BLASTX nr result
ID: Rehmannia24_contig00025988
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00025988
(614 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 69 1e-09
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 69 1e-09
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 63 8e-09
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 62 1e-07
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 61 2e-07
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 61 2e-07
gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus pe... 61 3e-07
ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629... 58 2e-06
gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japo... 58 2e-06
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 58 2e-06
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 58 2e-06
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 57 3e-06
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 57 4e-06
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze... 57 4e-06
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ... 57 5e-06
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 57 5e-06
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 56 7e-06
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 56 7e-06
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 56 7e-06
gb|AAD14492.1| Hypothetical protein [Arabidopsis thaliana] 56 9e-06
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 68.6 bits (166), Expect = 1e-09
Identities = 40/119 (33%), Positives = 54/119 (45%)
Frame = -3
Query: 588 EKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXX 409
E+D++ WHF KKGE+SVKS Y L L N NF
Sbjct: 1091 EEDEVLWHFDKKGEYSVKSGYQLAL-----NQNFPNEPESSNSSSRLWKIPWMLDLPEKV 1145
Query: 408 KHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPIL 232
K F+W ILPT NL + + C C +ET+ H+ EC A+ +W LAP++
Sbjct: 1146 KIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLI 1204
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 68.6 bits (166), Expect = 1e-09
Identities = 40/119 (33%), Positives = 54/119 (45%)
Frame = -3
Query: 588 EKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXX 409
E+D++ WHF KKGE+SVKS Y L L N NF
Sbjct: 404 EEDEVLWHFDKKGEYSVKSGYQLAL-----NQNFPNEPESSNSSSRLWKIPWMLDLPEKV 458
Query: 408 KHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPIL 232
K F+W ILPT NL + + C C +ET+ H+ EC A+ +W LAP++
Sbjct: 459 KIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLI 517
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 62.8 bits (151), Expect(2) = 8e-09
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = -3
Query: 588 EKDKLWWHFHKKGEFSVKSVYTLL--LKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXX 415
+ D W F K G ++VKS Y L C+L F
Sbjct: 879 KSDDFSWSFTKSGNYTVKSGYWAARDLSRPTCDLPF-----QGPSVSALQAQVWKIKTTR 933
Query: 414 XXKHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPI 235
KHF W+C G L TN L + I + CP CG E+I HL F C ++ +W L+PI
Sbjct: 934 KFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPI 993
Score = 23.1 bits (48), Expect(2) = 8e-09
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -2
Query: 157 FGV*NEINHLFALV---VVKTRNLWVFQKERKTKRWIIDGAVAEWAEFRDISSK 5
F + +I +F + + K+RN ++F+ ++ + I+D A+ E ++ +SK
Sbjct: 1019 FDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQANSK 1072
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 62.0 bits (149), Expect = 1e-07
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = -3
Query: 609 IKGLQLGE---KDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXX 439
I L +G +D L WHF K G ++VKS Y +LN
Sbjct: 773 ISALPIGNPNMEDTLGWHFTKAGNYTVKSGY----HTARLDLN-EGTTLIGPDLTTLKAY 827
Query: 438 XXXXXXXXXXKHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAK 259
+HF+W+ G +P + NLR +GI D C CG E+I H F+C A+
Sbjct: 828 IWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPAR 887
Query: 258 LVWKLAPI 235
+W L+ I
Sbjct: 888 QIWALSQI 895
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 61.2 bits (147), Expect = 2e-07
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Frame = -3
Query: 600 LQLGEKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXX 421
+ G +D + WH + G FSV+S Y K + +
Sbjct: 810 ISAGREDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKERLPDGASSSSRPVWDNLWKLEIP 869
Query: 420 XXXXKHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK-- 247
F W G++P L K I + CPVC G+E I+H+ F C RAKL+WK
Sbjct: 870 PKIKI-FAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQL 928
Query: 246 -----LAPILG 229
+ PILG
Sbjct: 929 GIWSRIQPILG 939
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 61.2 bits (147), Expect = 2e-07
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Frame = -3
Query: 600 LQLGEKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXX 421
+ G +D + WH + G FSV+S Y K + +
Sbjct: 810 ISAGREDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKERLPDGASSSSRPVWDNLWKLEIP 869
Query: 420 XXXXKHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK-- 247
F W G++P L K I + CPVC G+E I+H+ F C RAKL+WK
Sbjct: 870 PKIKI-FAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQL 928
Query: 246 -----LAPILG 229
+ PILG
Sbjct: 929 GIWSRIQPILG 939
>gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
Length = 378
Score = 60.8 bits (146), Expect = 3e-07
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -3
Query: 570 WHFHKKGEFSVKSVYTLLLK---NKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXKHF 400
WHF K G ++VKS Y L +K N V + F
Sbjct: 165 WHFTKYGGYTVKSGYDLAIKLRRNGVIGKKGKGECSNQSGQSGPWKHIWALQVPPKIQMF 224
Query: 399 IWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAP 238
IW C+ +L NLR + ++++ C +CG+ +T HLFF C A+L W +P
Sbjct: 225 IWRCYRNVLAVRENLRRRRVDVEADCLLCGNNGKTEVHLFFRCEIARLFWFASP 278
>ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629438 [Citrus sinensis]
Length = 715
Score = 58.2 bits (139), Expect = 2e-06
Identities = 33/115 (28%), Positives = 51/115 (44%)
Frame = -3
Query: 585 KDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXK 406
+D+L WHF K G+++VKS Y L N+ F +
Sbjct: 379 EDELIWHFGKSGQYTVKSGYQTAL-----NIRFPAMPSSSEFSKNEWNIIWSLALPKKIR 433
Query: 405 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLA 241
F+W +LP++ NL + I + C +C GIE + H +C AK VW+L+
Sbjct: 434 IFVWRAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLS 488
>gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japonica Group]
Length = 446
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 7/126 (5%)
Frame = -3
Query: 585 KDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXK 406
+D + WH + G FSV+S Y K + +
Sbjct: 204 EDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKERLPDSASSSSRPVWDNMWKLESPPKIKI 263
Query: 405 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK------- 247
F W G++P L K I + CPVC G+E I+H+ F C RAKL+WK
Sbjct: 264 -FAWRMLHGVIPCKGILADKHIAVQGGCPVCPSGVEDIKHMVFTCKRAKLIWKQLGIWSR 322
Query: 246 LAPILG 229
+ PILG
Sbjct: 323 IQPILG 328
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = -3
Query: 405 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPILG 229
HFIW C G L T + LR + I D C C + ETI H+ F CS A++VW+ A G
Sbjct: 1399 HFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSG 1457
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = -3
Query: 582 DKLW-WHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXK 406
D W W K GE+SVKS Y L ++ L+ + K
Sbjct: 775 DDFWVWLHAKTGEYSVKSGYWLAFQSN--KLDLIQQANLLPSTNGLKEQVWSTKSSPKIK 832
Query: 405 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPI 235
F+W LP + +G++ID C +CGD E+ H+ F CS A+ VW L+ +
Sbjct: 833 MFLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV 889
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 57.4 bits (137), Expect = 3e-06
Identities = 34/121 (28%), Positives = 53/121 (43%)
Frame = -3
Query: 585 KDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXK 406
+D++ WH+ K+G++++KS Y + LK K K
Sbjct: 166 EDEVIWHYDKRGKYTMKSGYQVALKLKFP----YSPNCSNSSSSSNWSVIWKLTLPAKIK 221
Query: 405 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPILGR 226
FIW +LPT NL + I + YC CG+ +E H C AK VW+L+P+
Sbjct: 222 IFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCKAAKKVWQLSPMASS 281
Query: 225 Y 223
+
Sbjct: 282 F 282
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 57.0 bits (136), Expect = 4e-06
Identities = 34/116 (29%), Positives = 49/116 (42%)
Frame = -3
Query: 594 LGEKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXX 415
LG +D + WH+++ G FSV+S Y NK +
Sbjct: 861 LGREDVVAWHYNRSGRFSVRSAYHCQWDNKYGQRHHQVQASFASGNQLWKKLWRMKVPGK 920
Query: 414 XXKHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK 247
F W G++P + L + I CPVC +G E I+HL F C RA+ VW+
Sbjct: 921 IKI-FGWRALKGLVPCRAILANRHIGQLGGCPVCQNGAEDIKHLLFTCDRAREVWQ 975
>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
Length = 472
Score = 57.0 bits (136), Expect = 4e-06
Identities = 35/118 (29%), Positives = 48/118 (40%)
Frame = -3
Query: 600 LQLGEKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXX 421
+Q G +D L WH KG FSVKS Y L + + + N
Sbjct: 100 IQEGMEDTLAWHGDPKGNFSVKSAYALASRRRDHHNNADASSSISGRGENVWKSIWNVNV 159
Query: 420 XXXXKHFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK 247
K F+W P N+ +GI I+ CP+C E HLF +C + K VW+
Sbjct: 160 TNKIKMFLWRLAHNSHPVRVNIARRGIKIETLCPMCFRLDEDGGHLFLKCKKVKQVWR 217
>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
reverse transcriptase [Arabidopsis thaliana]
gi|332641254|gb|AEE74775.1| RNase H domain-containing
protein [Arabidopsis thaliana]
Length = 484
Score = 56.6 bits (135), Expect = 5e-06
Identities = 31/114 (27%), Positives = 48/114 (42%)
Frame = -3
Query: 582 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXKH 403
DK+ W+++ GE++V+S Y LL + N+ + H
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLK---H 173
Query: 402 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLA 241
F+W L T L +G+ ID CP C E+I H F C A + W+L+
Sbjct: 174 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLS 227
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 56.6 bits (135), Expect = 5e-06
Identities = 31/114 (27%), Positives = 48/114 (42%)
Frame = -3
Query: 582 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXKH 403
DK+ W+++ GE++V+S Y LL + N+ + H
Sbjct: 1383 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLK---H 1439
Query: 402 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLA 241
F+W L T L +G+ ID CP C E+I H F C A + W+L+
Sbjct: 1440 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLS 1493
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 56.2 bits (134), Expect = 7e-06
Identities = 35/113 (30%), Positives = 49/113 (43%)
Frame = -3
Query: 582 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXKH 403
D++ WH+ KKG +SVKS Y L L+ K F K
Sbjct: 410 DQVLWHYDKKGNYSVKSGYQLALQMK-----FPNRPSSSKEDNNSWNSIWYLQIPEKVKI 464
Query: 402 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKL 244
F+W +LPT+ NL + I +C C ETI H F+C ++ +WKL
Sbjct: 465 FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 517
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 56.2 bits (134), Expect = 7e-06
Identities = 35/113 (30%), Positives = 49/113 (43%)
Frame = -3
Query: 582 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXKH 403
D++ WH+ KKG +SVKS Y L L+ K F K
Sbjct: 613 DQVLWHYDKKGNYSVKSGYQLALQMK-----FPNRPSSSKEDNNSWNSIWYLQIPEKVKI 667
Query: 402 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKL 244
F+W +LPT+ NL + I +C C ETI H F+C ++ +WKL
Sbjct: 668 FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 720
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 56.2 bits (134), Expect = 7e-06
Identities = 35/113 (30%), Positives = 49/113 (43%)
Frame = -3
Query: 582 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVXXXXXXXXXXXXXXXXXXXXXXXXXKH 403
D++ WH+ KKG +SVKS Y L L+ K F K
Sbjct: 410 DQVLWHYDKKGNYSVKSGYQLALQMK-----FPNRPSSSKEDNNSWNSIWYLQIPEKVKI 464
Query: 402 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKL 244
F+W +LPT+ NL + I +C C ETI H F+C ++ +WKL
Sbjct: 465 FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 517
>gb|AAD14492.1| Hypothetical protein [Arabidopsis thaliana]
Length = 240
Score = 55.8 bits (133), Expect = 9e-06
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = -3
Query: 405 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPI 235
HF+W+ G +P NLR +GIN + C CG ETI H F C A+ +W L+ I
Sbjct: 29 HFLWQILAGCVPITDNLRKRGINCEIGCSRCGALEETINHTLFLCHPARQIWALSQI 85