BLASTX nr result
ID: Rehmannia24_contig00026179
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00026179
(1302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp... 284 6e-74
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp... 273 1e-70
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp... 250 1e-63
gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus pe... 236 2e-59
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm... 234 5e-59
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr... 215 4e-53
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp... 211 7e-52
gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative ... 206 1e-50
gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative ... 206 1e-50
gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative ... 206 1e-50
gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative ... 206 1e-50
gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative ... 206 1e-50
gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitat... 205 3e-50
gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlise... 202 2e-49
ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, part... 201 6e-49
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp... 198 4e-48
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp... 198 4e-48
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp... 198 4e-48
ref|XP_006400150.1| hypothetical protein EUTSA_v10012836mg [Eutr... 197 1e-47
ref|NP_197122.2| chloroplast splicing factor CRS1-like protein [... 194 9e-47
>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum tuberosum]
Length = 802
Score = 284 bits (726), Expect = 6e-74
Identities = 176/385 (45%), Positives = 233/385 (60%), Gaps = 7/385 (1%)
Frame = +3
Query: 114 MSASPFLTHFSNAITPFLYNPSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSA 293
MSA L SN + N L S F +FSS ++N + E+ +
Sbjct: 1 MSAPLVLAPNSNTLCYHHSNSFINQKTLLFSKSFNSKFTSFSSQYNDNNNPIKNEEQYNL 60
Query: 294 KYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGE 473
++E D Y SS S IK PTAPWM PLL++PN+ ++ +K R KKD + +
Sbjct: 61 EFENQD-YGSSS-------SGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKT-Q 111
Query: 474 HPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGN 644
+P+ AL+GKV G RGK AMK I++GI+KLQET E +T ++F+F PG L WG+
Sbjct: 112 NPNDALSGKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGD 171
Query: 645 GVYESDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXX---PWERDERMVIRRVKK 812
YE + E Y EE + SLE EF + PWE + R+V RR+KK
Sbjct: 172 VSYEIE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKK 230
Query: 813 EKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFD 992
EKVV AES LD +LLERLR EAA I+KWVKVKKAGVT+ VVDQ+HFIW+NNELA+LKFD
Sbjct: 231 EKVVMTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFD 290
Query: 993 IPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSS 1172
+PLC+NMDRA+EIVEMKTGG VVW ++ L VYRG Y K +++ + + +NSS
Sbjct: 291 LPLCRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSYTLQQKELQH---DFLCSHQNSS 347
Query: 1173 STMNYQNTTTFARVSSDGSSLDDTI 1247
T N + T+ F+ ++S GSS D+ I
Sbjct: 348 FTENIKQTSIFSPLNSSGSSEDEMI 372
>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum lycopersicum]
Length = 766
Score = 273 bits (697), Expect = 1e-70
Identities = 171/365 (46%), Positives = 222/365 (60%), Gaps = 8/365 (2%)
Frame = +3
Query: 114 MSASPFLTHFSNAITPFLYNPSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSA 293
MSA+ + SN + N L S F TFSS ++N + K+E+ +
Sbjct: 1 MSATLLVAPNSNTLCCHHANSFINQKTLLFSKSFNSKFTTFSSQSNDNNNPIKKVEQCNL 60
Query: 294 KYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGE 473
++E D Y SS S IK PTAPWM PLL++PN++++ +K R KKD + +
Sbjct: 61 EFENQD-YGSSS-------SGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKT-Q 111
Query: 474 HPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLK--FKFAPGDL--WG 641
+P+ AL+GKV G RGK AMK I++GI+KLQET + E +Q ++K F+F PG L WG
Sbjct: 112 NPNDALSGKVSGGRGKKAMKMIYQGIDKLQETQ-IGECTQVETDVKVEFQFPPGSLSGWG 170
Query: 642 NGVYESDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXX---PWERDERMVIRRVK 809
+ YE + E Y EE + SLE EF + PWE +ER+V RR+K
Sbjct: 171 DVSYEIE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMK 229
Query: 810 KEKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKF 989
KEKVV AES LD +LLERLR EAA I+KWVKVKKAGVT+ VVDQ+ FIW+NNELA+LKF
Sbjct: 230 KEKVVRTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKF 289
Query: 990 DIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENS 1169
D+PLC+NMDRA++IVEMKTGG VVW ++ L VYRG YE SVG+ E
Sbjct: 290 DLPLCRNMDRARDIVEMKTGGFVVWMKQNALVVYRG--YE----------MISVGNSEED 337
Query: 1170 SSTMN 1184
S MN
Sbjct: 338 SLVMN 342
>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 250 bits (638), Expect = 1e-63
Identities = 149/367 (40%), Positives = 205/367 (55%), Gaps = 9/367 (2%)
Frame = +3
Query: 186 PTPFLSSNPSKYNFITFSS-----PPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSG 350
P P S PS N ++ SS P + I + H ++ SS+ +
Sbjct: 11 PIPNHSQFPSNSNSLSNSSIRILNPQRIHSFKPPPISATTTATTNHPDHSISSQPVSGTD 70
Query: 351 STIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENG-EHPDMALTGKVGGARGKVA 527
+ IK PTAPWM PLL++PNE+++ +K R KK G G E PD +LT KV G RG A
Sbjct: 71 AAIKMPTAPWMKGPLLLQPNEVLDLSKARPKK--VAGSAGAEKPDRSLTEKVSGGRGAKA 128
Query: 528 MKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLE 707
MKKI + I KLQETH +E + E +F +SLE
Sbjct: 129 MKKIMQSIVKLQETHTSDETQENTEEFEFG--------------------------VSLE 162
Query: 708 STEFDIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAAM 887
D PW + E++V RR KKEKVVTAAE LD +LLERLR EA
Sbjct: 163 GIGGD------ENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVK 216
Query: 888 IRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWR 1067
+RKWVKVKKAGVT++VVDQ+H +W+++ELA++KFD+PLC+NMDRA+EI+E+KT G+V+W
Sbjct: 217 MRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWS 276
Query: 1068 NKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTM---NYQNTTTFARVSSDGSSLD 1238
KD L VYRG Y+S SKH + +R V + S+S + N+++ T + + S+
Sbjct: 277 KKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTG 336
Query: 1239 DTIHGKD 1259
+ + KD
Sbjct: 337 EKMGRKD 343
>gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
Length = 809
Score = 236 bits (601), Expect = 2e-59
Identities = 148/362 (40%), Positives = 201/362 (55%), Gaps = 8/362 (2%)
Frame = +3
Query: 114 MSASPFLTHFSNAITPFLYNPSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSA 293
M A+ FLT S + PS PF S NP +S P N I KS
Sbjct: 1 MPATLFLTPLSTLPNITHHLPSHSNPPFHSYNPISS---ALNSKPPQNPKPTNPIPSKSP 57
Query: 294 KYETHDSYTKS------SESTPHSGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFT 455
+ S T + SE + + IKAPTAPWM PLL++P+E+++F+K R KK
Sbjct: 58 NSLSLSSTTTTPNSKAPSEPNSSTDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHN 117
Query: 456 IGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDL 635
E PD L GK+ G RG A+K+I + IE+L +E + F +
Sbjct: 118 -NAKAEKPDTVLAGKLVGIRGDKAIKQIVQSIERLGPNQKTDETQKG-------FGEFRI 169
Query: 636 WGN--GVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXXPWERDERMVIRRVK 809
W + G+ +++ + + + V+ + + A PWERDER+V +R+K
Sbjct: 170 WDSLEGLGQNEKWDETHKDFVEFGIGGCLEGLGKAADSRFGGKM--PWERDERIVFQRIK 227
Query: 810 KEKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKF 989
K++V +AAE L+ LLERLR EAA +RKWVKVKKAGVTQA+VD + FIW+ NELA++KF
Sbjct: 228 KKRVASAAELSLEKELLERLRAEAAKMRKWVKVKKAGVTQAIVDDIKFIWKTNELAMVKF 287
Query: 990 DIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENS 1169
D+PLC+NM RAQEIVE KTGG+VVW KD L +YRG Y+S SK +R S +E
Sbjct: 288 DVPLCRNMHRAQEIVETKTGGMVVWGKKDTLVIYRGCNYQSSSKFFPKMRPCSADRQETL 347
Query: 1170 SS 1175
SS
Sbjct: 348 SS 349
>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical
protein [Ricinus communis]
Length = 742
Score = 234 bits (598), Expect = 5e-59
Identities = 141/322 (43%), Positives = 183/322 (56%), Gaps = 4/322 (1%)
Frame = +3
Query: 174 PSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGS 353
PS + F S NP I S P+ N+S+ + + +T S S +
Sbjct: 2 PSALFLQFFSYNP-----IASSLNPATNKSSLNNAQNPKFATNKNTEFTLLSVPNSQSNA 56
Query: 354 TIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMK 533
IK PTAPWM PLL++P+E++ +K R K N E D LTGK G RGK AM+
Sbjct: 57 PIKVPTAPWMKGPLLLQPHELINLSKPRNKNSSN-NANIEKSDKVLTGKESGVRGKKAME 115
Query: 534 KIFKGIEKLQETHDLEEI---SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSL 704
KI K IE+LQE LE+ SQ E + D+E E E++ L
Sbjct: 116 KIVKSIEQLQENQALEKTQCDSQAYEKTQL---------------DSEAFEIGEKLGLIR 160
Query: 705 ESTEFDIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAA 884
E +F + PWER+E+ V R+KKEK VT AE IL+ LLE LR EA+
Sbjct: 161 EHGDFGV---------NKKLKPWEREEKFVYWRIKKEKAVTKAELILEKELLEILRTEAS 211
Query: 885 MIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVW 1064
+RKWVKV KAGVTQ+VVDQ+ + WRNNELA++KFD+PLC+NMDRA+EIVE+KTGG+VVW
Sbjct: 212 KMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVW 271
Query: 1065 RNKDFLAVYRGRIYE-SGSKHI 1127
KD L +YRG Y + S H+
Sbjct: 272 TRKDSLVIYRGCNYHLTKSSHV 293
>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
gi|557532797|gb|ESR43980.1| hypothetical protein
CICLE_v10013368mg [Citrus clementina]
Length = 770
Score = 215 bits (547), Expect = 4e-53
Identities = 126/307 (41%), Positives = 181/307 (58%), Gaps = 3/307 (0%)
Frame = +3
Query: 360 KAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKI 539
K PTAPWM P++++P+EI++ +K +TKK F + D LT K G RGK AMKKI
Sbjct: 60 KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSF------KKTDKGLTAKESGVRGKQAMKKI 113
Query: 540 FKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEF 719
+ IEKLQ+ L+E +Q + KF+F G +E + +E
Sbjct: 114 IENIEKLQKDQILDE-TQKKDMEKFEF-------RGCFEENGSDEE-------------- 151
Query: 720 DIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKW 899
PW R+ER V RR+KKE++VT AE++LDG L+ERL++EA +RKW
Sbjct: 152 ------DLRGGFGGKVPWLREERFVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKW 205
Query: 900 VKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDF 1079
VKVKKAGVT++VV ++ WR NELA++KFD+PLC+NMDRA+EI+E+KTGG+V+W KD
Sbjct: 206 VKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDA 265
Query: 1080 LAVYRGRIYESGSKHIRNIRRNSVGDRE---NSSSTMNYQNTTTFARVSSDGSSLDDTIH 1250
VYRG GSK + S D+E + S+ ++ + + + S+ ++LD
Sbjct: 266 HVVYRG----DGSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRS 321
Query: 1251 GKDKWES 1271
KD E+
Sbjct: 322 LKDGEEN 328
>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 771
Score = 211 bits (536), Expect = 7e-52
Identities = 125/307 (40%), Positives = 179/307 (58%), Gaps = 3/307 (0%)
Frame = +3
Query: 360 KAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKI 539
K PTAPWM P++++P+EI++ +K +TKK F + D LT K G RGK AMKKI
Sbjct: 54 KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSF------KKTDKGLTAKESGVRGKQAMKKI 107
Query: 540 FKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEF 719
+ IEKLQ+ L+E +Q KF+F G +E + +E
Sbjct: 108 IENIEKLQKDQILDE-TQKKVMEKFEF-------KGCFEENVSHEE-------------- 145
Query: 720 DIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKW 899
PW R++R V RR+KKE++VT AE++LDG LLERL++EA +RKW
Sbjct: 146 ------DLRGGFGGKVPWLREDRFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKW 199
Query: 900 VKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDF 1079
VKVKKAGVT++VV ++ WR NELA++KFD+PLC+NMDRA+EI+E+KTGG+V+W KD
Sbjct: 200 VKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDA 259
Query: 1080 LAVYRGRIYESGSKHIRNIRRNSVGDRE---NSSSTMNYQNTTTFARVSSDGSSLDDTIH 1250
VYRG SK + S D+E + S+ ++ + + + S+ ++LD
Sbjct: 260 HVVYRG----DSSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRS 315
Query: 1251 GKDKWES 1271
KD E+
Sbjct: 316 LKDGEEN 322
>gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
cacao]
Length = 788
Score = 206 bits (525), Expect = 1e-50
Identities = 134/350 (38%), Positives = 199/350 (56%), Gaps = 5/350 (1%)
Frame = +3
Query: 228 ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 407
I FSS N+ N +K +++ + ++ S + P++G IK PTAPWM PLL++P
Sbjct: 49 IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 104
Query: 408 NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 587
+E++ +K +KK + + PD AL GK G RGK MKKI + +E LQ LE+
Sbjct: 105 HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 161
Query: 588 SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 767
T ++ +F G+ + SD EV+ + ++
Sbjct: 162 --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 192
Query: 768 PWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQ 944
PW R+E ++V RR+KKEK++T AE LD LLERLR +A +RKW+KV K GVT+AVVD+
Sbjct: 193 PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 252
Query: 945 VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1124
+ WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW KD L VYRG + SK
Sbjct: 253 IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 311
Query: 1125 IRNIRRNSVGD-RENSSSTMNY---QNTTTFARVSSDGSSLDDTIHGKDK 1262
I +++ D +E SSST ++ N + +GS+L ++ +D+
Sbjct: 312 ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDR 361
>gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
cacao]
Length = 767
Score = 206 bits (525), Expect = 1e-50
Identities = 134/350 (38%), Positives = 199/350 (56%), Gaps = 5/350 (1%)
Frame = +3
Query: 228 ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 407
I FSS N+ N +K +++ + ++ S + P++G IK PTAPWM PLL++P
Sbjct: 23 IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 78
Query: 408 NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 587
+E++ +K +KK + + PD AL GK G RGK MKKI + +E LQ LE+
Sbjct: 79 HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 135
Query: 588 SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 767
T ++ +F G+ + SD EV+ + ++
Sbjct: 136 --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 166
Query: 768 PWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQ 944
PW R+E ++V RR+KKEK++T AE LD LLERLR +A +RKW+KV K GVT+AVVD+
Sbjct: 167 PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 226
Query: 945 VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1124
+ WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW KD L VYRG + SK
Sbjct: 227 IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 285
Query: 1125 IRNIRRNSVGD-RENSSSTMNY---QNTTTFARVSSDGSSLDDTIHGKDK 1262
I +++ D +E SSST ++ N + +GS+L ++ +D+
Sbjct: 286 ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDR 335
>gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
cacao]
Length = 788
Score = 206 bits (525), Expect = 1e-50
Identities = 134/350 (38%), Positives = 199/350 (56%), Gaps = 5/350 (1%)
Frame = +3
Query: 228 ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 407
I FSS N+ N +K +++ + ++ S + P++G IK PTAPWM PLL++P
Sbjct: 23 IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 78
Query: 408 NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 587
+E++ +K +KK + + PD AL GK G RGK MKKI + +E LQ LE+
Sbjct: 79 HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 135
Query: 588 SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 767
T ++ +F G+ + SD EV+ + ++
Sbjct: 136 --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 166
Query: 768 PWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQ 944
PW R+E ++V RR+KKEK++T AE LD LLERLR +A +RKW+KV K GVT+AVVD+
Sbjct: 167 PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 226
Query: 945 VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1124
+ WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW KD L VYRG + SK
Sbjct: 227 IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 285
Query: 1125 IRNIRRNSVGD-RENSSSTMNY---QNTTTFARVSSDGSSLDDTIHGKDK 1262
I +++ D +E SSST ++ N + +GS+L ++ +D+
Sbjct: 286 ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDR 335
>gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
cacao]
Length = 804
Score = 206 bits (525), Expect = 1e-50
Identities = 134/350 (38%), Positives = 199/350 (56%), Gaps = 5/350 (1%)
Frame = +3
Query: 228 ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 407
I FSS N+ N +K +++ + ++ S + P++G IK PTAPWM PLL++P
Sbjct: 49 IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 104
Query: 408 NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 587
+E++ +K +KK + + PD AL GK G RGK MKKI + +E LQ LE+
Sbjct: 105 HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 161
Query: 588 SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 767
T ++ +F G+ + SD EV+ + ++
Sbjct: 162 --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 192
Query: 768 PWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQ 944
PW R+E ++V RR+KKEK++T AE LD LLERLR +A +RKW+KV K GVT+AVVD+
Sbjct: 193 PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 252
Query: 945 VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1124
+ WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW KD L VYRG + SK
Sbjct: 253 IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 311
Query: 1125 IRNIRRNSVGD-RENSSSTMNY---QNTTTFARVSSDGSSLDDTIHGKDK 1262
I +++ D +E SSST ++ N + +GS+L ++ +D+
Sbjct: 312 ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDR 361
>gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
cacao]
Length = 818
Score = 206 bits (525), Expect = 1e-50
Identities = 134/350 (38%), Positives = 199/350 (56%), Gaps = 5/350 (1%)
Frame = +3
Query: 228 ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 407
I FSS N+ N +K +++ + ++ S + P++G IK PTAPWM PLL++P
Sbjct: 49 IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 104
Query: 408 NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 587
+E++ +K +KK + + PD AL GK G RGK MKKI + +E LQ LE+
Sbjct: 105 HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 161
Query: 588 SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 767
T ++ +F G+ + SD EV+ + ++
Sbjct: 162 --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 192
Query: 768 PWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQ 944
PW R+E ++V RR+KKEK++T AE LD LLERLR +A +RKW+KV K GVT+AVVD+
Sbjct: 193 PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 252
Query: 945 VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1124
+ WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW KD L VYRG + SK
Sbjct: 253 IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 311
Query: 1125 IRNIRRNSVGD-RENSSSTMNY---QNTTTFARVSSDGSSLDDTIHGKDK 1262
I +++ D +E SSST ++ N + +GS+L ++ +D+
Sbjct: 312 ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDR 361
>gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 828
Score = 205 bits (522), Expect = 3e-50
Identities = 138/364 (37%), Positives = 189/364 (51%), Gaps = 2/364 (0%)
Frame = +3
Query: 171 NPSKIP-TPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHS 347
+PS P T LSSN F P + + + K Y H S ++ +S P
Sbjct: 8 SPSTFPNTHHLSSN--------FKRPSDSYILISSSLNPKPTNYHHHASTKENPDSKPPL 59
Query: 348 GSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVA 527
IK PT PWM PL+++P+E+ + +K F+ E LT K+ G RGK
Sbjct: 60 -EPIKMPTPPWMKGPLVLQPHEVTDLSKPENDNKFS-NRKAEKSVNGLTDKLVGRRGKNV 117
Query: 528 MKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGD-LWGNGVYESDAEVQEYSEEVQLSL 704
+KKI + IE+L ++ +T ++ K GD L G G S E
Sbjct: 118 IKKIARRIEELGRKSKVDS-EETQKDFVGKNGIGDCLEGLGESRSGGE------------ 164
Query: 705 ESTEFDIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAA 884
PWE+DE V RR+KKEK+V++AE L+ LLERLR+EA
Sbjct: 165 -------------------RMPWEKDEGFVFRRMKKEKIVSSAELRLERELLERLRSEAR 205
Query: 885 MIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVW 1064
+RKWVKVKKAGVT+ VV+ V F+W++NELA++KFD+PLC+NMDRAQEI+EMKTGG+VVW
Sbjct: 206 KMRKWVKVKKAGVTKEVVEDVKFVWKSNELAMVKFDVPLCRNMDRAQEILEMKTGGLVVW 265
Query: 1065 RNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNTTTFARVSSDGSSLDDT 1244
R KD +YRG Y+ SK G +E S + Q + S+ S ++T
Sbjct: 266 RRKDAQVIYRGCNYQPTSKTFPRTYAGFSGHQETPFSNL-VQLDSRKGNSVSEVKSYENT 324
Query: 1245 IHGK 1256
I K
Sbjct: 325 IERK 328
>gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlisea aurea]
Length = 668
Score = 202 bits (514), Expect = 2e-49
Identities = 122/281 (43%), Positives = 171/281 (60%), Gaps = 8/281 (2%)
Frame = +3
Query: 345 SGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKV 524
S ++ APTAPWM KPL V P+++++ K KK+ N + D L+ KVG R K+
Sbjct: 1 SSESVSAPTAPWMRKPLFVNPSQLLDLRKSPIKKN---SFNKQRLDKDLSEKVGNGRNKL 57
Query: 525 AMKKIFKGIEKLQETHDLEEISQT---PENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQ 695
AM++IF+GI+KLQE+ E + T P+N +FKF PG+L GN + + SE
Sbjct: 58 AMRQIFRGIKKLQESRPSSEAAATEGSPKNFEFKFRPGELSGNPQDSKNDGCERNSETTD 117
Query: 696 LSLESTEFDIPL--AXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAE-SILDGILLER 866
F IPL A PW+R+ V R ++ AA+ + +D +LLER
Sbjct: 118 ------GFCIPLREAAEGEEVRLKAMPWQREA--VGRMATNRPLMKAAKLNAIDELLLER 169
Query: 867 LRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNN--ELALLKFDIPLCQNMDRAQEIVEM 1040
L+NEAA +RKW+KVKK GVT VVDQVH WR++ +LALLKFD+PL + M RA+EIVEM
Sbjct: 170 LQNEAAKMRKWIKVKKLGVTPTVVDQVHSTWRSSRSQLALLKFDVPLNRCMSRAREIVEM 229
Query: 1041 KTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRE 1163
KTGG+ +W++KD +AVYRG ES + + +S+ +RE
Sbjct: 230 KTGGIAIWKSKDLIAVYRGS--ESSNAQQSSASFSSLYERE 268
>ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, partial [Capsella rubella]
gi|482555852|gb|EOA20044.1| hypothetical protein
CARUB_v10000322mg, partial [Capsella rubella]
Length = 726
Score = 201 bits (511), Expect = 6e-49
Identities = 122/302 (40%), Positives = 169/302 (55%), Gaps = 1/302 (0%)
Frame = +3
Query: 195 FLSSNPSKYNFITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTA 374
FLS+ S P+ N SN K + + K E+ HS + IK PTA
Sbjct: 34 FLSARAFPSLITNSSLNPNQNPSNAAKTPQ----------FDKFRENRGHSDAAIKVPTA 83
Query: 375 PWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIE 554
PWM PLL++P+EI++ KR + ++ E AL + G RG+ AMKKI + +E
Sbjct: 84 PWMKGPLLLRPDEILDAEKRNKPR-----KSEEKTFKALNRRESGVRGRKAMKKIVRNVE 138
Query: 555 KLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLA 734
KL E D ++ GDL E+ +++ E+TE
Sbjct: 139 KLDEDSDSQDTQM-----------GDL------------SEFDCLARIAEETTESS---- 171
Query: 735 XXXXXXXXXXXPWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVKVK 911
PWER+E R ++RR KKE+V T AE ILD LL +LR EA+ +RKWV V+
Sbjct: 172 ---EKRFGGRMPWEREEERFILRRTKKERVPTTAELILDEGLLNKLRREASKMRKWVNVR 228
Query: 912 KAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVY 1091
KAGVT+ VV+++ IWR+NELA+++FDIPLC+NM+RAQEI+EMKTGG+VV K+F+ VY
Sbjct: 229 KAGVTEPVVNEIRSIWRSNELAMVRFDIPLCRNMERAQEIIEMKTGGLVVLSKKEFVVVY 288
Query: 1092 RG 1097
RG
Sbjct: 289 RG 290
>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X5 [Glycine max]
Length = 744
Score = 198 bits (504), Expect = 4e-48
Identities = 135/323 (41%), Positives = 177/323 (54%), Gaps = 6/323 (1%)
Frame = +3
Query: 195 FLSSNPSKYN------FITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGST 356
FLS +PS + I+ S PP++N NG H+ S P
Sbjct: 3 FLSFHPSLFPNSYSRFHISSSLPPNSN--NG------------HNHQHTSPSQVP----- 43
Query: 357 IKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKK 536
IK+PT PWM PLL++P+E+++ + ++KK E E D AL GK RGK AMKK
Sbjct: 44 IKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKP--EKHELSDKALMGKE--VRGKRAMKK 99
Query: 537 IFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTE 716
I +EKL +T + E N++ G Y E+ + +EEV+
Sbjct: 100 IVDRVEKLHKTQNSNETRVDSLNVE---------NFGGY---LEILKENEEVRSK----- 142
Query: 717 FDIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRK 896
PWE+DE+ +VK+EK VTAAE LD LL RLRNEAA +R
Sbjct: 143 --------------GRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRT 188
Query: 897 WVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKD 1076
W+KVKKAGVTQ VVDQ+ WR NELA++KFDIPLC+NMDRA+EIVE KTGG+VV KD
Sbjct: 189 WIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKD 248
Query: 1077 FLAVYRGRIYESGSKHIRNIRRN 1145
FL VYRG ++ +K ++R N
Sbjct: 249 FLVVYRGCNHQLTTKGSPSLRTN 271
>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Glycine max]
gi|571550194|ref|XP_006603056.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X3 [Glycine max]
gi|571550197|ref|XP_006603057.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X4 [Glycine max]
Length = 747
Score = 198 bits (504), Expect = 4e-48
Identities = 135/323 (41%), Positives = 177/323 (54%), Gaps = 6/323 (1%)
Frame = +3
Query: 195 FLSSNPSKYN------FITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGST 356
FLS +PS + I+ S PP++N NG H+ S P
Sbjct: 3 FLSFHPSLFPNSYSRFHISSSLPPNSN--NG------------HNHQHTSPSQVP----- 43
Query: 357 IKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKK 536
IK+PT PWM PLL++P+E+++ + ++KK E E D AL GK RGK AMKK
Sbjct: 44 IKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKP--EKHELSDKALMGKE--VRGKRAMKK 99
Query: 537 IFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTE 716
I +EKL +T + E N++ G Y E+ + +EEV+
Sbjct: 100 IVDRVEKLHKTQNSNETRVDSLNVE---------NFGGY---LEILKENEEVRSK----- 142
Query: 717 FDIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRK 896
PWE+DE+ +VK+EK VTAAE LD LL RLRNEAA +R
Sbjct: 143 --------------GRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRT 188
Query: 897 WVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKD 1076
W+KVKKAGVTQ VVDQ+ WR NELA++KFDIPLC+NMDRA+EIVE KTGG+VV KD
Sbjct: 189 WIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKD 248
Query: 1077 FLAVYRGRIYESGSKHIRNIRRN 1145
FL VYRG ++ +K ++R N
Sbjct: 249 FLVVYRGCNHQLTTKGSPSLRTN 271
>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Glycine max]
Length = 750
Score = 198 bits (504), Expect = 4e-48
Identities = 135/323 (41%), Positives = 177/323 (54%), Gaps = 6/323 (1%)
Frame = +3
Query: 195 FLSSNPSKYN------FITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGST 356
FLS +PS + I+ S PP++N NG H+ S P
Sbjct: 3 FLSFHPSLFPNSYSRFHISSSLPPNSN--NG------------HNHQHTSPSQVP----- 43
Query: 357 IKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKK 536
IK+PT PWM PLL++P+E+++ + ++KK E E D AL GK RGK AMKK
Sbjct: 44 IKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKP--EKHELSDKALMGKE--VRGKRAMKK 99
Query: 537 IFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTE 716
I +EKL +T + E N++ G Y E+ + +EEV+
Sbjct: 100 IVDRVEKLHKTQNSNETRVDSLNVE---------NFGGY---LEILKENEEVRSK----- 142
Query: 717 FDIPLAXXXXXXXXXXXPWERDERMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRK 896
PWE+DE+ +VK+EK VTAAE LD LL RLRNEAA +R
Sbjct: 143 --------------GRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRT 188
Query: 897 WVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKD 1076
W+KVKKAGVTQ VVDQ+ WR NELA++KFDIPLC+NMDRA+EIVE KTGG+VV KD
Sbjct: 189 WIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKD 248
Query: 1077 FLAVYRGRIYESGSKHIRNIRRN 1145
FL VYRG ++ +K ++R N
Sbjct: 249 FLVVYRGCNHQLTTKGSPSLRTN 271
>ref|XP_006400150.1| hypothetical protein EUTSA_v10012836mg [Eutrema salsugineum]
gi|557101240|gb|ESQ41603.1| hypothetical protein
EUTSA_v10012836mg [Eutrema salsugineum]
Length = 698
Score = 197 bits (500), Expect = 1e-47
Identities = 128/326 (39%), Positives = 183/326 (56%), Gaps = 3/326 (0%)
Frame = +3
Query: 195 FLSSNPSKYNFITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPT- 371
FLS+ S PS N SN +KI + + + SE++ S + IK PT
Sbjct: 6 FLSARAFPSLITNSSLNPSRNPSNASKIPQ----------FDQFSENSRFSDAPIKVPTT 55
Query: 372 APWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDM-ALTGKVGGARGKVAMKKIFKG 548
APWM PLL++P+E+++ + R K+ G+N E AL + G RG AMKKI +
Sbjct: 56 APWMKGPLLIRPDEVLDTSYRHEKR--IRGQNAEEKTFKALNRRESGVRGSKAMKKIVRK 113
Query: 549 IEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIP 728
+EKL+E D EE +Q ++FK + E + +S ++
Sbjct: 114 VEKLEENSDSEE-TQMDNPVEFKSL------GRIAEETESGKRFSGKM------------ 154
Query: 729 LAXXXXXXXXXXXPWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVK 905
PW+R+E + ++RR KKE+ TAA+ ILD LL+RLR EA+ +RKWV
Sbjct: 155 -------------PWDREEEKFILRRTKKERAPTAADLILDEGLLKRLRREASKMRKWVN 201
Query: 906 VKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLA 1085
V+KAGVT+ VV+ + IWR NELA+++FD+PLC+NM+RAQEI+EMKTGG+VV K+FL
Sbjct: 202 VRKAGVTETVVNDIRSIWRLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLV 261
Query: 1086 VYRGRIYESGSKHIRNIRRNSVGDRE 1163
VYRG S K I +S+ +RE
Sbjct: 262 VYRGPPSYSSEKTNSEI-NSSLYERE 286
>ref|NP_197122.2| chloroplast splicing factor CRS1-like protein [Arabidopsis thaliana]
gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor gi|332004875|gb|AED92258.1|
chloroplast splicing factor CRS1-like protein
[Arabidopsis thaliana]
Length = 720
Score = 194 bits (492), Expect = 9e-47
Identities = 119/301 (39%), Positives = 164/301 (54%), Gaps = 2/301 (0%)
Frame = +3
Query: 201 SSNPSKYNFITF-SSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAP 377
S NP F +S + R+ + I S++ + + E+ S + IK PTAP
Sbjct: 28 SDNPKLQTFTQMLNSLFLSARAFPSLITNSSSRRAKSSQFDQFRENRGVSDAAIKVPTAP 87
Query: 378 WMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEK 557
WM PLL++P+EI++ KR + E AL + G RGK AMKKI + +EK
Sbjct: 88 WMKGPLLLRPDEILDTKKRNKPRKVE-----EKTFKALNRRESGVRGKKAMKKIVRNVEK 142
Query: 558 LQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAX 737
L E D EE D EY ++ +ES +
Sbjct: 143 LDEDSDSEETQM---------------------DDLSEFEYLGRIEEKVESKD------- 174
Query: 738 XXXXXXXXXXPWERDE-RMVIRRVKKEKVVTAAESILDGILLERLRNEAAMIRKWVKVKK 914
PWER+E R ++RR+KKE V T AE ILD LL RLR EA+ +RKWV V+K
Sbjct: 175 ----RFGGKMPWEREEERFILRRMKKESVPTTAELILDEGLLNRLRREASKMRKWVNVRK 230
Query: 915 AGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYR 1094
AGVT+ VV+++ +W+ NELA+++FD+PLC+NM+RAQEI+EMKTGG+VV K+FL VYR
Sbjct: 231 AGVTELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYR 290
Query: 1095 G 1097
G
Sbjct: 291 G 291