BLASTX nr result
ID: Rehmannia24_contig00026569
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00026569
(384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006287901.1| hypothetical protein CARUB_v10001135mg [Caps... 57 3e-06
ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arab... 57 3e-06
ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thalia... 57 3e-06
emb|CAB39939.1| putative protein [Arabidopsis thaliana] gi|72678... 57 3e-06
ref|XP_002509740.1| cleavage and polyadenylation specificity fac... 57 3e-06
ref|XP_006857849.1| hypothetical protein AMTR_s00069p00064990 [A... 56 4e-06
gb|AFW59158.1| putative RING zinc finger domain superfamily prot... 56 4e-06
ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 56 4e-06
ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 56 4e-06
ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 56 4e-06
ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selag... 56 4e-06
ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Sela... 56 4e-06
emb|CBI34726.3| unnamed protein product [Vitis vinifera] 56 4e-06
gb|ACN40787.1| unknown [Picea sitchensis] 56 4e-06
ref|XP_001754436.1| predicted protein [Physcomitrella patens] gi... 56 4e-06
ref|XP_001784296.1| predicted protein [Physcomitrella patens] gi... 56 4e-06
ref|XP_006477422.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 56 6e-06
ref|XP_006477421.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 56 6e-06
ref|XP_006477419.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 56 6e-06
ref|XP_006339453.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 56 6e-06
>ref|XP_006287901.1| hypothetical protein CARUB_v10001135mg [Capsella rubella]
gi|482556607|gb|EOA20799.1| hypothetical protein
CARUB_v10001135mg [Capsella rubella]
Length = 395
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIGLAVCCCLPCIIAILYAVADQ G
Sbjct: 270 CVIGLAVCCCLPCIIAILYAVADQEG 295
>ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata] gi|297320548|gb|EFH50970.1| hypothetical protein
ARALYDRAFT_327304 [Arabidopsis lyrata subsp. lyrata]
Length = 420
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIGLAVCCCLPCIIAILYAVADQ G
Sbjct: 264 CVIGLAVCCCLPCIIAILYAVADQEG 289
>ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3
ubiquitin-protein ligase At4g11680; AltName: Full=RING
finger protein At4g11680 gi|16323218|gb|AAL15343.1|
AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110
[Arabidopsis thaliana] gi|66865946|gb|AAY57607.1| RING
finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase
[Arabidopsis thaliana]
Length = 390
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIGLAVCCCLPCIIAILYAVADQ G
Sbjct: 262 CVIGLAVCCCLPCIIAILYAVADQEG 287
>emb|CAB39939.1| putative protein [Arabidopsis thaliana] gi|7267868|emb|CAB78211.1|
putative protein [Arabidopsis thaliana]
Length = 419
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIGLAVCCCLPCIIAILYAVADQ G
Sbjct: 262 CVIGLAVCCCLPCIIAILYAVADQEG 287
>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223549639|gb|EEF51127.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVGNVVKSCSCSNEQKFCHAD 253
C+IG+AVCCCLPCIIAILYAVADQ G + ++ KF D
Sbjct: 246 CIIGIAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFKFRRVD 289
>ref|XP_006857849.1| hypothetical protein AMTR_s00069p00064990 [Amborella trichopoda]
gi|548861951|gb|ERN19316.1| hypothetical protein
AMTR_s00069p00064990 [Amborella trichopoda]
Length = 383
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 240 CVIGIAVCCCLPCIIAILYAVADQEG 265
>gb|AFW59158.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 291
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVGNVVKSC 289
C+IG+AVCCCLPCIIAILYAV+DQV + KSC
Sbjct: 246 CIIGIAVCCCLPCIIAILYAVSDQVW-LFKSC 276
>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 257 CVIGIAVCCCLPCIIAILYAVADQEG 282
>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 248 CVIGIAVCCCLPCIIAILYAVADQEG 273
>ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 237 CVIGIAVCCCLPCIIAILYAVADQEG 262
>ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein
SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 227 CVIGIAVCCCLPCIIAILYAVADQEG 252
>ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein
SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 227 CVIGIAVCCCLPCIIAILYAVADQEG 252
>emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 134 CVIGIAVCCCLPCIIAILYAVADQEG 159
>gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 262 CVIGIAVCCCLPCIIAILYAVADQEG 287
>ref|XP_001754436.1| predicted protein [Physcomitrella patens]
gi|162694538|gb|EDQ80886.1| predicted protein
[Physcomitrella patens]
Length = 338
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 207 CVIGIAVCCCLPCIIAILYAVADQEG 232
>ref|XP_001784296.1| predicted protein [Physcomitrella patens]
gi|162664172|gb|EDQ50902.1| predicted protein
[Physcomitrella patens]
Length = 296
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
CVIG+AVCCCLPCIIAILYAVADQ G
Sbjct: 160 CVIGIAVCCCLPCIIAILYAVADQEG 185
>ref|XP_006477422.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X5
[Citrus sinensis]
Length = 380
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
C+IG+AVCCCLPCIIAILYAVADQ G
Sbjct: 244 CIIGIAVCCCLPCIIAILYAVADQEG 269
>ref|XP_006477421.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X4
[Citrus sinensis]
Length = 381
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
C+IG+AVCCCLPCIIAILYAVADQ G
Sbjct: 245 CIIGIAVCCCLPCIIAILYAVADQEG 270
>ref|XP_006477419.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2
[Citrus sinensis]
Length = 386
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVG 307
C+IG+AVCCCLPCIIAILYAVADQ G
Sbjct: 250 CIIGIAVCCCLPCIIAILYAVADQEG 275
>ref|XP_006339453.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Solanum
tuberosum]
Length = 383
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = -1
Query: 384 CVIGLAVCCCLPCIIAILYAVADQVGNVVKSCSCSNEQKF 265
C+IG+AVCCCLPCIIAILYAVADQ G + + KF
Sbjct: 247 CLIGIAVCCCLPCIIAILYAVADQEGATKEDVERLTKYKF 286