BLASTX nr result

ID: Rehmannia24_contig00025469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025469
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ01284.1| hypothetical protein PRUPE_ppa021085mg, partial [...    55   7e-06
ref|XP_003626920.1| GRF zinc finger containing protein [Medicago...    55   7e-06
ref|XP_003595157.1| GRF zinc finger containing protein [Medicago...    55   7e-06

>gb|EMJ01284.1| hypothetical protein PRUPE_ppa021085mg, partial [Prunus persica]
          Length = 83

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
 Frame = +3

Query: 3   NPGRRFHSCPD----RRCGFFEWYDPMMCRRSTQIIPGLIRTINQRQD 134
           NPGRRF  C D    R C FFEWYDP +C RS  +I GL++ + + ++
Sbjct: 30  NPGRRFWGCADYEVRRGCAFFEWYDPQVCERSKIVISGLLKRLRKEEN 77


>ref|XP_003626920.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355520942|gb|AET01396.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +3

Query: 3   NPGRRFHSCP----DRRCGFFEWYDPMMCRRSTQIIPGLIRTINQRQDTINQMKLRERKY 170
           NPGRRFH C      R+C FF WYDP +  R  +II  L+R         +++K +ER +
Sbjct: 38  NPGRRFHGCGRYFVGRKCNFFRWYDPEVPDRQKKIIRALLR-------KNDELKKKERSF 90

Query: 171 IITLIVSWIVLGVVIFFA 224
           +I +    +VLG+++F +
Sbjct: 91  VIVI----VVLGMMLFMS 104


>ref|XP_003595157.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355484205|gb|AES65408.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 106

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +3

Query: 3   NPGRRFHSCP----DRRCGFFEWYDPMMCRRSTQIIPGLIRTINQRQDTINQMKLRERKY 170
           NPGRRFH C      R+C FF WYDP +  R  +II  L+R         +++K +ER +
Sbjct: 38  NPGRRFHGCGRDFVGRKCNFFRWYDPEVPDRQKKIIRALLR-------KNDELKKKERSF 90

Query: 171 IITLIVSWIVLGVVIFFA 224
           +I +    +VLG+++F +
Sbjct: 91  VIVI----VVLGMMLFMS 104


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