BLASTX nr result

ID: Rehmannia24_contig00025412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025412
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20378.3| unnamed protein product [Vitis vinifera]               88   1e-15
ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247...    88   1e-15
ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus tri...    66   5e-09
ref|XP_002330422.1| predicted protein [Populus trichocarpa] gi|5...    61   2e-07
ref|XP_006362933.1| PREDICTED: uncharacterized protein DDB_G0271...    61   2e-07
ref|XP_004248504.1| PREDICTED: uncharacterized protein LOC101243...    57   2e-06

>emb|CBI20378.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 69/195 (35%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
 Frame = -3

Query: 540 TSRSFGYSSGLLSNLRDSIRKSYVTRQASRVEIKCMXXXXXXXXXXXXXXXXXSLHPGCG 361
           +S  FG++SGLLS +R ++RKS  TRQASRVEI                    S +PG  
Sbjct: 210 SSGPFGHTSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSAGKSSVGSSSNPGYD 269

Query: 360 GMSSMVTE--NMDKTPDSRSILTVSQLPTNQVNRGNLHKAP-----------AARARNMI 220
                 TE  N D+TPDSR+++  SQ   N+       KA                + ++
Sbjct: 270 VKDRTATEIRNRDRTPDSRNVMRTSQTAVNRGRASTTSKASNILVDYRTNNSRKEGKRIV 329

Query: 219 CKS---DLRIKKVASETMDRKKHTEGCVTRGVNKRVPLTTAKNSTRARLVNPSSRTVDGG 49
            KS   D    KV  +T++RK    G V   VN++ PLT A  +     V  S+R   GG
Sbjct: 330 AKSTTKDAVKSKVVCQTINRK----GLVPLRVNEQDPLTAATKAKSKVGVGASNRLAGGG 385

Query: 48  KENQSGKMALTIKSS 4
           KEN SGK+A++ KSS
Sbjct: 386 KENASGKLAVSQKSS 400


>ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247040 [Vitis vinifera]
          Length = 445

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 69/195 (35%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
 Frame = -3

Query: 540 TSRSFGYSSGLLSNLRDSIRKSYVTRQASRVEIKCMXXXXXXXXXXXXXXXXXSLHPGCG 361
           +S  FG++SGLLS +R ++RKS  TRQASRVEI                    S +PG  
Sbjct: 200 SSGPFGHTSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSAGKSSVGSSSNPGYD 259

Query: 360 GMSSMVTE--NMDKTPDSRSILTVSQLPTNQVNRGNLHKAP-----------AARARNMI 220
                 TE  N D+TPDSR+++  SQ   N+       KA                + ++
Sbjct: 260 VKDRTATEIRNRDRTPDSRNVMRTSQTAVNRGRASTTSKASNILVDYRTNNSRKEGKRIV 319

Query: 219 CKS---DLRIKKVASETMDRKKHTEGCVTRGVNKRVPLTTAKNSTRARLVNPSSRTVDGG 49
            KS   D    KV  +T++RK    G V   VN++ PLT A  +     V  S+R   GG
Sbjct: 320 AKSTTKDAVKSKVVCQTINRK----GLVPLRVNEQDPLTAATKAKSKVGVGASNRLAGGG 375

Query: 48  KENQSGKMALTIKSS 4
           KEN SGK+A++ KSS
Sbjct: 376 KENASGKLAVSQKSS 390


>ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus trichocarpa]
          Length = 565

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
 Frame = -3

Query: 537 SRSFGYSSGLLSNLRDSIRKSYVTRQASRVEIKC-MXXXXXXXXXXXXXXXXXSLHPGCG 361
           SR F ++SGLLS +R+ +RKS+VTR+ASRVEIK                    SL PG  
Sbjct: 210 SRGFDHTSGLLSAVRNGLRKSFVTRKASRVEIKDENKQLRDRKSSSSKSSVGSSLKPGHD 269

Query: 360 GMSSMVT--ENMDKTPDSRSILTVSQLPTNQVNRGNLHKAPAARARNMICKSDLRIKKVA 187
             SS +T   N ++TPDSR++  +++    +    N+ K    R + +       I  V+
Sbjct: 270 VKSSTITLMRNKEQTPDSRNVARMTEAARKKKKDSNMSKTSDVRVKEVFNSRKGAISNVS 329

Query: 186 ----SETMDRK------KHTEGCVTRGVNKRVPLTTAKNSTRARLVNPSSRTVDGGKENQ 37
                E +  K      + T     RG  +     TAK+  + R V+  ++ V  GKEN 
Sbjct: 330 KSAPQEALKSKVQKQTIRVTALAEHRGNKQHSLPGTAKSKEKVR-VSRLNKMVAPGKENV 388

Query: 36  SGKMALT 16
            GKM+L+
Sbjct: 389 MGKMSLS 395


>ref|XP_002330422.1| predicted protein [Populus trichocarpa]
           gi|566154168|ref|XP_006370339.1| hypothetical protein
           POPTR_0001s41790g [Populus trichocarpa]
           gi|550349518|gb|ERP66908.1| hypothetical protein
           POPTR_0001s41790g [Populus trichocarpa]
          Length = 490

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 12/191 (6%)
 Frame = -3

Query: 540 TSRSFGYSSGLLSNLRDSIRKSYVTRQASRVEIKC-MXXXXXXXXXXXXXXXXXSLHPGC 364
           +SR F ++SGLLS +R+ +RKS+VTR+ASRVEI                     S +PG 
Sbjct: 208 SSRGFDHASGLLSAVRNGLRKSFVTRKASRVEINDENKQLRDRKSSSSKSSWGSSSNPGY 267

Query: 363 GGMSSMVTENMDKTPDSRSILTVSQLPTNQVNRGNLHKAPAARARNMICKS--------- 211
              SS +    ++TPDSR++  +++    +    ++ +A   R +  +  S         
Sbjct: 268 DAKSSTLAFK-EQTPDSRNVARMTEAARKKTKDSDMSRASDVRVKEKVFNSRKGGISNVA 326

Query: 210 -DLRIKKVASETMDRKKHTEGCVTRGVNKRVPLT-TAKNSTRARLVNPSSRTVDGGKENQ 37
               ++ + S+  ++    +       N+  PL  TAK   + R V   ++ V  GKEN 
Sbjct: 327 KSASLEALKSKVQNQTLRVKALADHRGNELHPLPGTAKAKEKVR-VGGINKLVGPGKENV 385

Query: 36  SGKMALTIKSS 4
           +GK +L++  S
Sbjct: 386 TGKASLSLNCS 396


>ref|XP_006362933.1| PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum
           tuberosum]
          Length = 473

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
 Frame = -3

Query: 525 GYSSGLLSNLRDSIRKSYVTRQASRVEIKCMXXXXXXXXXXXXXXXXXSLHPGCGGMSSM 346
           G ++GLLS+LR S+RKS VTRQASR+E+                    S  P        
Sbjct: 244 GQTTGLLSSLRVSLRKSCVTRQASRMEVNVCRQSEGRKSSSSKSSVGSSSIPYKEREGET 303

Query: 345 VTENMDKTPDSRSILTV--------SQLPTNQVNRGNLHKAPAARARNMICKSDLRIKKV 190
             E+ +KTPDSR++ T+        S++P    NR ++ K    R+ +    ++    KV
Sbjct: 304 ERESKEKTPDSRNVTTIVEAKLANKSKVPVQAHNRTSIPKMVTGRSVSSSVPTETNRPKV 363

Query: 189 ASETMDRKKHTEGCVTRGVNKRVPLTTAKNSTRARLVNPSSRTVDGGKENQSGKMALTIK 10
               + RK      V +  N RV        +     +   R V  GKEN   KM ++ K
Sbjct: 364 HLTNVQRK----ALVPQRANGRVASILVSKPSERIGSSHCRRVVSSGKENAVVKMGMSQK 419

Query: 9   S 7
           S
Sbjct: 420 S 420


>ref|XP_004248504.1| PREDICTED: uncharacterized protein LOC101243644 [Solanum
           lycopersicum]
          Length = 463

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
 Frame = -3

Query: 525 GYSSGLLSNLRDSIRKSYVTRQASRVEIKCMXXXXXXXXXXXXXXXXXSLHPGCGGMSSM 346
           G ++GLLS+LR S+RKS VTRQASR+E+                    S  P        
Sbjct: 234 GQTTGLLSSLRVSLRKSCVTRQASRMEVNVCRQPEGRKSSSSKSSVGSSSIPYKEREGET 293

Query: 345 VTENMDKTPDSRSILTV--------SQLPTNQVNRGNLHKAPAARARNMICKSDLRIKKV 190
             E+ +KTP+SR++ T+        S++P    NR ++ K    R  +    S+    KV
Sbjct: 294 ERESKEKTPESRNVTTIVEAKQANKSKVPVQAHNRTSIPKMVTGRTVSSSVSSETSRPKV 353

Query: 189 ASETMDRKKHTEGCVTRGVNKRVPLTTAKNSTRARLVNPSSRTVDGGKENQSGKMALTIK 10
               + RK      V +  N RV        +     +   R V  GKEN   +  ++ K
Sbjct: 354 HPTNVQRK----ALVPQRANGRVASILVSKPSERIGSSHCRRVVSSGKENDVVRKGISQK 409

Query: 9   S 7
           S
Sbjct: 410 S 410


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