BLASTX nr result

ID: Rehmannia24_contig00026282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026282
         (734 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354642.1| PREDICTED: suppressor protein SRP40-like [So...    58   3e-06

>ref|XP_006354642.1| PREDICTED: suppressor protein SRP40-like [Solanum tuberosum]
          Length = 501

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
 Frame = +2

Query: 203 GSILNRTKRKLSSLFCGVLTSKSTFQKLEECPEKSSISCTEYLTPFDAPQNSTLEPSSVI 382
           GS   R+K K SS FCG  ++     +LE+ P+             D  +NS  E SS  
Sbjct: 26  GSRPKRSKLKFSSFFCGGASTSQLDHELEDYPQP---------LVGDFSRNSIAESSSTF 76

Query: 383 TSETGDMRTIHQNGDSSERNSCVIEEAFLESDLLNVQTSRDFEPLPHQ------PAQESV 544
           +SE G   T  + G SSE  S +  +AF+E +L+N + + +   + ++       A++S+
Sbjct: 77  SSEVGHA-TQPETGSSSESTSGLSHDAFVEYNLINAEVNINNTCISNEKHSICDQARDSL 135

Query: 545 SAAVDARAMTGSTTFIRSGHDQSTSQAEGPTISQAYSDDLDYNQDAVVGYNGPDLRSLSI 724
           +AAV   ++T   T      + S +  E    S ++ D ++ + D  +  +  D RS+S+
Sbjct: 136 AAAVSTESLTHLNT------EDSHTVPEECRSSCSHGDSIENHGDVHI-ESSSDSRSISV 188

Query: 725 VSD 733
            SD
Sbjct: 189 TSD 191


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