BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025662
         (546 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        208   6e-52
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         207   1e-51
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           207   1e-51
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   207   2e-51
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   206   2e-51
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   206   2e-51
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   206   3e-51
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...   206   3e-51
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   205   5e-51
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     205   5e-51
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               203   2e-50
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                203   2e-50
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   203   3e-50
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   202   4e-50
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     202   6e-50
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     201   1e-49
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   201   1e-49
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   198   8e-49
gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospe...   197   1e-48
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   195   5e-48

>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  208 bits (530), Expect = 6e-52
 Identities = 101/182 (55%), Positives = 127/182 (69%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGTAA-VADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ QG T++G  A V+DS +   S+A  LWHMRLGH  E 
Sbjct: 389 LKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSN--SDATNLWHMRLGHMSEI 446

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 447 GLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 506

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 507 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEF 566

Query: 535 TS 540
            S
Sbjct: 567 CS 568


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  207 bits (527), Expect = 1e-51
 Identities = 101/182 (55%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 221 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 278

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 279 GLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 338

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 339 SFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEF 398

Query: 535 TS 540
            S
Sbjct: 399 CS 400


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  207 bits (527), Expect = 1e-51
 Identities = 101/182 (55%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 221 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 278

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 279 GLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 338

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 339 SFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEF 398

Query: 535 TS 540
            S
Sbjct: 399 CS 400


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  207 bits (526), Expect = 2e-51
 Identities = 101/182 (55%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 355 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 412

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 413 GLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 472

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 473 SFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEF 532

Query: 535 TS 540
            S
Sbjct: 533 CS 534


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  206 bits (525), Expect = 2e-51
 Identities = 101/182 (55%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1    LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
            LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 596  LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMTEI 653

Query: 175  SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
             L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 654  GLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 713

Query: 355  SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
            S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 714  SFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEF 773

Query: 535  TS 540
             S
Sbjct: 774  CS 775


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  206 bits (525), Expect = 2e-51
 Identities = 101/182 (55%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 389 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMTEI 446

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 447 GLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 506

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 507 SFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEF 566

Query: 535 TS 540
            S
Sbjct: 567 CS 568


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  206 bits (524), Expect = 3e-51
 Identities = 100/182 (54%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 350 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 407

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 408 GLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 467

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG ++
Sbjct: 468 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDF 527

Query: 535 TS 540
            S
Sbjct: 528 CS 529


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score =  206 bits (524), Expect = 3e-51
 Identities = 100/182 (54%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 404 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 461

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 462 GLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 521

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG ++
Sbjct: 522 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDF 581

Query: 535 TS 540
            S
Sbjct: 582 CS 583


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  205 bits (522), Expect = 5e-51
 Identities = 92/121 (76%), Positives = 108/121 (89%)
 Frame = +1

Query: 1   LKATSGSLVVMKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSL 180
           LKATSG+LV++KG+ +NNLYYYQG+TV+GT A A S ++K++EA KLWHMRLGHAGEKSL
Sbjct: 314 LKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSL 373

Query: 181 QTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTPSL 360
           Q   KQGLLK  K CKL+FCEHCVLGKQ+RVKFGT IHNT+GILDYVHSDVWGP+KTPS+
Sbjct: 374 QIFTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSI 433

Query: 361 G 363
           G
Sbjct: 434 G 434



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +1

Query: 418 YTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYTSDP 546
           +TMK K++VL IFLKWK  +ENQTGRKIKVLRTDNGGEY SDP
Sbjct: 506 FTMKNKNDVLEIFLKWKDEVENQTGRKIKVLRTDNGGEYKSDP 548


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  205 bits (522), Expect = 5e-51
 Identities = 101/182 (55%), Positives = 127/182 (69%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 298 LKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 355

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 356 GLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 415

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E 
Sbjct: 416 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEL 475

Query: 535 TS 540
            S
Sbjct: 476 CS 477


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  203 bits (517), Expect = 2e-50
 Identities = 99/182 (54%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGTAA-VADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ QG T++G  A V+DS +   S+A  LWHMRLGH  E 
Sbjct: 206 LKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSN--SDATNLWHMRLGHMSEI 263

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+ +GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 264 GLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 323

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T ++D+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 324 SFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEF 383

Query: 535 TS 540
            S
Sbjct: 384 CS 385


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  203 bits (517), Expect = 2e-50
 Identities = 99/182 (54%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGTAA-VADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ QG T++G  A V+DS +   S+A  LWHMRLGH  E 
Sbjct: 374 LKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSN--SDATNLWHMRLGHMSEI 431

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+ +GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 432 GLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 491

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T ++D+SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 492 SFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEF 551

Query: 535 TS 540
            S
Sbjct: 552 CS 553


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  203 bits (516), Expect = 3e-50
 Identities = 96/178 (53%), Positives = 124/178 (69%)
 Frame = +1

Query: 1    LKATSGSLVVMKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSL 180
            L+ + G+LVVMKG  ++ +Y   G++V+GTAAV      +E    +LWH RLGH  EK L
Sbjct: 707  LRVSKGALVVMKGRLQHGIYTLMGSSVLGTAAV------EEDNCTELWHRRLGHMSEKGL 760

Query: 181  QTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTPSL 360
              L+KQGLL   +  KL FCE CV+GKQ+RVKF    H T G+L+Y+HSD+WGPS   S 
Sbjct: 761  SILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIHSDLWGPSPVESH 820

Query: 361  GGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
             G  Y+VTFIDDFSR+VWVY +K KDEV G F +WKT +E +TG+ +K LRTDNG E+
Sbjct: 821  SGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEF 878


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  202 bits (514), Expect = 4e-50
 Identities = 101/182 (55%), Positives = 125/182 (68%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  +LY+ QG T++G  AAV DS +  +     LWHMRLGH  E 
Sbjct: 331 LKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAAVTDSLSNSD-----LWHMRLGHMSEI 385

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP++  
Sbjct: 386 GLAELSKRGLLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWGPARKR 445

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K E   +F +WKT +E QT RK+KVLRTDNG E+
Sbjct: 446 SFGGARYMMTIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEF 505

Query: 535 TS 540
            S
Sbjct: 506 CS 507


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  202 bits (513), Expect = 6e-50
 Identities = 101/182 (55%), Positives = 125/182 (68%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMK-GIRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV DS +   S+A  LWHMRLGH  E 
Sbjct: 361 LKVTKGSLVVMKVDIKSANLYHLRGTTILGNVAAVFDSLSN--SDATNLWHMRLGHMSEI 418

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+GLL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP+   
Sbjct: 419 GLAELSKRGLLDGQSIRKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAHKT 478

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +    F +WKT +E QT RK+K+LRTDNG E+
Sbjct: 479 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERKVKILRTDNGMEF 538

Query: 535 TS 540
            S
Sbjct: 539 CS 540


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  201 bits (511), Expect = 1e-49
 Identities = 99/182 (54%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 424 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 481

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+ LL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP+   
Sbjct: 482 GLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKT 541

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT +K+K+LRTDNG E+
Sbjct: 542 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEF 601

Query: 535 TS 540
            S
Sbjct: 602 CS 603


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  201 bits (511), Expect = 1e-49
 Identities = 99/182 (54%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEK 174
           LK T GSLVVMK  I+  NLY+ +G T++G  AAV+DS +   S+A  LWHMRLGH  E 
Sbjct: 424 LKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEI 481

Query: 175 SLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTP 354
            L  L+K+ LL    + KL FCEHC+ GK KRVKF T  H TEGILDYVHSD+WGP+   
Sbjct: 482 GLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKT 541

Query: 355 SLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           S GG  Y +T +DD+SR+VW Y +K K +   +F +WKT +E QT +K+K+LRTDNG E+
Sbjct: 542 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEF 601

Query: 535 TS 540
            S
Sbjct: 602 CS 603


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  198 bits (503), Expect = 8e-49
 Identities = 95/178 (53%), Positives = 122/178 (68%)
 Frame = +1

Query: 1   LKATSGSLVVMKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSL 180
           L+   GS +++KG+ R  LY+ QG+TV G+A VA S   ++ +  KLWH+RLGH GE+ +
Sbjct: 368 LRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQK-DMTKLWHIRLGHMGERGM 426

Query: 181 QTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTPSL 360
           Q L+K+ LL   KV  L+FCEHCV GK  R KF   IH T+G LDY+HSD WGP +  SL
Sbjct: 427 QILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESL 486

Query: 361 GGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEY 534
           GG  +FV+ IDD+SR  WVY MK K E    F +WK  +ENQTG+KIK LRTDNG E+
Sbjct: 487 GGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEF 544


>gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospermum
           erythrorhizon]
          Length = 244

 Score =  197 bits (501), Expect = 1e-48
 Identities = 92/181 (50%), Positives = 122/181 (67%)
 Frame = +1

Query: 1   LKATSGSLVVMKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSL 180
           LK    SLVVMKG+   NLY   G  V G  AV    ++ ++E   +WHMRLGH  EK L
Sbjct: 64  LKVVRRSLVVMKGVSHGNLYPLVGTMVTGDLAVGVVGHKDQTECTMIWHMRLGHMSEKGL 123

Query: 181 QTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTPSL 360
             L+ QGLLK++K   ++FCEH V GK  R+KF T  H + G+LDYVH+D+WGP+K  S 
Sbjct: 124 SLLSGQGLLKNMKKSCMEFCEHWVYGKTHRLKFFTSKHKSRGLLDYVHTDLWGPAKVNSK 183

Query: 361 GGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYTS 540
            G  YFVTF+DD+SR  W+Y +K K+EV  IF +W+  +EN+TGRK+K +R+DNG EYT 
Sbjct: 184 DGSWYFVTFVDDYSRYAWIYFLKHKNEVFDIFKQWRAMVENRTGRKLKTVRSDNGKEYTE 243

Query: 541 D 543
           +
Sbjct: 244 E 244


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  195 bits (496), Expect = 5e-48
 Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
 Frame = +1

Query: 1   LKATSGSLVVMKG-IRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLGHAGEKS 177
           LK + GSLV +KG +    LY  +G T+ G+ + A +    E     LWHMRLGH     
Sbjct: 380 LKVSKGSLVCLKGDVNSAKLYVLRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLG 439

Query: 178 LQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTVIHNTEGILDYVHSDVWGPSKTPS 357
           +  L K+ LLK     K+ FCEHC+ GK KRV+F T +H T+G LDYVH+D+WGPSK PS
Sbjct: 440 MTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPS 499

Query: 358 LGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYT 537
           LGG  Y +T IDD+SR+VW Y +K KD+    F  WK  IE QT RK+K+LRTDNGGE+ 
Sbjct: 500 LGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFC 559

Query: 538 S 540
           S
Sbjct: 560 S 560