BLASTX nr result

ID: Rehmannia24_contig00025996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025996
         (449 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32713.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_002275477.2| PREDICTED: zinc finger protein NUTCRACKER-li...    56   6e-06
ref|XP_004246670.1| PREDICTED: zinc finger protein JACKDAW-like ...    55   1e-05

>emb|CBI32713.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/60 (55%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = -2

Query: 172 QMMSGDVFSVXXXXXXXXXXXXXXXXXXXXXK---RNLPGTPDPDAEVIALSPKTLMATN 2
           QMMSGD+FS+                         RNLPGTPDPDAEVIALSPKTLMATN
Sbjct: 2   QMMSGDMFSIPSSIRTFAQDPDANPNNLKPPPKKKRNLPGTPDPDAEVIALSPKTLMATN 61


>ref|XP_002275477.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 490

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/59 (54%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
 Frame = -2

Query: 169 MMSGDVFSVXXXXXXXXXXXXXXXXXXXXXK---RNLPGTPDPDAEVIALSPKTLMATN 2
           MMSGD+FS+                         RNLPGTPDPDAEVIALSPKTLMATN
Sbjct: 1   MMSGDMFSIPSSIRTFAQDPDANPNNLKPPPKKKRNLPGTPDPDAEVIALSPKTLMATN 59


>ref|XP_004246670.1| PREDICTED: zinc finger protein JACKDAW-like [Solanum lycopersicum]
          Length = 459

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/59 (52%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
 Frame = -2

Query: 169 MMSGDVFSVXXXXXXXXXXXXXXXXXXXXXK---RNLPGTPDPDAEVIALSPKTLMATN 2
           MMSGD+FS+                         RNLPGTPDPDAEVIA+SPKTLMATN
Sbjct: 1   MMSGDLFSIHQQQHQQVLVEQNPNPKANSSSKKRRNLPGTPDPDAEVIAISPKTLMATN 59


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