+P+ SS K+ TLQFSF++L +RR QRLSRL S+ GR
Sbjct: 3333 DLSXVASAVQDT-PVLDTPMPSSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGR 3389
>ref|XP_004292655.1| PREDICTED: mismatch repair endonuclease PMS2-like [Fragaria vesca
subsp. vesca]
Length = 913
Score = 181 bits (459), Expect = 1e-43
Identities = 90/110 (81%), Positives = 102/110 (92%)
Frame = +3
Query: 243 RGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQD 422
R + AA+LELSQ NEE KA+ALAAAT ELERLF+KEDF +MKVIGQFNLGFIIGKLDQD
Sbjct: 665 RCYAAATLELSQPENEERKARALAAATKELERLFRKEDFGKMKVIGQFNLGFIIGKLDQD 724
Query: 423 LFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
LFIVDQHAADEKYN+ERLSQ+TILNQQPLLRPL++EL+PEEE+V SMH+D
Sbjct: 725 LFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLELSPEEEVVASMHID 774
>gb|EXB36415.1| Mismatch repair endonuclease PMS2 [Morus notabilis]
Length = 938
Score = 177 bits (450), Expect = 1e-42
Identities = 95/148 (64%), Positives = 118/148 (79%)
Frame = +3
Query: 129 VQF*RFDVKKEAEAVKTRIHQSYIWKNKVKKLTFFFRYRGFTAASLELSQVANEEGKAKA 308
+QF D+KK + ++H +N + + T R+ + A +LELSQ NE+ KA+A
Sbjct: 658 LQFSFPDLKKRRQQRLAQLHS----RNGICQRTNAKRF--YAATTLELSQPENEDRKARA 711
Query: 309 LAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNYERLSQTT 488
LAAAT+ELERLF+KEDF +MKVIGQFNLGFIIGKLDQDLFIVDQHAADEK+N+ERLSQ+T
Sbjct: 712 LAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKFNFERLSQST 771
Query: 489 ILNQQPLLRPLKMELAPEEEIVISMHMD 572
ILN QPLLRPL++EL+PEEE+V SMHMD
Sbjct: 772 ILNLQPLLRPLRLELSPEEEVVASMHMD 799
>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
repair endonuclease PMS2-like [Cucumis sativus]
Length = 921
Score = 171 bits (433), Expect(2) = 2e-42
Identities = 83/110 (75%), Positives = 99/110 (90%)
Frame = +3
Query: 249 FTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQDLF 428
+ AA+L+LSQ NE+ KA+AL AA EL+RLF+K+DF +MKVIGQFNLGFIIGKLDQDLF
Sbjct: 676 YAAATLKLSQTDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLF 735
Query: 429 IVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMDTF 578
IVDQHAADEKYN+ERLSQ+TILNQQPLLRPL +EL+ EEE+V+S+HMD F
Sbjct: 736 IVDQHAADEKYNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVF 785
Score = 27.3 bits (59), Expect(2) = 2e-42
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 43 DAPVP---LQSSGESIDSPVVSSGSKVGFTLQFSFKDLMSRRKQRLSRLGYISHTSGRIK 213
D P+P +Q SG +S S K+ T F F +L RR QR R +T R K
Sbjct: 614 DLPLPGCSIQPSGFLKESS--SPQLKLCSTFHFDFHELKKRRFQRQLRFKLNGYTCERKK 671
Query: 214 LK 219
LK
Sbjct: 672 LK 673
>ref|XP_002321013.1| DNA mismatch repair family protein [Populus trichocarpa]
gi|222861786|gb|EEE99328.1| DNA mismatch repair family
protein [Populus trichocarpa]
Length = 915
Score = 177 bits (448), Expect = 2e-42
Identities = 87/111 (78%), Positives = 102/111 (91%)
Frame = +3
Query: 240 YRGFTAASLELSQVANEEGKAKALAAATSELERLFKKEDFKQMKVIGQFNLGFIIGKLDQ 419
+R + AA+LELSQ NEE K +ALAAAT+ELERLF+KEDF +MKVIGQFNLGFIIGKLDQ
Sbjct: 666 HRSYAAATLELSQPDNEERKLRALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ 725
Query: 420 DLFIVDQHAADEKYNYERLSQTTILNQQPLLRPLKMELAPEEEIVISMHMD 572
DLFIVDQHAADEKYN+ERL Q+TILNQQPLLRPL++EL+PEEE+V SM++D
Sbjct: 726 DLFIVDQHAADEKYNFERLCQSTILNQQPLLRPLRLELSPEEEVVASMNLD 776