BLASTX nr result

ID: Rehmannia24_contig00027053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00027053
         (587 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGZ16400.1| MYB7 [Scutellaria baicalensis]                          86   9e-15
ref|XP_006354368.1| PREDICTED: transcription factor RAX2-like [S...    72   1e-10
gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japo...    60   5e-07

>gb|AGZ16400.1| MYB7 [Scutellaria baicalensis]
          Length = 280

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 73/187 (39%), Positives = 96/187 (51%), Gaps = 21/187 (11%)
 Frame = -2

Query: 586 IAAQLPGRTDNDIKNYWNTXXXXXXLQYDQKMPDQATTTFPLIIPXXXXXXXXXXXXLPI 407
           IA QLPGRTDNDIKN+WNT      L +  K   Q     PLI              +  
Sbjct: 93  IAGQLPGRTDNDIKNHWNTKLKKKLLGFAHKNYFQ----LPLINTSSFLQTSSISSPILH 148

Query: 406 SDYSPT-YQISSSPYDQFGNNTIISSSNH---LSVPSVHDGN------LGFQS------- 278
           S  SP  +++S +P   F   +++ +  H        V +GN       G ++       
Sbjct: 149 SQISPPIFELSENPSSSFTAPSLLEAPMHGHNYGYAPVKEGNHNNLLIFGGETSHGKKME 208

Query: 277 --YFNIDDGNDDQKFLTS-APDEKGENGNCFSEINPLD-YSIEEIKQLISTNNICNNMDF 110
             Y N  D  ++ KFL S +   +GENGN  SE N LD YS+E+IKQLISTN+ICNN++F
Sbjct: 209 GYYSNGVDHVENHKFLISESHGGEGENGNFISE-NLLDNYSMEDIKQLISTNHICNNLNF 267

Query: 109 FHVDEIK 89
           F VDEIK
Sbjct: 268 F-VDEIK 273


>ref|XP_006354368.1| PREDICTED: transcription factor RAX2-like [Solanum tuberosum]
          Length = 300

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 63/204 (30%), Positives = 86/204 (42%), Gaps = 38/204 (18%)
 Frame = -2

Query: 586 IAAQLPGRTDNDIKNYWNT----------------XXXXXXLQYDQKMPDQATTTFPLII 455
           IAAQLPGRTDNDIKNYWNT                       QY  ++P      +   I
Sbjct: 93  IAAQLPGRTDNDIKNYWNTKLKKKLMGFVSSSHKIISPLNHYQYQHQIPTNCYNNYSSQI 152

Query: 454 PXXXXXXXXXXXXLPISDYSPTYQI-------SSSPYDQFGNNTIISSSNHLSV------ 314
                         P +   P Y+        SS+ +   G +T  +S N  S       
Sbjct: 153 SLLQAPSLLISSNYPNNTTFPCYETNIPSTIPSSTSFLSAGASTSCTSGNTTSTFAGPTT 212

Query: 313 ---PSVHDGNLGFQSYFNIDDG--NDDQKFLTSAPDEKGENGNCF--SEINPLDY-SIEE 158
               S    N  F SY   ++G  ++ +K ++         G C+   + NPLDY S+EE
Sbjct: 213 PSEESYDISNFNFHSYMYNNNGAISEGEKLISG-----NNGGGCYVDEQQNPLDYSSLEE 267

Query: 157 IKQLISTNNI-CNNMDFFHVDEIK 89
           IK LISTN++ CN+ +F    EIK
Sbjct: 268 IKDLISTNHVTCNSNNFLLDHEIK 291


>gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japonicus]
          Length = 224

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 62/189 (32%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
 Frame = -2

Query: 586 IAAQLPGRTDNDIKNYWNT-----XXXXXXLQYDQKMPDQATTTFPLIIPXXXXXXXXXX 422
           IA++LPGRTDNDIKNYWNT               +K P QA  TF  I+           
Sbjct: 27  IASRLPGRTDNDIKNYWNTKLKKKMMMAMNHSAVRKPPQQA--TFLSILQNSTPSSSNSF 84

Query: 421 XXLPISDYSP----TYQISSSPYDQFGNNTIISSS---------NHLSVPSVHDGNLGFQ 281
                S   P     +Q SS+ +   G  T  SSS         +H++ P +  G     
Sbjct: 85  FQAQESFIHPPQKFQFQFSSNSFVFGGETTSCSSSSDGSCNNKTSHVTEPDLGYGEGCVG 144

Query: 280 SYFNIDDG---------NDDQKFLTSAPDEKG---ENGNCFSEINPLDYSIEEIKQLIST 137
           S F    G          D QK + +  D      E  N   E NP+D  +EEIK+LIST
Sbjct: 145 STFMEQIGGVDYLYNGVEDTQKLMFNNGDGVSGWTEKQNGLWEENPMDNGLEEIKELIST 204

Query: 136 NNICNNMDF 110
           ++ CNN  F
Sbjct: 205 SS-CNNFLF 212


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