BLASTX nr result

ID: Rehmannia24_contig00025829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025829
         (373 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY33060.1| Auxin response factor 4 isoform 1 [Theobroma cacao]     65   9e-09
gb|EOY33062.1| Auxin response factor 4 isoform 3 [Theobroma cacao]     60   3e-07
gb|EMJ06142.1| hypothetical protein PRUPE_ppa001557mg [Prunus pe...    58   1e-06
ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vit...    55   7e-06

>gb|EOY33060.1| Auxin response factor 4 isoform 1 [Theobroma cacao]
          Length = 800

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   ARQGPLMQSNISSFPTGNRVLTPTSVLSRATSDISRVLNPGNESMALEKTSTTA-SMHLK 177
           A Q P M S  S+F  GN    P+S+ +    D  R  NP NE   LE  ++ A   +L+
Sbjct: 577 AGQDPTMSSYTSTFLRGNVSFNPSSIKTGVIVDSVRKPNPLNEHKPLENIASPAFRKNLR 636

Query: 178 NMNGENNLEKVPICKLFGYSLSEDPNILNSQGHSKRICTKVNSKWLLYGELIMLYIIN 351
           N   +     V  CKLFG+SL+ +    NSQ   KR CTKV+ +  L G  I L  +N
Sbjct: 637 NQQDDCFKGNVAGCKLFGFSLTAESPTPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLN 694


>gb|EOY33062.1| Auxin response factor 4 isoform 3 [Theobroma cacao]
          Length = 698

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   ARQGPLMQSNISSFPTGNRVLTPTSVLSRATSDISRVLNPGNESMALEKTSTTA-SMHLK 177
           A Q P M S  S+F  GN    P+S+ +    D  R  NP NE   LE  ++ A   +L+
Sbjct: 577 AGQDPTMSSYTSTFLRGNVSFNPSSIKTGVIVDSVRKPNPLNEHKPLENIASPAFRKNLR 636

Query: 178 NMNGENNLEKVPICKLFGYSLSEDPNILNSQGHSKRICTKVN 303
           N   +     V  CKLFG+SL+ +    NSQ   KR CTKV+
Sbjct: 637 NQQDDCFKGNVAGCKLFGFSLTAESPTPNSQNSGKRSCTKVS 678


>gb|EMJ06142.1| hypothetical protein PRUPE_ppa001557mg [Prunus persica]
          Length = 803

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1   ARQGPLMQSNISSFPTGNRVLTPTSV-LSRATSDISRVLNPGNESMALEKTST--TASMH 171
           A Q P+M SN ++ P  N  + P S+ +  A +++ R   P +E    E +S   T   +
Sbjct: 579 AGQDPVMCSNATNLPRENMKINPYSMQMGVARNEVGRPNKP-SEHKPQESSSAPPTLVQN 637

Query: 172 LKNMNGENNLEKVPICKLFGYSLSEDPNILNSQGHSKRICTKVNSKWLLYGELIMLYIIN 351
            +N N E+    V  CKLFG+SL+ +    NSQ  SKR CTKV+ +  L G  I L  +N
Sbjct: 638 PRNPNDEDFNGTVTGCKLFGFSLTGENPTPNSQSSSKRSCTKVHKQGSLVGRAIDLSKLN 697


>ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
           gi|297746231|emb|CBI16287.3| unnamed protein product
           [Vitis vinifera]
          Length = 798

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
 Frame = +1

Query: 7   QGPLMQSNISSFPTGNRVLTPTSVLSRATSDISRVLNPGNESMALEKTSTTASM--HLKN 180
           Q P+M S  S+FP  N    P+S+ S       R LN  NE    E  S   ++  +LK+
Sbjct: 577 QDPVMLSYASNFPRENVPFNPSSIRSGVIGTEVRKLNIPNEPKPPENISAPPNLETNLKH 636

Query: 181 MNGENNLEKVPICKLFGYSLS-EDPNILNSQGHSKRICTKVNSKWLLYGELIMLYIIN 351
              +        CKLFG+SL+ E P   NSQ   KR CTKV+ +  L G  I L  +N
Sbjct: 637 QKDDTFSGTAAGCKLFGFSLTGETPP--NSQNSGKRSCTKVHKQGNLVGRAIDLSRLN 692


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