BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027054
         (552 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]     101   1e-19
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
emb|CBI21003.3| unnamed protein product [Vitis vinifera]              100   3e-19
ref|XP_002309609.2| pentatricopeptide repeat-containing family p...    91   1e-16
ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citr...    88   1e-15
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containi...    86   6e-15
gb|EOY31434.1| Pentatricopeptide repeat superfamily protein, put...    85   1e-14
ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
gb|EMJ08063.1| hypothetical protein PRUPE_ppa1027201mg, partial ...    84   3e-14
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,...    76   6e-12
gb|ESW08977.1| hypothetical protein PHAVU_009G090400g [Phaseolus...    75   1e-11
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ...    71   2e-10
ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [A...    64   3e-08
ref|NP_191058.1| pentatricopeptide repeat-containing protein [Ar...    64   3e-08
ref|XP_002876279.1| pentatricopeptide repeat-containing protein ...    63   5e-08
ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Caps...    62   7e-08
ref|XP_002879788.1| pentatricopeptide repeat-containing protein ...    62   1e-07
ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Caps...    60   3e-07
ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidops...    60   3e-07

>gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]
          Length = 907

 Score =  101 bits (251), Expect = 1e-19
 Identities = 52/120 (43%), Positives = 76/120 (63%)
 Frame = -2

Query: 362 SIPLPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYF 183
           S+   + D   +   S  + + ++   +   S +T L+QA V++TLLSH NDP SAL+YF
Sbjct: 48  SLATKSLDEFTSESNSAEKPTSEVDPNRNLCSLSTDLTQAHVINTLLSHKNDPYSALKYF 107

Query: 182 NWVEKQRGFVREIGDSFFVLIHILVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLINC 3
            W E+ RGF+R + DSF VL+HIL+ S+  HG  ++LL+ Y+SGD  PS  V VD L +C
Sbjct: 108 KWAERMRGFIRGV-DSFSVLLHILMGSQETHGSAQSLLSLYVSGDSGPSANVFVDHLFDC 166


>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  100 bits (248), Expect = 3e-19
 Identities = 53/97 (54%), Positives = 63/97 (64%)
 Frame = -2

Query: 293 IPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHI 114
           +PT Q    E T LSQ  V+D LL H+NDP SAL YF   E QRGF+R + D++ VL+HI
Sbjct: 86  VPTSQIH-QETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGV-DAYCVLLHI 143

Query: 113 LVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLINC 3
           L+ S   HG  R LLN Y+SGD  PS  V VD LINC
Sbjct: 144 LMRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINC 180


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  100 bits (248), Expect = 3e-19
 Identities = 53/97 (54%), Positives = 63/97 (64%)
 Frame = -2

Query: 293 IPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHI 114
           +PT Q    E T LSQ  V+D LL H+NDP SAL YF   E QRGF+R + D++ VL+HI
Sbjct: 46  VPTSQIH-QETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGV-DAYCVLLHI 103

Query: 113 LVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLINC 3
           L+ S   HG  R LLN Y+SGD  PS  V VD LINC
Sbjct: 104 LMRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINC 140


>ref|XP_002309609.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550337148|gb|EEE93132.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 841

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 47/115 (40%), Positives = 66/115 (57%)
 Frame = -2

Query: 353 LPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWV 174
           LPN    E   +  P  +   P    P S+++ L+Q   +DTLL+H NDP SAL YF W 
Sbjct: 29  LPNIPISETPLSQNPHPNTNFPGKSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWA 88

Query: 173 EKQRGFVREIGDSFFVLIHILVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLI 9
            ++RG ++ + D+  VL+HIL  S    G  RNLLN + S D+ P  +V+V RLI
Sbjct: 89  SQKRGLIKSV-DALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVSRLI 142


>ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citrus clementina]
           gi|568859583|ref|XP_006483317.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Citrus sinensis]
           gi|557553718|gb|ESR63732.1| hypothetical protein
           CICLE_v10010816mg [Citrus clementina]
          Length = 850

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 25/141 (17%)
 Frame = -2

Query: 356 PLPNSDSIEANPTSEPQTSIKIPTCQTPISEN-------------------------TRL 252
           P  N+ SI     S+PQ+S K  + ++P+SEN                         T L
Sbjct: 17  PFKNTKSI----CSQPQSSEKPISSESPVSENFPEKITKGSHFSGNPIFPESNTFQPTDL 72

Query: 251 SQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGPVRNL 72
           SQ  V+ +LLS  N+P SA EYF  VE++RGF++ + D+F VL+HIL+  R  H   RNL
Sbjct: 73  SQTSVISSLLSCRNEPVSAFEYFKRVERRRGFLKSL-DTFCVLLHILMKDRESHRYARNL 131

Query: 71  LNNYLSGDFAPSGAVLVDRLI 9
           LN+Y+SG   P+ A ++D LI
Sbjct: 132 LNHYVSGGSEPTSAAIIDHLI 152


>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cicer arietinum]
          Length = 850

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 51/121 (42%), Positives = 73/121 (60%)
 Frame = -2

Query: 365 TSIPLPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEY 186
           +SIP  N        T+ P   I  P     I  +T  SQ  ++DTLL+H ++P SAL++
Sbjct: 38  SSIPPNNLRPFSQLSTNFPDKIISTPNFPEKII-STSNSQNQILDTLLTHKSNPKSALKF 96

Query: 185 FNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLIN 6
           F  VE++RGFV+ + D F +L+ IL S+   H  +RNLLNNY+ GD +PS  VLV+ L+ 
Sbjct: 97  FKGVERKRGFVKTV-DVFSLLLQILSSTPQTHSSLRNLLNNYVFGDSSPSPKVLVEHLLE 155

Query: 5   C 3
           C
Sbjct: 156 C 156


>ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Solanum lycopersicum]
          Length = 850

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 43/95 (45%), Positives = 56/95 (58%)
 Frame = -2

Query: 287 TCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHILV 108
           +C  P SE+ + ++  VVD LLSH +DP SA  YF     QRGF+    D FFVL+HILV
Sbjct: 57  SCGRPNSEDVKFTKNHVVDVLLSHRDDPDSAYRYFQTARLQRGFLHSKSDPFFVLLHILV 116

Query: 107 SSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLINC 3
           +S  H    R LL+ Y S D  PS  V+ + L+ C
Sbjct: 117 NSAMHQHKSRRLLDYYASSDSGPSATVVFNGLVKC 151


>gb|EOY31434.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 1159

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 44/97 (45%), Positives = 66/97 (68%)
 Frame = -2

Query: 296 KIPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIH 117
           K P     ++++T L++  V++TLL H N+P SAL+YF +VE +RGFVR I D F VL+H
Sbjct: 367 KDPRLTPSLTQDTSLTRTHVINTLLIHRNNPESALKYFRFVENKRGFVRSI-DVFCVLLH 425

Query: 116 ILVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLIN 6
           ILV S+  +  V+ LLN +++GD  P+  V +D LI+
Sbjct: 426 ILVGSQQTNKQVKYLLNRFVAGDSGPTPIVFLDHLID 462


>ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565397380|ref|XP_006364274.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 854

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 41/95 (43%), Positives = 56/95 (58%)
 Frame = -2

Query: 287 TCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHILV 108
           +C  P SE+ + ++  VVD LLSH +DP SA  +F     QRGF+    D FFVL+HILV
Sbjct: 61  SCGGPNSEDGKFTKTHVVDVLLSHRDDPDSAYRHFQTARLQRGFLHSKSDPFFVLLHILV 120

Query: 107 SSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLINC 3
           +S  H    R LL+ Y S D  PS  ++ + L+ C
Sbjct: 121 NSAMHQHKARRLLDYYASSDSGPSATIIFNGLVKC 155


>gb|EMJ08063.1| hypothetical protein PRUPE_ppa1027201mg, partial [Prunus persica]
          Length = 782

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/86 (47%), Positives = 58/86 (67%)
 Frame = -2

Query: 260 TRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGPV 81
           + L+Q  V+ TLLSH ++P+SAL++F W EK+RGF++ + D+F VL+HIL      H   
Sbjct: 1   SELTQTKVISTLLSHRSEPNSALKHFIWAEKERGFLKGV-DAFCVLLHILTGFEETHVRA 59

Query: 80  RNLLNNYLSGDFAPSGAVLVDRLINC 3
           + LLN Y SGD  PS  V  DRL++C
Sbjct: 60  QILLNQYASGDSGPSQQVFFDRLVDC 85


>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 927

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 42/89 (47%), Positives = 56/89 (62%)
 Frame = -2

Query: 275 PISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRN 96
           P S+++ L++  V+DTLLS+  DP SAL YF  +E  RGFVR + DS  VL+HIL  S  
Sbjct: 75  PASQDSVLARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSL-DSLCVLLHILTRSSE 133

Query: 95  HHGPVRNLLNNYLSGDFAPSGAVLVDRLI 9
                +NLLN ++SGD  P   +LVD  I
Sbjct: 134 TLKQAQNLLNRFISGDSGPMPNILVDHFI 162


>gb|ESW08977.1| hypothetical protein PHAVU_009G090400g [Phaseolus vulgaris]
          Length = 741

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 45/96 (46%), Positives = 59/96 (61%)
 Frame = -2

Query: 290 PTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHIL 111
           P  Q+P S     SQ  V+DTLL    DP SAL +F  VE++RGFV+ + D   +L+ IL
Sbjct: 49  PEAQSPESPLIP-SQNEVLDTLLLRKADPISALMFFKQVERKRGFVKTV-DILCLLLQIL 106

Query: 110 VSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLINC 3
            SS + HG  + LLNNY+ GD AP   VLV+ L+ C
Sbjct: 107 ASSPDTHGDAKYLLNNYVFGDSAPCAKVLVELLVEC 142


>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508380|gb|AES89522.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 40/92 (43%), Positives = 60/92 (65%)
 Frame = -2

Query: 278 TPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSR 99
           +P S+ +     F+V TLLSH ++P SAL++F+ VE++RGFV+ + D   +LIHIL S+ 
Sbjct: 51  SPESQPSEKKNRFLV-TLLSHKSNPKSALKFFHQVERKRGFVKTV-DFISLLIHILSSNS 108

Query: 98  NHHGPVRNLLNNYLSGDFAPSGAVLVDRLINC 3
                ++ LLNNY+ GD  PS  V V+ L+ C
Sbjct: 109 KTCSSLQFLLNNYVFGDATPSAKVFVECLLEC 140


>ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [Amborella trichopoda]
           gi|548856757|gb|ERN14585.1| hypothetical protein
           AMTR_s00038p00140720 [Amborella trichopoda]
          Length = 855

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
 Frame = -2

Query: 479 MKLLVAFPSSSVH--SRLLVAF-----IPYKXXXXXXXXXSNEETTSIPLPNSDSIEANP 321
           + L   FPS S H  +R LV+F     I  +              T  PLP S       
Sbjct: 5   LSLQSPFPSISKHHPTRRLVSFSLSHHISSQPQISNGYLSQPCRCTQSPLPTSQFDREIL 64

Query: 320 TSEPQTSIKIPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIG 141
            S   TS +I    +    NT L+Q  VV+ LLS+  D  +AL YF W E+QRGF+R + 
Sbjct: 65  LSLSNTS-QIDRQISLSHSNTVLTQEHVVEVLLSNQTDSKAALRYFRWAERQRGFIRGL- 122

Query: 140 DSFFVLIHILVSSRNHHGP-VRNLLNNYLSGDFAPSGAVLVDRLI 9
           +   V++HIL  +RN   P  RNL+ + LS + +   +  +DRL+
Sbjct: 123 EPLCVVLHIL--ARNKDLPAARNLIKHSLSANSSIGASAFIDRLL 165


>ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
           gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis
           thaliana] gi|28393168|gb|AAO42016.1| unknown protein
           [Arabidopsis thaliana] gi|332645801|gb|AEE79322.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 851

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
 Frame = -2

Query: 326 NPTSEPQTSIKIPTCQ-TPISENTRL--------SQAFVVDTLLSHINDPSSALEYFNWV 174
           NP+ E +  +   T +  P++    L          A V+D LL+  N+P +AL ++NW 
Sbjct: 37  NPSQEQRLLVYGSTSEENPVTSKVSLLSAKPEQKDDASVIDVLLNRRNNPEAALRFYNWA 96

Query: 173 EKQRGFVREIGDSFFVLIHILVSSRNHHGPVRNLLNNYLS-GDFAPSGAVLVDRLIN 6
              RG   + GD F+VLIHILVSS   +G   +LL  Y+S  +  P  +VLV +L++
Sbjct: 97  RPWRGSFED-GDVFWVLIHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVD 152


>ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322117|gb|EFH52538.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 850

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
 Frame = -2

Query: 326 NPTSEPQTSIKIPTCQTPISENTRL--------SQAFVVDTLLSHINDPSSALEYFNWVE 171
           NP+ E +      + + P++    L          A V+D LL+  N+P +AL ++NW  
Sbjct: 37  NPSQEQRLVCGSTSEENPVTSKVSLLAAKPEQKDDASVIDVLLNRRNNPEAALRFYNWAR 96

Query: 170 KQRGFVREIGDSFFVLIHILVSSRNHHGPVRNLLNNYLS-GDFAPSGAVLVDRLIN 6
             RG   E GD F+VLIHILV+S   +G   +LL  Y+S  +  P  +VLV  L++
Sbjct: 97  PWRGSF-EDGDVFWVLIHILVTSPETYGRASDLLIRYVSTSNPTPMASVLVSNLVD 151


>ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Capsella rubella]
           gi|565465250|ref|XP_006290589.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
           gi|482559295|gb|EOA23486.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
           gi|482559296|gb|EOA23487.1| hypothetical protein
           CARUB_v10016679mg [Capsella rubella]
          Length = 862

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = -2

Query: 239 VVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGPVRNLLNNY 60
           V+D LL+  N+P SAL ++NW    RG   + GD F+VL+H+LV S   +G  R+LL  Y
Sbjct: 77  VIDVLLNRRNNPESALRFYNWARPWRGSFED-GDVFWVLVHVLVGSPETYGRARDLLMRY 135

Query: 59  LS-GDFAPSGAVLVDRLIN 6
           +S  +  P  +VLV  L++
Sbjct: 136 VSTSNPTPMPSVLVSNLVD 154


>ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325627|gb|EFH56047.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 867

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/104 (38%), Positives = 57/104 (54%)
 Frame = -2

Query: 317 SEPQTSIKIPTCQTPISENTRLSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGD 138
           S P  S  I T +T    +  +  A V++ LL   NDP SAL+Y NWV+  R    E GD
Sbjct: 60  SGPNHSPLISTSET----DNHVDDAHVIEVLLGRRNDPVSALQYCNWVKPLRSLC-EGGD 114

Query: 137 SFFVLIHILVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLIN 6
            F+VLIHIL SS + H    NLL  ++S +     + +V+ L++
Sbjct: 115 VFWVLIHILFSSPHTHDRASNLLVMFVSSNPTLIPSAMVNNLVD 158


>ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Capsella rubella]
           gi|482562372|gb|EOA26562.1| hypothetical protein
           CARUB_v10022620mg [Capsella rubella]
          Length = 861

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
 Frame = -2

Query: 299 IKIPTCQTPISENTR---LSQAFVVDTLLSHINDPSSALEYFNWVEKQRGFVREIGDSFF 129
           + +P+  T  SEN     +  A V++ LL   NDP SAL+Y NWV K    + E GD F+
Sbjct: 65  VHLPSISTLDSENQGGDDVDDARVIEVLLGRRNDPVSALQYCNWV-KPLPHLYEGGDVFW 123

Query: 128 VLIHILVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDRLI 9
           VL+HIL SS + H    NLL  ++S +     +V+V+ L+
Sbjct: 124 VLVHILFSSPHTHDRASNLLVMFVSSNPTLIPSVIVNYLV 163


>ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidopsis thaliana]
           gi|75100007|sp|O80958.1|PP194_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
           gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis
           thaliana] gi|330254554|gb|AEC09648.1| pentatricopeptide
           repeat protein LOJ [Arabidopsis thaliana]
          Length = 867

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 44/123 (35%), Positives = 65/123 (52%)
 Frame = -2

Query: 374 EETTSIPLPNSDSIEANPTSEPQTSIKIPTCQTPISENTRLSQAFVVDTLLSHINDPSSA 195
           E  +++  P+  S+   P   P TS       T  +EN  +  A V++ LL   NDP SA
Sbjct: 48  ETISTLEFPHKTSV---PNHSPLTS-------TSETEN-HVDDARVIEVLLGRRNDPVSA 96

Query: 194 LEYFNWVEKQRGFVREIGDSFFVLIHILVSSRNHHGPVRNLLNNYLSGDFAPSGAVLVDR 15
           L+Y NWV+       E GD F+VLIHIL+SS + H    NLL  ++S +      V+V+ 
Sbjct: 97  LQYCNWVKPLHRLC-EGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNN 155

Query: 14  LIN 6
           L++
Sbjct: 156 LVD 158