BLASTX nr result
ID: Rehmannia24_contig00025935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00025935
(330 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006576518.1| replication protein 1a [Amazon lily mild mot... 204 8e-51
gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform v... 188 6e-46
gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus] 158 8e-37
ref|NP_619770.1| replicase [Pelargonium zonate spot virus] gi|82... 146 2e-33
ref|NP_659000.1| 1a protein [Broad bean mottle virus] gi|401312|... 128 9e-28
gb|ADW09019.1| replication protein 1a [Brome mosaic virus] 122 4e-26
ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03... 122 5e-26
emb|CAA41361.1| 1a protein [Brome mosaic virus] 122 5e-26
dbj|BAJ41520.1| 1a protein [Brome mosaic virus] 122 5e-26
gb|ABF83485.1| 1a [Brome mosaic virus] 122 5e-26
ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus] g... 122 6e-26
emb|CAI62001.2| polyprotein [Cucumber mosaic virus] gi|60649862|... 120 2e-25
emb|CAI62000.2| polyprotein [Cucumber mosaic virus] 120 2e-25
gb|ACE07023.1| 1a protein [Cucumber mosaic virus] 119 3e-25
gb|AHJ58882.1| protein 1a [Cucumber mosaic virus] 119 4e-25
gb|AHJ58881.1| protein 1a [Cucumber mosaic virus] 119 4e-25
gb|AHJ58880.1| protein 1a [Cucumber mosaic virus] 119 4e-25
gb|AGN56154.1| 1a protein [Cucumber mosaic virus] 119 4e-25
gb|AGN56153.1| 1a protein [Cucumber mosaic virus] 119 4e-25
gb|AGN56145.1| 1a protein [Cucumber mosaic virus] 119 4e-25
>ref|YP_006576518.1| replication protein 1a [Amazon lily mild mottle virus]
gi|398650492|dbj|BAM34543.1| replication protein 1a
[Amazon lily mild mottle virus]
Length = 945
Score = 204 bits (520), Expect = 8e-51
Identities = 96/108 (88%), Positives = 102/108 (94%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGE 150
+ +VFIRQQLSV EGEKIRKRFGGAYEL+LTQEFTAPHSFAAALR CETLECLDFFP+GE
Sbjct: 43 SNKVFIRQQLSVAEGEKIRKRFGGAYELQLTQEFTAPHSFAAALRTCETLECLDFFPDGE 102
Query: 149 ILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMVRRSS 6
ILDFGGSWLFHWKRG VHSCCPILDARDAAR QERLVHMEK+VR+SS
Sbjct: 103 ILDFGGSWLFHWKRGKPVHSCCPILDARDAARQQERLVHMEKLVRKSS 150
>gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform virus]
Length = 943
Score = 188 bits (478), Expect = 6e-46
Identities = 82/109 (75%), Positives = 99/109 (90%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGE 150
+++V++RQ L+VQEGEKIRKRFGGA++L LTQEF APHSFAAALR CETLECLDFFP+G+
Sbjct: 43 SQKVYVRQMLTVQEGEKIRKRFGGAFDLALTQEFVAPHSFAAALRTCETLECLDFFPQGQ 102
Query: 149 ILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMVRRSSS 3
+LDFGGSWLFHW+RG QVHSCCP+LD RDA RHQER+VHM+K+V + S
Sbjct: 103 VLDFGGSWLFHWQRGHQVHSCCPVLDIRDACRHQERIVHMQKLVLKRPS 151
>gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus]
Length = 962
Score = 158 bits (399), Expect = 8e-37
Identities = 71/105 (67%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGE 150
+K+V++RQ LS +GEK++KRFGG ++L+L+QEF APHSFA A+RQCETLECL FPE
Sbjct: 44 SKKVWVRQILSASDGEKMQKRFGGTFDLQLSQEFIAPHSFAGAMRQCETLECLSSFPEDS 103
Query: 149 -ILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
ILDFGGSWLFHW+R VHSCCP+LDARD ARHQER++ M+K V
Sbjct: 104 LILDFGGSWLFHWQRQHNVHSCCPVLDARDMARHQERMISMQKCV 148
>ref|NP_619770.1| replicase [Pelargonium zonate spot virus]
gi|82004832|sp|Q9DUT3.1|1A_PZSVT RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|10185102|emb|CAC08526.1|
unnamed protein product [Pelargonium zonate spot virus]
Length = 962
Score = 146 bits (369), Expect = 2e-33
Identities = 67/105 (63%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGE 150
+K+V++RQ LS +GEK++KRFGG ++L+L++ PHSFA A+RQCETLECL FPE
Sbjct: 44 SKKVWVRQILSASDGEKMQKRFGGTFDLQLSKNL-CPHSFAGAMRQCETLECLSSFPEDS 102
Query: 149 -ILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
ILDFGGSWLFHW+R VHSCCP+LDARD ARHQER++ M+K V
Sbjct: 103 LILDFGGSWLFHWQRQHNVHSCCPVLDARDMARHQERMISMQKCV 147
>ref|NP_659000.1| 1a protein [Broad bean mottle virus]
gi|401312|sp|Q00020.1|ORF1A_BBMV RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|210663|gb|AAA42740.1| 1a
protein [Broad bean mottle virus]
Length = 966
Score = 128 bits (321), Expect = 9e-28
Identities = 62/109 (56%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFF-PEG 153
+K+V IR +LSV E + R R+GGA+++ LT E+TAPHS A ALR E +C+D F PE
Sbjct: 43 SKKVNIRNKLSVAECDAFRARYGGAFDVNLTHEYTAPHSLAGALRVAEHYDCIDSFPPED 102
Query: 152 EILDFGGSWLFHWKRG-SQVHSCCPILDARDAARHQERLVHMEKMVRRS 9
+I+DFGGSWL H+ RG S+VHSCCPIL RDA RH+ER+ + KMV+ S
Sbjct: 103 KIIDFGGSWLHHYSRGDSRVHSCCPILGPRDATRHEERMCRLRKMVQTS 151
>gb|ADW09019.1| replication protein 1a [Brome mosaic virus]
Length = 961
Score = 122 bits (307), Expect = 4e-26
Identities = 55/109 (50%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFF-PEG 153
+K++ +R +LS++E + R R+GGA++L LTQ++ APHS A ALR E +CLD F PE
Sbjct: 43 SKKINVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHFDCLDSFPPED 102
Query: 152 EILDFGGSWLFHW-KRGSQVHSCCPILDARDAARHQERLVHMEKMVRRS 9
++DFGGSW H+ +R +VHSCCP+L RDAARH+ER+ M K+++ S
Sbjct: 103 PVIDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQES 151
>ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03588.1|ORF1A_BMV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|58729|emb|CAA26228.1| unnamed
protein product [Brome mosaic virus]
Length = 961
Score = 122 bits (306), Expect = 5e-26
Identities = 55/109 (50%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFF-PEG 153
+K++ +R +LS++E + R R+GGA++L LTQ++ APHS A ALR E +CLD F PE
Sbjct: 43 SKKINVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHYDCLDSFPPED 102
Query: 152 EILDFGGSWLFHW-KRGSQVHSCCPILDARDAARHQERLVHMEKMVRRS 9
++DFGGSW H+ +R +VHSCCP+L RDAARH+ER+ M K+++ S
Sbjct: 103 PVIDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQES 151
>emb|CAA41361.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 122 bits (306), Expect = 5e-26
Identities = 55/109 (50%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFF-PEG 153
+K++ +R +LS++E + R R+GGA++L LTQ++ APHS A ALR E +CLD F PE
Sbjct: 43 SKKINVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHYDCLDSFPPED 102
Query: 152 EILDFGGSWLFHW-KRGSQVHSCCPILDARDAARHQERLVHMEKMVRRS 9
++DFGGSW H+ +R +VHSCCP+L RDAARH+ER+ M K+++ S
Sbjct: 103 PVIDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQES 151
>dbj|BAJ41520.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 122 bits (306), Expect = 5e-26
Identities = 55/109 (50%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFF-PEG 153
+K++ +R +LS++E + R R+GGA++L LTQ++ APHS A ALR E +CLD F PE
Sbjct: 43 SKKINVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHYDCLDSFPPED 102
Query: 152 EILDFGGSWLFHW-KRGSQVHSCCPILDARDAARHQERLVHMEKMVRRS 9
++DFGGSW H+ +R +VHSCCP+L RDAARH+ER+ M K+++ S
Sbjct: 103 PVIDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQES 151
>gb|ABF83485.1| 1a [Brome mosaic virus]
Length = 961
Score = 122 bits (306), Expect = 5e-26
Identities = 55/109 (50%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFF-PEG 153
+K++ +R +LS++E + R R+GGA++L LTQ++ APHS A ALR E +CLD F PE
Sbjct: 43 SKKINVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHYDCLDSFPPED 102
Query: 152 EILDFGGSWLFHW-KRGSQVHSCCPILDARDAARHQERLVHMEKMVRRS 9
++DFGGSW H+ +R +VHSCCP+L RDAARH+ER+ M K+++ S
Sbjct: 103 PVIDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQES 151
>ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus]
gi|259651322|dbj|BAI40161.1| 1a protein [Melandrium
yellow fleck virus]
Length = 948
Score = 122 bits (305), Expect = 6e-26
Identities = 59/106 (55%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Frame = -2
Query: 329 AKQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-EG 153
+K++ +R +LS QE + R R+GGAYELKLTQE+ APHS A ALR E +CL FP E
Sbjct: 39 SKRITVRNKLSPQEADAFRARYGGAYELKLTQEYEAPHSLAGALRIAEHYDCLGQFPLED 98
Query: 152 EILDFGGSWLFHWKRGS-QVHSCCPILDARDAARHQERLVHMEKMV 18
++DFGGSW H+ R +VHSCCPIL RDA RH+ERL M K++
Sbjct: 99 PVIDFGGSWWHHYSREDYRVHSCCPILGVRDATRHEERLCRMRKLL 144
>emb|CAI62001.2| polyprotein [Cucumber mosaic virus] gi|60649862|emb|CAI62002.2|
polyprotein [Cucumber mosaic virus]
gi|60649864|emb|CAI62003.2| polyprotein [Cucumber mosaic
virus] gi|60649866|emb|CAI62004.2| polyprotein [Cucumber
mosaic virus] gi|60649868|emb|CAI62005.2| polyprotein
[Cucumber mosaic virus]
Length = 245
Score = 120 bits (300), Expect = 2e-25
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 19 RKVYIRNVLSVKDSEIIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 78
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERLV+M K++
Sbjct: 79 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLVNMRKII 126
>emb|CAI62000.2| polyprotein [Cucumber mosaic virus]
Length = 245
Score = 120 bits (300), Expect = 2e-25
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 19 RKVYIRNVLSVKDSEIIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 78
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERLV+M K++
Sbjct: 79 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLVNMRKII 126
>gb|ACE07023.1| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 119 bits (299), Expect = 3e-25
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Frame = -2
Query: 323 QVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP----- 159
+V+IR L+V++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLDFFP
Sbjct: 46 KVYIRNVLNVKDSEIIRNRYGGKYDLHLTQQELAPHGLAGALRLCETLDCLDFFPRSGLR 105
Query: 158 EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERL+ M K++
Sbjct: 106 QDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMSMRKII 152
>gb|AHJ58882.1| protein 1a [Cucumber mosaic virus]
Length = 993
Score = 119 bits (298), Expect = 4e-25
Identities = 57/108 (52%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 45 RKVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 104
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERL++M K++
Sbjct: 105 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKII 152
>gb|AHJ58881.1| protein 1a [Cucumber mosaic virus]
Length = 993
Score = 119 bits (298), Expect = 4e-25
Identities = 57/108 (52%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 45 RKVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 104
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERL++M K++
Sbjct: 105 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKII 152
>gb|AHJ58880.1| protein 1a [Cucumber mosaic virus]
Length = 993
Score = 119 bits (298), Expect = 4e-25
Identities = 57/108 (52%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 45 RKVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 104
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERL++M K++
Sbjct: 105 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKII 152
>gb|AGN56154.1| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 119 bits (298), Expect = 4e-25
Identities = 57/108 (52%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 45 RKVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 104
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERL++M K++
Sbjct: 105 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKII 152
>gb|AGN56153.1| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 119 bits (298), Expect = 4e-25
Identities = 57/108 (52%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 45 RKVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 104
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERL++M K++
Sbjct: 105 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKII 152
>gb|AGN56145.1| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 119 bits (298), Expect = 4e-25
Identities = 57/108 (52%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -2
Query: 326 KQVFIRQQLSVQEGEKIRKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP---- 159
++V+IR LSV++ E IR R+GG Y+L LTQ+ APH A ALR CETL+CLD FP
Sbjct: 45 RKVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL 104
Query: 158 -EGEILDFGGSWLFHWKRGSQVHSCCPILDARDAARHQERLVHMEKMV 18
+ +LDFGGSW+ H+ RG VH C P L RD RH ERL++M K++
Sbjct: 105 RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKII 152