BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027199
         (653 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu...   362   4e-98
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   355   5e-96
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   354   1e-95
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              353   2e-95
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]      353   3e-95
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]   352   4e-95
gb|ACJ63306.1| RNA polymerase III large subunit [Acorus calamus]      351   9e-95
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]          351   1e-94
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]      351   1e-94
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...   350   3e-94
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]      349   4e-94
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   347   1e-93
gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mir...   347   1e-93
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   347   2e-93
gb|AAS79699.1| RNA polymerase III large subunit [Nymphaea lotus]      346   4e-93
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   345   5e-93
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   345   5e-93
gb|AAS79692.1| RNA polymerase III large subunit [Taxus canadensis]    345   5e-93
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   345   9e-93
ref|XP_003606553.1| DNA-directed RNA polymerase [Medicago trunca...   345   9e-93

>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
          Length = 546

 Score =  362 bits (930), Expect = 4e-98
 Identities = 176/219 (80%), Positives = 194/219 (88%), Gaps = 2/219 (0%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 8   EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 67

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKE--TMCPK 299
             DPIDLPTPAL+KP ELWTGKQLFSVL+RPHA+MRVYLNLTL E+ Y KSK+  TMCP 
Sbjct: 68  GMDPIDLPTPALLKPIELWTGKQLFSVLIRPHARMRVYLNLTLTERIYDKSKDKKTMCPN 127

Query: 298 DGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNH 119
           DG+VY RNSEL+ GQLGKATLGNGNKDGL+SVLLRDY  HAAA+CMNRLAKLSARWIGNH
Sbjct: 128 DGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNH 187

Query: 118 GFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESYKS 2
           GFSIGI+DVQPG  LN+ KK+ I+K Y +C D I  Y +
Sbjct: 188 GFSIGIDDVQPGEHLNRNKKLEIEKGYKECDDLINRYNT 226


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  355 bits (912), Expect = 5e-96
 Identities = 174/217 (80%), Positives = 190/217 (87%), Gaps = 2/217 (0%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 512  EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 571

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGK--SKETMCPK 299
              D +DLPTPA++KP ELWTGKQLF+VLLRPHA +RVYLNLT+ EK Y K   KETMCP 
Sbjct: 572  GMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPS 631

Query: 298  DGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNH 119
            DGFVY RNSELISGQLGKATLGNGNKDGL+SVLLRDYN HAAAACMNRLAKLSARWIGNH
Sbjct: 632  DGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNH 691

Query: 118  GFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
            GFSIGI+DVQPG  LN +K   I++ Y  C + I+ Y
Sbjct: 692  GFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQY 728


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  354 bits (908), Expect = 1e-95
 Identities = 172/215 (80%), Positives = 190/215 (88%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEALMLMGVQ+NLCTPKNGEILVASTQDFLTSSYLITRKDTFYDR++FSLMCSYMGD
Sbjct: 508  EARTEALMLMGVQHNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGD 567

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
              + IDLPTPAL+KP ELWTGKQLFSVL+RPHA M+VY+NL+L EKNY K  ETMC  DG
Sbjct: 568  GMENIDLPTPALLKPVELWTGKQLFSVLIRPHAHMKVYVNLSLMEKNYSKGGETMCANDG 627

Query: 292  FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
            FVYIRNSELISGQLGKATLGNGNKDGL+SVLLRDYN+HAAA+CMNRLAKLSARWIGNHGF
Sbjct: 628  FVYIRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGF 687

Query: 112  SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
            SIGI+DV PG  L K+K+  I   Y  C  +I++Y
Sbjct: 688  SIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFIDAY 722


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  353 bits (906), Expect = 2e-95
 Identities = 173/217 (79%), Positives = 189/217 (87%), Gaps = 2/217 (0%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 512  EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 571

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGK--SKETMCPK 299
              D +DLPTPA++K  ELWTGKQLF+VLLRPHA +RVYLNLT+ EK Y K   KETMCP 
Sbjct: 572  GMDLVDLPTPAIIKAMELWTGKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPS 631

Query: 298  DGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNH 119
            DGFVY RNSELISGQLGKATLGNGNKDGL+SVLLRDYN HAAAACMNRLAKLSARWIGNH
Sbjct: 632  DGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNH 691

Query: 118  GFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
            GFSIGI+DVQPG  LN +K   I++ Y  C + I+ Y
Sbjct: 692  GFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQY 728


>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
          Length = 548

 Score =  353 bits (905), Expect = 3e-95
 Identities = 168/215 (78%), Positives = 193/215 (89%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEALMLMGVQNNLCTPKNGEIL+ASTQDFLTSS+LITRKDTFYDR++F LMCSYMGD
Sbjct: 10  EARTEALMLMGVQNNLCTPKNGEILIASTQDFLTSSFLITRKDTFYDRATFCLMCSYMGD 69

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
           A +PIDLPTP ++KP ELWTGKQLFSVL+RP+A +RV++NL LAEKNY KS+ETMCP DG
Sbjct: 70  AVEPIDLPTPTILKPIELWTGKQLFSVLVRPNANVRVFVNLMLAEKNYSKSRETMCPNDG 129

Query: 292 FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
           FVY RNSELISGQ+GKATLGNGNKDGL++VLLRDYNTHAAA+ MNRLAKLSARWIGNHGF
Sbjct: 130 FVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLSARWIGNHGF 189

Query: 112 SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
           SIGI+DVQPG  L+ +K+  I + Y +C  +I+ Y
Sbjct: 190 SIGIDDVQPGTRLSAQKEERIKEGYSKCDMHIDLY 224


>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
          Length = 554

 Score =  352 bits (904), Expect = 4e-95
 Identities = 171/217 (78%), Positives = 193/217 (88%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITR+DTFYDR+SFSLMCSYMGD
Sbjct: 8   EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGD 67

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
           A D IDLPTPAL+KP ELWTGKQLF+VL+RPHA+MRV++NLT+ EK+Y K +ET+CP DG
Sbjct: 68  AMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYIKGRETLCPNDG 127

Query: 292 FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
           FVY RNSELI GQLGKATLGNGNKDGL+SVLLRDY+ HAAA+CMNRLAKLSARWIGN GF
Sbjct: 128 FVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNQGF 187

Query: 112 SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESYKS 2
           SIGI+DVQPG  L+ +K+  IDK   +C   IE YK+
Sbjct: 188 SIGISDVQPGKSLSDKKQKKIDKGKEKCDKLIEHYKT 224


>gb|ACJ63306.1| RNA polymerase III large subunit [Acorus calamus]
          Length = 544

 Score =  351 bits (901), Expect = 9e-95
 Identities = 170/217 (78%), Positives = 193/217 (88%), Gaps = 2/217 (0%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA T+A++LMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRS+F LMCS+MGD
Sbjct: 8   EARTDAMILMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAFCLMCSFMGD 67

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGK--SKETMCPK 299
             DPIDLPTPAL+KP ELWTGKQLFSVLLRP+A+MRV++NLTL EK+Y K   +ETMCP 
Sbjct: 68  GMDPIDLPTPALIKPMELWTGKQLFSVLLRPYAQMRVFVNLTLMEKSYDKRQGRETMCPN 127

Query: 298 DGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNH 119
           D FVY RNS+L+ GQLGKATLGNGNKDGL+SVLLRDYN+HAAA+CMNRLAKLSARWIGNH
Sbjct: 128 DAFVYFRNSDLLCGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 187

Query: 118 GFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
           GFSIGI+DVQPG  LN  KK TI+K Y +C + I S+
Sbjct: 188 GFSIGIDDVQPGHHLNLRKKETIEKSYEKCDNLICSF 224


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score =  351 bits (900), Expect = 1e-94
 Identities = 175/226 (77%), Positives = 191/226 (84%), Gaps = 11/226 (4%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKD FYDR++FSL+CSYMGD
Sbjct: 509  EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGD 568

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGK---------- 323
              D IDLPTPAL+KP ELWTGKQLFSVLLRPHA +RVYLNL + E+NY K          
Sbjct: 569  GMDLIDLPTPALLKPIELWTGKQLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKE 628

Query: 322  -SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAK 146
               ETMCP DGFVYIRNSELI GQLGKATLGNGNKDGLYSVLLRDYN HAAAACMNRLAK
Sbjct: 629  IEVETMCPDDGFVYIRNSELICGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAK 688

Query: 145  LSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
            LSARWIGNHGFSIGI+DVQPG  LN EK +TI  +Y +C + I+++
Sbjct: 689  LSARWIGNHGFSIGIDDVQPGKRLNDEKALTISGDYKKCDEEIQTF 734


>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
          Length = 547

 Score =  351 bits (900), Expect = 1e-94
 Identities = 169/215 (78%), Positives = 188/215 (87%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDR +F LMCS+MGD
Sbjct: 8   EARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRDTFCLMCSFMGD 67

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
             + IDLPTPAL+KP ELWTGKQ+FSVL+RP A MRVY+NLT+ EKNY KS ET CPKDG
Sbjct: 68  VMEHIDLPTPALIKPMELWTGKQIFSVLIRPQAHMRVYVNLTVVEKNYSKSGETRCPKDG 127

Query: 292 FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
           +VY RNSELI GQLGKATLGNGNKDGL+SVLLRDY+ HAAA+CMNRLA+LSARWIG+HGF
Sbjct: 128 YVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAELSARWIGDHGF 187

Query: 112 SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
           SIGI DVQP   LN +KK TI+K Y +C + I SY
Sbjct: 188 SIGIEDVQPDEHLNHQKKTTIEKGYEECDNLILSY 222


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score =  350 bits (897), Expect = 3e-94
 Identities = 170/217 (78%), Positives = 189/217 (87%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            E+  EA+MLMGVQNNLCTPKNGE+LVASTQDFLTSS+LITRKDTFYDRS+FSL+C+++ D
Sbjct: 505  ESRAEAIMLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRKDTFYDRSAFSLICAFVSD 564

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
                +DLP PA+VKP ELWTGKQ+FSVLLRP    +V++NLT+AEK Y KS ETMCP+DG
Sbjct: 565  GLGTVDLPMPAVVKPVELWTGKQIFSVLLRPDKDRKVFVNLTVAEKIYVKSGETMCPRDG 624

Query: 292  FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
            FV IRNSELISGQLGKATLGNG+KDGLYS+LLRDY  HAAA CMNRLAKLSARWIGNHGF
Sbjct: 625  FVCIRNSELISGQLGKATLGNGSKDGLYSILLRDYGAHAAADCMNRLAKLSARWIGNHGF 684

Query: 112  SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESYKS 2
            SIGINDVQPG  LN EKK  ID EYGQC  YIESYKS
Sbjct: 685  SIGINDVQPGDILNTEKKTVIDDEYGQCIRYIESYKS 721


>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
          Length = 548

 Score =  349 bits (896), Expect = 4e-94
 Identities = 167/215 (77%), Positives = 190/215 (88%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEAL LMGVQNNLCTPKNGEIL+ASTQDFLTSS+LITRKDTFYDR+SF LMCSYMGD
Sbjct: 10  EARTEALTLMGVQNNLCTPKNGEILIASTQDFLTSSFLITRKDTFYDRASFCLMCSYMGD 69

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
           A +PIDLPTP ++KP ELWTGKQLFSVL+RP+A +RV++NL L EKNY KS ETMCP DG
Sbjct: 70  AAEPIDLPTPTILKPMELWTGKQLFSVLVRPNANVRVFVNLMLTEKNYSKSGETMCPNDG 129

Query: 292 FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
           FVY RNSELISGQ+GKATLGNGNKDGL++VLLRDYNTHAAA+ MNRLAKLSARWIGNHGF
Sbjct: 130 FVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLSARWIGNHGF 189

Query: 112 SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
           SIGI+DVQPG  L+ +K+  I + Y +C  +I+ Y
Sbjct: 190 SIGIDDVQPGTRLSAKKEERIKEGYSKCDMHIDLY 224


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  347 bits (891), Expect = 1e-93
 Identities = 172/223 (77%), Positives = 190/223 (85%), Gaps = 6/223 (2%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEA++LMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 508  EARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 567

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSK------ET 311
              D +DLPTPALVKP ELWTGKQLFSVL+RPHA M+VYLNLT+ EK+Y K K      ET
Sbjct: 568  GMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERET 627

Query: 310  MCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARW 131
            MCP DGFVY RNSELISGQ+GKATLGNGNKDGLYSVLLRDY  HAAA CMNRLAKLSARW
Sbjct: 628  MCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARW 687

Query: 130  IGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESYKS 2
            IGNHGFSIGI+DVQPG +L K+K+ TI + Y  C   I  + +
Sbjct: 688  IGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDKQINLFNT 730


>gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mirabilis]
          Length = 548

 Score =  347 bits (891), Expect = 1e-93
 Identities = 167/215 (77%), Positives = 193/215 (89%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEALMLMGVQNNLCTPKNG+ILVA+TQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 10  EARTEALMLMGVQNNLCTPKNGDILVAATQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 69

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
           AT+ IDLPTPA++KP ELWTGKQLFSVL+RP+AKMRV++NL + EKNY KS ETMCP DG
Sbjct: 70  ATESIDLPTPAILKPIELWTGKQLFSVLVRPNAKMRVFVNLMVMEKNYSKSGETMCPNDG 129

Query: 292 FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
            VY RNSELISGQLGKATLGNGNK+GL++VLLRDYN +AAA+CMNRLAKLSARWIGNHGF
Sbjct: 130 CVYFRNSELISGQLGKATLGNGNKNGLFTVLLRDYNAYAAASCMNRLAKLSARWIGNHGF 189

Query: 112 SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
           SIGI+DVQPG  L+ +K+  I + Y +C  +I+ Y
Sbjct: 190 SIGIDDVQPGARLSSQKEERIKEGYSKCGMHIDLY 224


>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc1-like, partial [Cucumis sativus]
          Length = 693

 Score =  347 bits (889), Expect = 2e-93
 Identities = 172/223 (77%), Positives = 189/223 (84%), Gaps = 6/223 (2%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEA++LMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 206 EARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 265

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSK------ET 311
             D +DLPTPALVKP ELWTGKQLFSVL+RPHA M+VYLNLT+ EK+Y K K      ET
Sbjct: 266 GMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERET 325

Query: 310 MCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARW 131
           MCP DGFVY RNSELISGQ+GKATLGNGNKDGLYSVLLRDY  HAAA CMNRLAKLSARW
Sbjct: 326 MCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARW 385

Query: 130 IGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESYKS 2
           IGNHGFSIGI+DVQPG +L K+ K TI + Y  C   I  + +
Sbjct: 386 IGNHGFSIGIDDVQPGDQLVKKNKXTILEGYRDCDKQINLFNT 428


>gb|AAS79699.1| RNA polymerase III large subunit [Nymphaea lotus]
          Length = 545

 Score =  346 bits (887), Expect = 4e-93
 Identities = 166/215 (77%), Positives = 185/215 (86%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA  EALMLMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 10  EARAEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 69

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
             DPIDLPTPAL+KP ELWTGKQLFSVL+RPHA MR+Y+NL L EK   K++ TMCP DG
Sbjct: 70  GMDPIDLPTPALLKPIELWTGKQLFSVLIRPHASMRIYVNLFLKEKKCVKNRGTMCPNDG 129

Query: 292 FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
           FVYIRNSEL+ GQ+GKATLGNGNK GL+SVL+RDYN HAAA+CMNRLAKLSARWIGNHGF
Sbjct: 130 FVYIRNSELLCGQVGKATLGNGNKSGLFSVLIRDYNAHAAASCMNRLAKLSARWIGNHGF 189

Query: 112 SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
           +IGI+DVQP   L K+    I +   QC  YI+SY
Sbjct: 190 TIGIDDVQPEARLAKKNSRVIQRAQNQCNSYIDSY 224


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  345 bits (886), Expect = 5e-93
 Identities = 167/215 (77%), Positives = 187/215 (86%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEALMLMGVQNNLCTPK+GEILVASTQDFLTSS+LITRKDTFY+R+SFSL+CSYMGD
Sbjct: 509  EARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGD 568

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
            A DP DLP+PA +KP ELWTGKQLF +LLRP++KMRVY+NLT+ EK+Y    ETMCP DG
Sbjct: 569  AMDPTDLPSPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDG 628

Query: 292  FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
            FVY RNSELISGQLGKATLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGF
Sbjct: 629  FVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGF 688

Query: 112  SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
            SIGI+DV PG  L K+K+  I + Y +C D I  +
Sbjct: 689  SIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQF 723


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  345 bits (886), Expect = 5e-93
 Identities = 167/215 (77%), Positives = 187/215 (86%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEALMLMGVQNNLCTPK+GEILVASTQDFLTSS+LITRKDTFY+R+SFSL+CSYMGD
Sbjct: 509  EARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGD 568

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
            A DP DLP+PA +KP ELWTGKQLF +LLRP++KMRVY+NLT+ EK+Y    ETMCP DG
Sbjct: 569  AMDPTDLPSPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDG 628

Query: 292  FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
            FVY RNSELISGQLGKATLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGF
Sbjct: 629  FVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGF 688

Query: 112  SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
            SIGI+DV PG  L K+K+  I + Y +C D I  +
Sbjct: 689  SIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQF 723


>gb|AAS79692.1| RNA polymerase III large subunit [Taxus canadensis]
          Length = 546

 Score =  345 bits (886), Expect = 5e-93
 Identities = 165/215 (76%), Positives = 193/215 (89%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEALMLMGVQNNLCTPKNGEIL+ASTQDFLTSS+LITRKDTFYDR++FSLMCSYMGD
Sbjct: 10  EARTEALMLMGVQNNLCTPKNGEILIASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGD 69

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
           A++ IDLPTPA++KP ELWTGKQLF+VL+RP+AKMRV++NL + EKNY KS ETMCP DG
Sbjct: 70  ASEHIDLPTPAILKPIELWTGKQLFTVLVRPNAKMRVFVNLIVMEKNYSKSGETMCPNDG 129

Query: 292 FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
            V+ RNSEL+SGQLGKATLGNGNK+GL++VLLRDYN+HAAA CMNRLAKLSARWIGNHGF
Sbjct: 130 RVFFRNSELLSGQLGKATLGNGNKNGLFTVLLRDYNSHAAACCMNRLAKLSARWIGNHGF 189

Query: 112 SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
           SIGI+DVQPG  L+ +K+  I + Y +C  +I+ Y
Sbjct: 190 SIGIDDVQPGTRLSAKKEEQIREGYSKCNMHIDLY 224


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  345 bits (884), Expect = 9e-93
 Identities = 168/215 (78%), Positives = 186/215 (86%)
 Frame = -2

Query: 652  EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
            EA TEALMLMGVQNNLCTPK+GEILVASTQDFLTSS+LITRKDTFY+R+SFSL+CSYMGD
Sbjct: 509  EARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGD 568

Query: 472  ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYGKSKETMCPKDG 293
            A DP DLP+PA +KP ELWTGKQLF VLLRP++KMRVY+NLTL EK+Y    ETMC  DG
Sbjct: 569  AMDPTDLPSPAFIKPVELWTGKQLFHVLLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDG 628

Query: 292  FVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGF 113
            FVY RNSELISGQLGKATLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGF
Sbjct: 629  FVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGF 688

Query: 112  SIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESY 8
            SIGI+DV PG  L K+K+  I + Y +C D I  +
Sbjct: 689  SIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQF 723


>ref|XP_003606553.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355507608|gb|AES88750.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 807

 Score =  345 bits (884), Expect = 9e-93
 Identities = 170/224 (75%), Positives = 192/224 (85%), Gaps = 7/224 (3%)
 Frame = -2

Query: 652 EALTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGD 473
           EA TEAL+LM VQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRSSFSL+CSYMGD
Sbjct: 271 EARTEALLLMTVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSSFSLICSYMGD 330

Query: 472 ATDPIDLPTPALVKPQELWTGKQLFSVLLRPHAKMRVYLNLTLAEKNYG-------KSKE 314
             DPIDLPTPA++KP ELW+GKQLFS+LLRPHA +RVY+NLT+ EKNYG       +  +
Sbjct: 331 GMDPIDLPTPAIIKPVELWSGKQLFSILLRPHANVRVYVNLTVKEKNYGSKLDDREREFK 390

Query: 313 TMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSAR 134
           TMCP DGFVY RNSELISGQLGK TLGNGNKDGL+SVLLRDY + AAA+CMNRLAKLSAR
Sbjct: 391 TMCPDDGFVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYKSDAAASCMNRLAKLSAR 450

Query: 133 WIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYIESYKS 2
           WIGNHGFSIGI+DVQP  +L K K+ TID  Y +C  +IE++ S
Sbjct: 451 WIGNHGFSIGIDDVQPKDKLIKGKEETIDDGYKKCDGFIEAFNS 494