BLASTX nr result

ID: Rehmannia24_contig00026068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026068
         (380 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like i...    95   1e-17
ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266...    92   6e-17
dbj|BAB70512.1| Myb [Nicotiana tabacum]                                88   1e-15
ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263...    86   7e-15
emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]    85   9e-15
gb|EXC34096.1| Myb-related protein 3R-1 [Morus notabilis]              69   9e-10
ref|XP_002509747.1| myb, putative [Ricinus communis] gi|22354964...    64   2e-08
ref|XP_002304479.2| hypothetical protein POPTR_0003s12390g, part...    62   1e-07

>ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like isoform X1 [Solanum
           tuberosum] gi|565386118|ref|XP_006358884.1| PREDICTED:
           transcription factor MYB28-like isoform X2 [Solanum
           tuberosum]
          Length = 586

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 59/123 (47%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCSFDGKDANGSNFISE 199
           PES+L+NSAMSY  TPSIIR+KT R A  +  SS   + TP+          + SN    
Sbjct: 475 PESVLRNSAMSYTKTPSIIRKKTSRIAEASGHSSCTGSTTPMHFLESVPDREDSSNL--- 531

Query: 198 KGWLCSKDSTTG--TSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVM 25
                 KD  +G   SVSG++L RRLEY FD+EWDSS  R CTP S  P  GL   A  M
Sbjct: 532 ------KDRISGCKRSVSGKSLGRRLEYAFDMEWDSS--RSCTPVSAVPPCGLTLGANTM 583

Query: 24  LTP 16
           LTP
Sbjct: 584 LTP 586


>ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266438 [Solanum
           lycopersicum]
          Length = 586

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 58/123 (47%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCSFDGKDANGSNFISE 199
           PES+L+NSAMSY  TPSIIR+K  R A  +  SS   + TP+          + SN    
Sbjct: 475 PESVLRNSAMSYTKTPSIIRKKNSRIAEASGHSSCTGSTTPMHFLGSVPDREDSSNL--- 531

Query: 198 KGWLCSKDSTTG--TSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVM 25
                 KD  +G   SVSG++L RRLEY FD+EWDSS  R CTP S  P  GL   A  M
Sbjct: 532 ------KDRISGCKRSVSGKSLGRRLEYAFDVEWDSS--RSCTPVSAVPPCGLTLGANTM 583

Query: 24  LTP 16
           LTP
Sbjct: 584 LTP 586


>dbj|BAB70512.1| Myb [Nicotiana tabacum]
          Length = 588

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKT--FREAGNASFSSSVSNPTPIRSCSFDGKDANGSNFI 205
           PES+L+NSAMSY  TPSIIR+K   F EA   S  +  ++PT I   + D +D +     
Sbjct: 477 PESVLRNSAMSYTRTPSIIRKKNSRFPEAATHSRCTGTTSPTHIFPRASDREDTSN---- 532

Query: 204 SEKGWLCSKDSTTGTSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVM 25
                L  + S   +S SG++L RRLEY FD+EWD+S  RCCTP S      L+     M
Sbjct: 533 -----LKDRFSGCKSSASGKSLGRRLEYAFDMEWDAS--RCCTPVSAASPCALRLGGNTM 585

Query: 24  LTP 16
           LTP
Sbjct: 586 LTP 588


>ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263258 [Vitis vinifera]
          Length = 606

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCSFDGKDANGSN-FIS 202
           PES+L++SAMS+RNTPSIIR++T R++ N    S  S P     C+ +G+D N S  F +
Sbjct: 487 PESILRSSAMSFRNTPSIIRKRTSRKSSNN--FSDCSTPAQTVPCTQNGEDINSSKAFPN 544

Query: 201 EKGWLCSKDSTTGTSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVML 22
            K  L +        VS + L R LEY FD+EWD S  +C T  S+T +  + F A  +L
Sbjct: 545 AKQGLVASLCKPEAPVSVKTLGRCLEYAFDMEWDPSRVKCGTSVSSTATPDVNFSANRVL 604

Query: 21  TP 16
            P
Sbjct: 605 IP 606


>emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]
          Length = 579

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCSFDGKDANGSN-FIS 202
           PES+L++SAMS+RNTPSIIR++T R++ N    S  S P     C+ +G+D N S  F +
Sbjct: 460 PESILRSSAMSFRNTPSIIRKRTSRKSSNN--FSDCSTPAQTVPCTQNGEDINSSKAFPN 517

Query: 201 EKGWLCSKDSTTGTSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVML 22
            K    S        VS + L R LEY FD+EWD S  +C T  S+T +  + F A  +L
Sbjct: 518 AKQGFVSSLCKPEAPVSVKTLGRCLEYAFDMEWDPSRVKCGTSVSSTATPDVNFSANRVL 577

Query: 21  TP 16
            P
Sbjct: 578 IP 579


>gb|EXC34096.1| Myb-related protein 3R-1 [Morus notabilis]
          Length = 435

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCSFDGKDANGSNFISE 199
           PES+L+ SAM+Y+NTPSIIR++T R A  + FS   S  T   +     KD N ++  + 
Sbjct: 330 PESILRKSAMTYKNTPSIIRKRTPRSAVRSCFSDVSSTLTRKTTSHTREKDVNSTDLPNS 389

Query: 198 K-GWLCSKDSTTGTSVSGQALERRLEYEFDLEWDS 97
           K GW+   +S +G  ++ + LERRLEY F+ E DS
Sbjct: 390 KHGWI--SNSISGPLIAVKPLERRLEYAFNEEKDS 422


>ref|XP_002509747.1| myb, putative [Ricinus communis] gi|223549646|gb|EEF51134.1| myb,
           putative [Ricinus communis]
          Length = 497

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/97 (35%), Positives = 61/97 (62%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCSFDGKDANGSNFISE 199
           PES+L++SA +++NTPSIIR++ +R+ G  + S  +  P+   SCS + KD N ++    
Sbjct: 401 PESILRSSARTFKNTPSIIRKRAYRKTGVDNPSDVICTPSLKFSCS-NSKDVNTADIPEA 459

Query: 198 KGWLCSKDSTTGTSVSGQALERRLEYEFDLEWDSSTA 88
                S     G+S++ ++L R+L+Y FD E D++++
Sbjct: 460 NQGFLSLFCKAGSSIAVKSLRRQLDYAFDSEKDAASS 496


>ref|XP_002304479.2| hypothetical protein POPTR_0003s12390g, partial [Populus
           trichocarpa] gi|550343036|gb|EEE79458.2| hypothetical
           protein POPTR_0003s12390g, partial [Populus trichocarpa]
          Length = 419

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
 Frame = -3

Query: 378 PESMLKNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCSFDGKDANGSNFISE 199
           PES+L+NSA +++NTPSIIR++  R A  A  S     P+   SC  D +  + +N  +E
Sbjct: 304 PESILRNSARTFKNTPSIIRKRALRGAAIAKISDVTCTPSSKFSCPDDFQIVDSTNSPNE 363

Query: 198 K-GWLCSKDSTTGTSVSGQALERRLEYEFDLEWDSSTARC 82
           K G+L  +     TS + ++L+R  +Y FD+E ++   +C
Sbjct: 364 KQGFL--RYFQPETSFAIKSLKRHFDYAFDMEKEADLGKC 401


Top