BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026696
         (390 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY16117.1| Pentatricopeptide repeat (PPR) superfamily protei...    56   4e-06
ref|XP_006472673.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>gb|EOY16117.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 620

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
 Frame = -1

Query: 387 PHIFLYQNQPPYLVDAQPSNLPKHKKHSQKTKCCSATSHSHSLNFSMSEDLPLLTQY-YS 211
           P + L+Q QP      +PS    + K   KT   ++T +    +   S D   L ++ +S
Sbjct: 9   PQVTLFQ-QPSNSTIQKPSFRCSNSKTQSKT---TSTKNPPQFSCFCSTDSCFLPEFDHS 64

Query: 210 VSTSPENFEGSDNVLLYNSNPTKRFINSSTAGHWLQSCSNVEEIRKIHAVVVKLVKDPLP 31
           +S S  + +     +        R ++S      LQSC NV + R++HAVV+K +K+P  
Sbjct: 65  ISVSASHEDPDAGFMDITPPSVSRSVDSDDLAALLQSCYNVRQARRVHAVVLKRLKNPGT 124

Query: 30  FVYNNMISMY 1
           +V NN+IS+Y
Sbjct: 125 YVENNLISVY 134


>ref|XP_006472673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Citrus sinensis]
          Length = 620

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
 Frame = -1

Query: 363 QPPYLVDAQPSNLPKHKKHSQKTKCCSATSHSHSLNFSMSEDLPLLTQYYSVSTSPENFE 184
           Q   L++ QP   PK +KHS KT   +   + +       E     T ++    S ++F 
Sbjct: 15  QQSSLLNIQPLQSPK-QKHSSKTINSNYQKNPNDCRCFYRETTNSHTNFHK---SSDDFS 70

Query: 183 GSDNVLLYNSNP--TKRFINSSTAGHWLQSCSNVEEIRKIHAVVVKLVKDPLPFVYNNMI 10
             DN    +S+     + ++S+    WL+SC+ V+++++IHA+V+K ++  + +V NN+I
Sbjct: 71  LQDNADAESSHAPSVSQSVDSNLLAIWLRSCNTVKQVKRIHAIVLKSLRKSVLYVDNNLI 130

Query: 9   SMY 1
           S+Y
Sbjct: 131 SVY 133