BLASTX nr result
ID: Rehmannia24_contig00025573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00025573
(418 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 208 7e-52
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 208 7e-52
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 208 7e-52
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 205 4e-51
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 205 6e-51
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 205 6e-51
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 191 9e-47
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 189 3e-46
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 189 3e-46
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 184 8e-45
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 180 2e-43
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 180 2e-43
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 177 1e-42
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 176 3e-42
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [... 175 5e-42
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 174 8e-42
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 174 1e-41
ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thali... 172 4e-41
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 172 5e-41
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 168 8e-40
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 208 bits (529), Expect = 7e-52
Identities = 93/139 (66%), Positives = 109/139 (78%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D KKP+ NGLLD MGP NK C TC+G F ECPGH GYLALALPVYNVGYL+ IVDI
Sbjct: 45 DANKKPVSNGLLDMRMGPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDI 104
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSRVLLEEKE FL+KMRN + EPLKK ++ K +VK+CN+ AGS + KC R
Sbjct: 105 LKCICKNCSRVLLEEKEHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAKCPR 164
Query: 361 CGYINGMVKRAPLRIQHDR 417
CG+INGMVKRAP ++ +DR
Sbjct: 165 CGHINGMVKRAPYKVMYDR 183
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 208 bits (529), Expect = 7e-52
Identities = 97/141 (68%), Positives = 115/141 (81%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D +KPI+NGLLDP MGPANK G C TC G F +CPGHCGYL LALPVYNVGYL+TIVDI
Sbjct: 49 DANRKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDI 108
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSRVLL+EK + +L+KMR+ K E LKK E++K +V+KC AMA SK+AVKCSR
Sbjct: 109 LKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSR 168
Query: 361 CGYINGMVKRA--PLRIQHDR 417
CGY+NG+VK+A L I HDR
Sbjct: 169 CGYMNGIVKKAVSVLGIIHDR 189
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 208 bits (529), Expect = 7e-52
Identities = 97/141 (68%), Positives = 115/141 (81%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D +KPI+NGLLDP MGPANK G C TC G F +CPGHCGYL LALPVYNVGYL+TIVDI
Sbjct: 49 DANRKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDI 108
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSRVLL+EK + +L+KMR+ K E LKK E++K +V+KC AMA SK+AVKCSR
Sbjct: 109 LKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSR 168
Query: 361 CGYINGMVKRA--PLRIQHDR 417
CGY+NG+VK+A L I HDR
Sbjct: 169 CGYMNGIVKKAVSVLGIIHDR 189
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 205 bits (522), Expect = 4e-51
Identities = 91/139 (65%), Positives = 113/139 (81%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
+ TKKPI NGLLDP MGP NK G C+TC+G F ECPGH GYL LALPVYNVGYL T+VDI
Sbjct: 52 ESTKKPIQNGLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDI 111
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CS +LL++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG ++ CS+
Sbjct: 112 LKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSK 171
Query: 361 CGYINGMVKRAPLRIQHDR 417
CGY+NGMVK+ L+I H++
Sbjct: 172 CGYMNGMVKKLQLKITHEQ 190
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 205 bits (521), Expect = 6e-51
Identities = 91/139 (65%), Positives = 113/139 (81%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
+ TKKPI NGLLDP MGP NK G C+TC+G F ECPGH GYL LALPVYNVGYL T+VDI
Sbjct: 52 ESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDI 111
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CS +LL++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG ++ CS+
Sbjct: 112 LKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSK 171
Query: 361 CGYINGMVKRAPLRIQHDR 417
CGY+NGMVK+ L+I H++
Sbjct: 172 CGYMNGMVKKLQLKITHEQ 190
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 205 bits (521), Expect = 6e-51
Identities = 91/139 (65%), Positives = 113/139 (81%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
+ TKKPI NGLLDP MGP NK G C+TC+G F ECPGH GYL LALPVYNVGYL T+VDI
Sbjct: 52 ESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDI 111
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CS +LL++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG ++ CS+
Sbjct: 112 LKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSK 171
Query: 361 CGYINGMVKRAPLRIQHDR 417
CGY+NGMVK+ L+I H++
Sbjct: 172 CGYMNGMVKKLQLKITHEQ 190
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 191 bits (485), Expect = 9e-47
Identities = 90/141 (63%), Positives = 114/141 (80%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D +PI+ GLLDP MGPANK G C TC+G FA+CPGH GYL+LALPVYNVGYL+TI+DI
Sbjct: 47 DPKSRPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDI 106
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSR++L+EK + +L++MR+ K + LKK +I+K++VKKC+AMA SK AVKC R
Sbjct: 107 LKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSK-AVKCWR 165
Query: 361 CGYINGMVKR--APLRIQHDR 417
CGY+NG VK+ A L I HDR
Sbjct: 166 CGYVNGTVKKAVAMLGIIHDR 186
>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 232
Score = 189 bits (480), Expect = 3e-46
Identities = 83/127 (65%), Positives = 107/127 (84%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D +KP+++GLLDP MGPANK C TC+G+F++CPGH GYL LALPVYNVGYL+TI+DI
Sbjct: 55 DPNRKPVEDGLLDPRMGPANKFSECATCHGRFSDCPGHYGYLKLALPVYNVGYLSTILDI 114
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSR+LL+EK R+ FL+KMR++K EPLKK E++K +VKKCN+ +AVKCS+
Sbjct: 115 LKCICKSCSRILLDEKLRKDFLKKMRSSKMEPLKKGELMKKIVKKCNS-----KAVKCSK 169
Query: 361 CGYINGM 381
CGYING+
Sbjct: 170 CGYINGL 176
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 189 bits (480), Expect = 3e-46
Identities = 91/141 (64%), Positives = 112/141 (79%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D KK I GLLD MG NK G C+TC G F +CPGH GYL L LPVYNVGYL+TI+DI
Sbjct: 52 DANKKAIVGGLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDI 111
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSRVL++EK R+++L++MRN +TEPLKKNE++K +VKKC++MA SK AVKC R
Sbjct: 112 LKCICKSCSRVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSK-AVKCLR 170
Query: 361 CGYINGMVKRA--PLRIQHDR 417
CGY+NGMVK+A + I HDR
Sbjct: 171 CGYMNGMVKKAGSVVGIIHDR 191
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 184 bits (468), Expect = 8e-45
Identities = 89/136 (65%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Frame = +1
Query: 16 PIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCIC 195
PI+ GLLDP MGPANK C TC+G F+ CPGH GYL LALPVYNVGYL+TI+DI+KCIC
Sbjct: 61 PIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCIC 120
Query: 196 KKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYIN 375
K CSR+LLEEK + +L+KMRN K E L+K +++K++VKKC+ MA +AVKC RCGYIN
Sbjct: 121 KYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA--SKAVKCPRCGYIN 178
Query: 376 GMVKR--APLRIQHDR 417
GMVK+ A L I HDR
Sbjct: 179 GMVKKAVAVLGIIHDR 194
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 180 bits (457), Expect = 2e-43
Identities = 85/143 (59%), Positives = 103/143 (72%), Gaps = 4/143 (2%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
DH+ KP +NGLLDP MGP NK C TC G F CPGH GYL L LPVYNVGY N I+DI
Sbjct: 51 DHSFKPYENGLLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDI 110
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK+CS +LL+EK + L+KMRN + EPLKK E+ K VVKKC+ MA S+R + C +
Sbjct: 111 LKCICKRCSNMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMA-SQRIITCKK 169
Query: 361 CGYINGMVKRAP----LRIQHDR 417
CGY+NGMVK+ + I HDR
Sbjct: 170 CGYLNGMVKKIAAQFGIGISHDR 192
>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1376
Score = 180 bits (457), Expect = 2e-43
Identities = 85/143 (59%), Positives = 103/143 (72%), Gaps = 4/143 (2%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
DH+ KP +NGLLDP MGP NK C TC G F CPGH GYL L LPVYNVGY N I+DI
Sbjct: 51 DHSFKPYENGLLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDI 110
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK+CS +LL+EK + L+KMRN + EPLKK E+ K VVKKC+ MA S+R + C +
Sbjct: 111 LKCICKRCSNMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMA-SQRIITCKK 169
Query: 361 CGYINGMVKRAP----LRIQHDR 417
CGY+NGMVK+ + I HDR
Sbjct: 170 CGYLNGMVKKIAAQFGIGISHDR 192
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 177 bits (449), Expect = 1e-42
Identities = 77/131 (58%), Positives = 101/131 (77%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D T+KPID GLLDP MGPANK C TC+ F +CPGH GY+ LALPV+NVGY TI++I
Sbjct: 53 DTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEI 112
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSR+LLEEK + FL+KMRN K E L+K +++K ++KKC+ + ++ +CSR
Sbjct: 113 LKCICKSCSRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSR 172
Query: 361 CGYINGMVKRA 393
CGY+NG VK+A
Sbjct: 173 CGYLNGSVKKA 183
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 176 bits (446), Expect = 3e-42
Identities = 84/143 (58%), Positives = 100/143 (69%), Gaps = 4/143 (2%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
D KP + GLLDP MGP NK C TC G F CPGH GYL L LPVYN+GY N I+DI
Sbjct: 51 DPNCKPFEGGLLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDI 110
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CS +LL+EK + L+KMRN K EPLKK E+ K VVKKC+ MA S+R + C +
Sbjct: 111 LKCICKCCSNMLLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA-SQRIITCKK 169
Query: 361 CGYINGMVKRAP----LRIQHDR 417
CGY+NGMVK+ P + I HDR
Sbjct: 170 CGYLNGMVKKIPAQMGIGISHDR 192
>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 175 bits (444), Expect = 5e-42
Identities = 85/142 (59%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKM-GFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVD 177
D +KPI+ GLLDP +GPANK G C TC +CPGH G+L LALPV NVGYL+T+VD
Sbjct: 56 DPNQKPIEGGLLDPRLGPANKSSGECATCGAVMKDCPGHFGFLVLALPVLNVGYLSTVVD 115
Query: 178 IMKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCS 357
I+KCICK CS +LLEE R FL+KMR+ K EPL+K E++K +VKKCN + + R VKCS
Sbjct: 116 ILKCICKLCSGILLEEGMRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLTTNYRPVKCS 175
Query: 358 RCGYINGMVKRA--PLRIQHDR 417
+CG+ING VK+A L I HDR
Sbjct: 176 KCGFINGSVKKAVGVLGIIHDR 197
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 174 bits (442), Expect = 8e-42
Identities = 89/151 (58%), Positives = 108/151 (71%), Gaps = 17/151 (11%)
Frame = +1
Query: 16 PIDNGLLDPHM---------------GPANKMGFCKTCYGKFAECPGHCGYLALALPVYN 150
PI+ GLLDP M GPANK C TC+G F+ CPGH GYL LALPVYN
Sbjct: 61 PIEGGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYN 120
Query: 151 VGYLNTIVDIMKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMA 330
VGYL+TI+DI+KCICK CSR+LLEEK + +L+KMRN K E L+K +++K++VKKC+ MA
Sbjct: 121 VGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA 180
Query: 331 GSKRAVKCSRCGYINGMVKR--APLRIQHDR 417
+AVKC RCGYINGMVK+ A L I HDR
Sbjct: 181 --SKAVKCPRCGYINGMVKKAVAVLGIIHDR 209
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 174 bits (440), Expect = 1e-41
Identities = 81/140 (57%), Positives = 100/140 (71%), Gaps = 5/140 (3%)
Frame = +1
Query: 13 KPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCI 192
KP++ GLLDP MGP NK C TC+ F CPGH GYL L LPVYNVG+LN I+DI+KCI
Sbjct: 55 KPVEGGLLDPRMGPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCI 114
Query: 193 CKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYI 372
CK+CS +L++EK + L+KMRN K EPLKK E+ K VVKKC+ MA S+R + C CGY+
Sbjct: 115 CKRCSNILIDEKLYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMA-SQRIITCKNCGYL 173
Query: 373 NGMVKRAP-----LRIQHDR 417
NGMVK+ + I HDR
Sbjct: 174 NGMVKKVAAQMGIIGISHDR 193
>ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009887|gb|AED97270.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1391
Score = 172 bits (436), Expect = 4e-41
Identities = 85/153 (55%), Positives = 103/153 (67%), Gaps = 14/153 (9%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
DH+ KP +NGLLDP MGP NK C TC G F CPGH GYL L LPVYNVGY N I+DI
Sbjct: 51 DHSFKPYENGLLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDI 110
Query: 181 MKCICK----------KCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMA 330
+KCICK +CS +LL+EK + L+KMRN + EPLKK E+ K VVKKC+ MA
Sbjct: 111 LKCICKVTELADYVSLRCSNMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMA 170
Query: 331 GSKRAVKCSRCGYINGMVKRAP----LRIQHDR 417
S+R + C +CGY+NGMVK+ + I HDR
Sbjct: 171 -SQRIITCKKCGYLNGMVKKIAAQFGIGISHDR 202
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 172 bits (435), Expect = 5e-41
Identities = 82/139 (58%), Positives = 99/139 (71%), Gaps = 4/139 (2%)
Frame = +1
Query: 13 KPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDIMKCI 192
KP +NGLLD MGP NK C TC G F CPGH GYL L LPVYNVG+ N I+DI+KCI
Sbjct: 55 KPYENGLLDARMGPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCI 114
Query: 193 CKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYI 372
CK+CS +LL+EK + L+KMRN K EPLKK E+ K VVKKC+ MA S+R + C +CGY+
Sbjct: 115 CKRCSNMLLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA-SQRIITCKKCGYL 173
Query: 373 NGMVKRAP----LRIQHDR 417
NGMVK+ + I HDR
Sbjct: 174 NGMVKKIAAQMGIGISHDR 192
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 168 bits (425), Expect = 8e-40
Identities = 81/140 (57%), Positives = 100/140 (71%), Gaps = 2/140 (1%)
Frame = +1
Query: 1 DHTKKPIDNGLLDPHMGPANKMGFCKTCYGKFAECPGHCGYLALALPVYNVGYLNTIVDI 180
+H KP+ NGLLD MG ANK+G C TC+G FAECPGH GYL LALPV+NVG+ N I+D+
Sbjct: 52 NHEMKPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDV 111
Query: 181 MKCICKKCSRVLLEEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSR 360
+KCICK CSRVLL EK+R FL+KMRN K +PL+K+ I+K V KC + +C
Sbjct: 112 LKCICKSCSRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC-------KLSRCPW 164
Query: 361 CGYINGMVK--RAPLRIQHD 414
CG+ING+ K RA L I HD
Sbjct: 165 CGFINGVAKKGRAGLIILHD 184