BLASTX nr result

ID: Rehmannia24_contig00026242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026242
         (383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein...    61   1e-07
ref|XP_006357506.1| PREDICTED: putative F-box/LRR-repeat protein...    59   5e-07
ref|XP_006357505.1| PREDICTED: putative F-box/LRR-repeat protein...    59   5e-07
ref|XP_006357504.1| PREDICTED: putative F-box/LRR-repeat protein...    59   5e-07
gb|EXB62300.1| F-box/LRR-repeat protein 13 [Morus notabilis]           59   7e-07
ref|XP_004243807.1| PREDICTED: putative F-box/LRR-repeat protein...    59   7e-07
ref|XP_006357510.1| PREDICTED: putative F-box protein At1g49610-...    58   1e-06
ref|XP_006357508.1| PREDICTED: putative F-box protein At1g49610-...    58   1e-06
ref|XP_004233818.1| PREDICTED: putative FBD-associated F-box pro...    58   2e-06
ref|XP_006493514.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    56   4e-06
ref|XP_004486796.1| PREDICTED: uncharacterized protein LOC101499...    55   1e-05

>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like
           [Cucumis sativus] gi|449503744|ref|XP_004162155.1|
           PREDICTED: putative F-box/LRR-repeat protein
           At3g18150-like [Cucumis sativus]
          Length = 512

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 110 YKLP-DVFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFLE 286
           Y+LP  +  + YL +L L  C      +I L +L  L L E+ L+D+ M  IL+GCP LE
Sbjct: 167 YELPTSILTNKYLKELSLTGCGIEEKGRIQLTSLSKLSLKEIMLSDKIMGEILIGCPMLE 226

Query: 287 DLSVVDCYGLSQLKSENPNSRKLML 361
           +LS+  C GL +LK    N ++L +
Sbjct: 227 ELSLDGCCGLHKLKLTTSNIKRLKI 251


>ref|XP_006357506.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like isoform
           X3 [Solanum tuberosum]
          Length = 454

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 107 IYKLPD-VFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFL 283
           +Y LP+ V  S +L++L L  C   + +K  L +L+ L+L  V L D++M+ IL GCP L
Sbjct: 134 LYDLPNCVLSSPHLVELWLTHCTINAKKKSKLKSLKTLYLNNVVLMDQSMDYILSGCPML 193

Query: 284 EDLSVVDCYGLSQLKSENPNSRKLMLSL 367
           E+L++  CYG  ++   N N + L L +
Sbjct: 194 EELTLQLCYGHIRVVLLNSNLKTLKLDI 221


>ref|XP_006357505.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like isoform
           X2 [Solanum tuberosum]
          Length = 466

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 107 IYKLPD-VFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFL 283
           +Y LP+ V  S +L++L L  C   + +K  L +L+ L+L  V L D++M+ IL GCP L
Sbjct: 146 LYDLPNCVLSSPHLVELWLTHCTINAKKKSKLKSLKTLYLNNVVLMDQSMDYILSGCPML 205

Query: 284 EDLSVVDCYGLSQLKSENPNSRKLMLSL 367
           E+L++  CYG  ++   N N + L L +
Sbjct: 206 EELTLQLCYGHIRVVLLNSNLKTLKLDI 233


>ref|XP_006357504.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like isoform
           X1 [Solanum tuberosum]
          Length = 493

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 107 IYKLPD-VFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFL 283
           +Y LP+ V  S +L++L L  C   + +K  L +L+ L+L  V L D++M+ IL GCP L
Sbjct: 173 LYDLPNCVLSSPHLVELWLTHCTINAKKKSKLKSLKTLYLNNVVLMDQSMDYILSGCPML 232

Query: 284 EDLSVVDCYGLSQLKSENPNSRKLMLSL 367
           E+L++  CYG  ++   N N + L L +
Sbjct: 233 EELTLQLCYGHIRVVLLNSNLKTLKLDI 260


>gb|EXB62300.1| F-box/LRR-repeat protein 13 [Morus notabilis]
          Length = 687

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/77 (35%), Positives = 49/77 (63%)
 Frame = +2

Query: 140 YLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFLEDLSVVDCYGLS 319
           +L  L+L AC    CE + LP+L+ + L  V ++DE ++R++   P LEDL++  C+ + 
Sbjct: 174 HLTSLKLKACYCGPCENVYLPSLKTMSLIYVLISDEMLQRLITNSPKLEDLNIEHCFDMV 233

Query: 320 QLKSENPNSRKLMLSLR 370
            L+  NP+ R+L+++ R
Sbjct: 234 VLRVFNPSLRRLVVASR 250


>ref|XP_004243807.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like
           [Solanum lycopersicum]
          Length = 502

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +2

Query: 107 IYKLPD-VFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFL 283
           +Y LP+ V  S +L++LRL  C   + +K  L +L+ L+L +V L  ++++ IL GCP L
Sbjct: 172 LYDLPNCVLNSPHLVELRLTHCTINAKKKSKLKSLKTLYLNKVVLMGQSIDYILSGCPML 231

Query: 284 EDLSVVDCYGLSQLKSENPNSRKLMLSL 367
           E+L++  CYG  ++   N N + L L +
Sbjct: 232 EELTLQLCYGHIRVVVLNSNLKTLKLDI 259


>ref|XP_006357510.1| PREDICTED: putative F-box protein At1g49610-like isoform X3
           [Solanum tuberosum]
          Length = 500

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +2

Query: 110 YKLPD-VFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFLE 286
           Y LP  V  S +L++LRL  C      K  L +L+ L+L  V L D++M  IL GCP LE
Sbjct: 171 YDLPSCVLSSPHLVELRLTYCKINLKRKSELKSLKTLYLDNVMLMDQSMNYILSGCPMLE 230

Query: 287 DLSVVDCYGLSQLKSENPNSRKLMLSLR 370
           +L++  CY   ++   N N + L L +R
Sbjct: 231 ELTLQLCYCRRRVVLLNSNLKTLKLDIR 258


>ref|XP_006357508.1| PREDICTED: putative F-box protein At1g49610-like isoform X1
           [Solanum tuberosum] gi|565382355|ref|XP_006357509.1|
           PREDICTED: putative F-box protein At1g49610-like isoform
           X2 [Solanum tuberosum]
          Length = 560

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +2

Query: 110 YKLPD-VFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFLE 286
           Y LP  V  S +L++LRL  C      K  L +L+ L+L  V L D++M  IL GCP LE
Sbjct: 171 YDLPSCVLSSPHLVELRLTYCKINLKRKSELKSLKTLYLDNVMLMDQSMNYILSGCPMLE 230

Query: 287 DLSVVDCYGLSQLKSENPNSRKLMLSLR 370
           +L++  CY   ++   N N + L L +R
Sbjct: 231 ELTLQLCYCRRRVVLLNSNLKTLKLDIR 258


>ref|XP_004233818.1| PREDICTED: putative FBD-associated F-box protein At5g22720-like
           [Solanum lycopersicum]
          Length = 341

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +2

Query: 110 YKLPDVFRSNYLIK-LRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFLE 286
           Y LP +  SN   + + L  C+    E IN P+L+IL + +  LN + ++ I  GCP LE
Sbjct: 163 YNLPQILYSNACFREMSLCNCNLVPKEGINWPSLKILVIRKAELNSDIVDAICSGCPSLE 222

Query: 287 DLSVVDCYGLSQLKSENPNSRKLMLS 364
            L    CYG++  K  + + +KL++S
Sbjct: 223 SLKFSMCYGVNLFKINSESVKKLVIS 248


>ref|XP_006493514.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g00315-like
           [Citrus sinensis]
          Length = 483

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = +2

Query: 110 YKLPDVFRSN--YLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFL 283
           Y LP V  S+  +L+ L +  C   + +K++LP L+ + L  V + +  +ER++  CP L
Sbjct: 132 YALPRVIFSSGSFLVSLTIRHCKIGAYQKVSLPLLQNMKLISVHVTNYPLERVIRNCPDL 191

Query: 284 EDLSVVDCYGLSQLKSENPNSRKLML 361
           E L++  C+G   LK  NP+ R+L++
Sbjct: 192 ETLTLEYCHGFDTLKLFNPSVRRLVV 217


>ref|XP_004486796.1| PREDICTED: uncharacterized protein LOC101499924 isoform X1 [Cicer
           arietinum] gi|502081202|ref|XP_004486797.1| PREDICTED:
           uncharacterized protein LOC101499924 isoform X2 [Cicer
           arietinum] gi|502081205|ref|XP_004486798.1| PREDICTED:
           uncharacterized protein LOC101499924 isoform X3 [Cicer
           arietinum]
          Length = 656

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +2

Query: 110 YKLPD-VFRSNYLIKLRLAACDFRSCEKINLPALRILFLYEVSLNDEAMERILLGCPFLE 286
           Y +PD VF S  L  LR++ C  +SC  I LP L+ L+L ++ L +  +  ++  CP +E
Sbjct: 251 YTVPDIVFSSQTLTGLRISGCILQSCSNITLPHLQKLYLRKIHLAEHIVLNLISCCPSIE 310

Query: 287 DLSVVDCYGLSQL 325
           DL  + C GL  L
Sbjct: 311 DLRFIQCSGLKYL 323


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