BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025398
         (876 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containi...   270   5e-70
ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containi...   266   6e-69
emb|CBI34116.3| unnamed protein product [Vitis vinifera]              227   5e-57
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...   227   5e-57
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...   206   7e-51
gb|EOX92409.1| Pentatricopeptide repeat-containing protein, puta...   206   9e-51
gb|EOX92408.1| Pentatricopeptide repeat-containing protein, puta...   206   9e-51
gb|EOX92407.1| Pentatricopeptide repeat-containing protein, puta...   206   9e-51
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...   199   9e-49
ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-44
ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-44
gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus...   185   2e-44
ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citr...   184   4e-44
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...   183   6e-44
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi...   183   6e-44
ref|XP_002305039.1| pentatricopeptide repeat-containing family p...   183   8e-44
ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-42
ref|XP_004491840.1| PREDICTED: pentatricopeptide repeat-containi...   178   2e-42
ref|XP_002880834.1| pentatricopeptide repeat-containing protein ...   164   5e-38
ref|XP_003621292.1| Pentatricopeptide repeat-containing protein ...   161   3e-37

>ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Solanum lycopersicum]
          Length = 644

 Score =  270 bits (690), Expect = 5e-70
 Identities = 143/277 (51%), Positives = 188/277 (67%), Gaps = 2/277 (0%)
 Frame = -3

Query: 826 MLVSTIRSVSHKKLFKNLQFVRLQSVPSHAHFTPYFSDSGSEDLSPDS--RNNVIATXXX 653
           M VS+IR  S +K FKN+QF+RL+S  S A  +PY SDS S++   ++  +NN ++    
Sbjct: 1   MWVSSIRLASCRKFFKNIQFIRLKSASSVAQLSPYLSDSSSDEQIGNTHMKNNELSNNTI 60

Query: 652 XXXXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWG 473
                          V E+L +++ EP  AL FF QLKE GF+HDIQ+Y+A+I+  C WG
Sbjct: 61  EVNSYW---------VTEMLNSLREEPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWG 111

Query: 472 LDRKLDSLFKGIINSKKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMF 293
           +D KLDSLF  +IN  K    FEVS+L E + E L  +  +SLVRA D L+K+YA+  MF
Sbjct: 112 MDMKLDSLFLEVINLGKKGLGFEVSDLFEELVEGLNAEGPNSLVRALDGLVKAYASLRMF 171

Query: 292 DEAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIM 113
           DEAID LF+TKR   G  +LSCN+L+NRLV +GKVD AVA+YKQLK I +SPNVYTYGI+
Sbjct: 172 DEAIDVLFQTKRCGFGLSVLSCNYLMNRLVEYGKVDMAVAVYKQLKRISVSPNVYTYGIV 231

Query: 112 IKAYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
           IKA CRK NFEEA  +F EM++AG  PN + Y+ Y+E
Sbjct: 232 IKALCRKGNFEEAVGVFEEMEKAGETPNEFTYSTYIE 268



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
 Frame = -3

Query: 544 LKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELLEAIAEELK 365
           ++E+G   D  SY A+I   C  G   K  +    +        C   S +L+ + +  K
Sbjct: 321 MEEQGMVPDAVSYGAVINGYCTAGNISKALAFHDKMETRGIRSNCVIFSLILQCLCKNGK 380

Query: 364 D----DEQSSLVR--------AFDTLIKSYATFGMFDEAIDTLFETKRHRVGPCLLSCNF 221
                ++ SS  +        A++ +I +    G F+EA   L E K  R+ P ++    
Sbjct: 381 ACDAVEQFSSFKKKGIFLDEVAYNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTT 440

Query: 220 LINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMDEAG 41
           LIN    HG++  A+ ++ ++K  GL P++ TY ++   + R    +EA  +   M   G
Sbjct: 441 LINGYCLHGQILDAMGLFDEMKQKGLKPDIITYNVLAGGFSRNGLVKEALHLLDHMKGQG 500

Query: 40  VVPNAYPYTAYLE 2
           ++P    +   +E
Sbjct: 501 LMPTTVTHNVIIE 513


>ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 829

 Score =  266 bits (681), Expect = 6e-69
 Identities = 143/277 (51%), Positives = 186/277 (67%), Gaps = 2/277 (0%)
 Frame = -3

Query: 826 MLVSTIRSVSHKKLFKNLQFVRLQSVPSHAHFTPYFSDSGSEDLSPDS--RNNVIATXXX 653
           M VS+IR  S++K+ KN QF+RL+SV S A  T Y SDS S++   ++  +NN +     
Sbjct: 1   MWVSSIRLASYRKILKNTQFIRLKSVSSVAQLTSYLSDSSSDEQIGNTHMKNNELTNNTV 60

Query: 652 XXXXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWG 473
                          V E+L +++ EP  AL FF QLKE GF+HDIQ+Y+A+I+  C WG
Sbjct: 61  EVNSYW---------VTEMLNSLREEPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWG 111

Query: 472 LDRKLDSLFKGIINSKKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMF 293
           +D KLDSLF  +IN  K    FEVS+L E + E L  +  +SLVRA D L+K+YA+  MF
Sbjct: 112 MDMKLDSLFLEVINLGKRGLGFEVSDLFEELVEGLNAEGPNSLVRALDGLVKAYASLRMF 171

Query: 292 DEAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIM 113
           DEAID LF+TKR   G  +LSCN+L+NRLV  GKVD AVA+YKQLK I +SPNVYTYGI+
Sbjct: 172 DEAIDVLFQTKRCGFGLSVLSCNYLMNRLVECGKVDMAVAVYKQLKRISVSPNVYTYGIV 231

Query: 112 IKAYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
           IKA CRK NFEEA  +F EM++AG  PN + Y+ Y+E
Sbjct: 232 IKALCRKGNFEEAVGVFEEMEKAGETPNEFTYSTYIE 268



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
 Frame = -3

Query: 544 LKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELLEAIAEELK 365
           ++E+G   D  SY A+I   C  G   K  +    +        C  VS +L+ + +  K
Sbjct: 321 MEEQGMVPDAVSYGAVINGYCTTGNISKALAFHDKMETRGIKSNCVIVSLILQCLCKNGK 380

Query: 364 D----DEQSSLVR--------AFDTLIKSYATFGMFDEAIDTLFETKRHRVGPCLLSCNF 221
                D+ SS  +        A++ +I +    G F+EA   L E K  R+ P ++    
Sbjct: 381 ARDAVDQFSSFKKKGIFLDEVAYNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTT 440

Query: 220 LINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMDEAG 41
           LIN    HG++  A+ ++ ++K  GL P++ TY ++   + R    +EA  +   M    
Sbjct: 441 LINGYCLHGQILDAMGLFDEMKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHMKGQK 500

Query: 40  VVPNAYPYTAYLE 2
           ++P    +   +E
Sbjct: 501 LMPTTVTHNVIIE 513



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
 Frame = -3

Query: 565  ALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCF------E 404
            A+   + +K +       ++  II+ LC+ G  ++ +  F  + N   ++         E
Sbjct: 489  AIHLLDHMKGQKLMPTTVTHNVIIEGLCIGGYGKEAEIFFNSLENKSAENYAAMVNGYCE 548

Query: 403  VSELLEAIAEELKDDEQSSLVRAFDTL--IKSYATFGMFDEAIDTLFETKRHRVGPCLLS 230
            +    +A    ++  +Q  L++    L  + S    G + +A+           G C + 
Sbjct: 549  LGNTKDAFELFVRLSKQGVLIKRKSRLKLLSSLCLEGEYGKALKLFEIVLSLGDGICKIM 608

Query: 229  CNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMD 50
            C+ LI  L   G +  A  ++  L   GL+P+V  Y +M+  YCR    +EA  +F +M 
Sbjct: 609  CSKLIASLCSAGDMKRARWVFDNLVWRGLTPDVVIYTMMLNGYCRVNRLQEAIYLFDDMK 668

Query: 49   EAGVVPNAYPYTAYLE 2
            + G+ P+   YT  L+
Sbjct: 669  KRGISPDVITYTVMLD 684


>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  227 bits (578), Expect = 5e-57
 Identities = 124/278 (44%), Positives = 167/278 (60%), Gaps = 3/278 (1%)
 Frame = -3

Query: 826 MLVSTIRSVSHKKLFKNLQFVRLQSVPSHAHFTPYFSDSGSEDLSPDSRNNVIATXXXXX 647
           M VS+ R VS +K   ++Q  R  SV   AH +P           P +    + T     
Sbjct: 1   MWVSSTRWVSCRKFITHVQLTRFNSVWGLAHLSPAAQ-------YPIAEEQAVYTYSKDS 53

Query: 646 XXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLD 467
                        VVEI  N++ EP  A  FF QLKE GFQH++ +Y A+I++LC W L+
Sbjct: 54  VGDRFIDLNTSR-VVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLE 112

Query: 466 RKLDSLFKGIINSKKDHRCFEVSELLEAIAE---ELKDDEQSSLVRAFDTLIKSYATFGM 296
           RKL SL   I+ SK+    F+++ L + + E   E++ +  S L+   D L+K+Y   GM
Sbjct: 113 RKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGM 172

Query: 295 FDEAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGI 116
           FDEAID LF+TKR    P ++SCNFL+NRL+ HGK+D AVAIY+ LK +GL+PN YTYGI
Sbjct: 173 FDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGI 232

Query: 115 MIKAYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
            IKA CRK NFEEA ++F EM+EAGV PNA   + Y+E
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIE 270



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 16/211 (7%)
 Frame = -3

Query: 586  MQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGI------INSK 425
            +Q + + A   F ++KE+G + DI +Y  ++      GL ++   L   I       NS 
Sbjct: 430  LQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSA 489

Query: 424  KDHRCFEVSELLEAI--AEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHR 251
              +R  E   +   +  AE   +  +   +  +  ++  Y       +A +      +  
Sbjct: 490  THNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQG 549

Query: 250  --------VGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCR 95
                    V P  +    LI      G +  A  ++  L   G++P+V TY +MI  YCR
Sbjct: 550  ILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCR 609

Query: 94   KQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
                 EA ++F +M E G+ P+   YT  L+
Sbjct: 610  VNCLREARDIFNDMKERGIKPDVITYTVVLD 640


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  227 bits (578), Expect = 5e-57
 Identities = 124/278 (44%), Positives = 167/278 (60%), Gaps = 3/278 (1%)
 Frame = -3

Query: 826 MLVSTIRSVSHKKLFKNLQFVRLQSVPSHAHFTPYFSDSGSEDLSPDSRNNVIATXXXXX 647
           M VS+ R VS +K   ++Q  R  SV   AH +P           P +    + T     
Sbjct: 1   MWVSSTRWVSCRKFITHVQLTRFNSVWGLAHLSPAAQ-------YPIAEEQAVYTYSKDS 53

Query: 646 XXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLD 467
                        VVEI  N++ EP  A  FF QLKE GFQH++ +Y A+I++LC W L+
Sbjct: 54  VGDRFIDLNTSR-VVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLE 112

Query: 466 RKLDSLFKGIINSKKDHRCFEVSELLEAIAE---ELKDDEQSSLVRAFDTLIKSYATFGM 296
           RKL SL   I+ SK+    F+++ L + + E   E++ +  S L+   D L+K+Y   GM
Sbjct: 113 RKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGM 172

Query: 295 FDEAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGI 116
           FDEAID LF+TKR    P ++SCNFL+NRL+ HGK+D AVAIY+ LK +GL+PN YTYGI
Sbjct: 173 FDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGI 232

Query: 115 MIKAYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
            IKA CRK NFEEA ++F EM+EAGV PNA   + Y+E
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIE 270



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
 Frame = -3

Query: 556  FFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLF-----KGIINSKKDHRCFEVSEL 392
            F N L++K     +++Y A++   C     RK   LF     +GI+  KK   CF+    
Sbjct: 529  FLNTLEDKC----LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKS--CFK---- 578

Query: 391  LEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRVGPCLLSCNFLIN 212
                                  L+ S    G +D+A+  L       V P  +    LI 
Sbjct: 579  ----------------------LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIG 616

Query: 211  RLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMDEAGVVP 32
                 G +  A  ++  L   G++P+V TY +MI  YCR     EA ++F +M E G+ P
Sbjct: 617  AFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP 676

Query: 31   NAYPYTAYLE 2
            +   YT  L+
Sbjct: 677  DVITYTVVLD 686


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score =  206 bits (525), Expect = 7e-51
 Identities = 117/276 (42%), Positives = 163/276 (59%), Gaps = 1/276 (0%)
 Frame = -3

Query: 826 MLVSTIRSVSHKKLFKNLQFVRLQSVPSHAHFTPYFSDSGSEDLSPDSRNNVIATXXXXX 647
           M VS+I+  S +K  K++ F+RL +V + AHF   +     + ++   +N V        
Sbjct: 1   MWVSSIKLFSCRKYIKHVNFIRLYTVSALAHFN--YPIEEEQTINTHYQNPV-------- 50

Query: 646 XXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLD 467
                      + VV  L N++ EP  A  +FNQLKE G+ HD  +Y AI++ILC WG  
Sbjct: 51  --TNHLFEINTAKVVITLNNLRNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWS 108

Query: 466 RKLDSLFKGIINSKKDHRC-FEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFD 290
           RKLDS+   II  KKD    F +  L EA+ + + ++  S LV+  D LIK     GMFD
Sbjct: 109 RKLDSILMEII--KKDGNLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFD 166

Query: 289 EAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMI 110
           +A D L +TK     P +LSCNFL+NRLV   KVD A+AIY+QLK  GL+PN YTY I I
Sbjct: 167 QAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAI 226

Query: 109 KAYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
           K +CRK N  EA ++F +M+E+GV PN++ YT ++E
Sbjct: 227 KGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIE 262



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 43/194 (22%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
 Frame = -3

Query: 547 QLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELLEA----- 383
           +++++GF  D+  Y A+I   C+ G   K  +L   +++      C  +S +L+      
Sbjct: 314 EMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMG 373

Query: 382 ----IAEELKDDEQSSLV---RAFDTLIKSYATFGMFDEAIDTLFETKRHRVGPCLLSCN 224
               +A + K+ ++  +      ++ ++ +    G  +EA++ L E K  ++ P +++  
Sbjct: 374 MASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYT 433

Query: 223 FLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMDEA 44
            +I+     GKV  A+ IY+++K IG  P++ TY ++   + R    +EA  +   M+  
Sbjct: 434 TVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQ 493

Query: 43  GVVPNAYPYTAYLE 2
           GV P+   +   +E
Sbjct: 494 GVKPDTVTHNMIIE 507



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
 Frame = -3

Query: 565  ALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFE------ 404
            AL   N ++ +G + D  ++  II+ LC+ G      + F  +     + +C E      
Sbjct: 483  ALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL-----EEKCLENYSAMV 537

Query: 403  -----VSELLEAIAEELKDDEQSSLVR--AFDTLIKSYATFGMFDEAIDTLFETKRHRVG 245
                  + + +A A  ++  +Q  +++  +F  L+ +  + G  ++A+  L       + 
Sbjct: 538  NGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNIN 597

Query: 244  PCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEM 65
            P ++  + +I  L   G+++ A  ++  L   GL+P+V TY IMI  YCR    +EA  +
Sbjct: 598  PTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHV 657

Query: 64   FLEMDEAGVVPNAYPYTAYL 5
              +M   G+ P+   YT  L
Sbjct: 658  LGDMKNRGIEPDVITYTVLL 677


>gb|EOX92409.1| Pentatricopeptide repeat-containing protein, putative isoform 3
           [Theobroma cacao]
          Length = 784

 Score =  206 bits (524), Expect = 9e-51
 Identities = 105/202 (51%), Positives = 140/202 (69%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           VV+ L N+ ++P  AL FFNQL E GF HD+ +Y AI++ILC WG DRKLDS+   II  
Sbjct: 39  VVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDRKLDSVLLEIIRK 98

Query: 427 KKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRV 248
           +K    FE+ +L EA+ E L+ ++   LVR  + L+K+Y +  MFDE I+ LF+T+R   
Sbjct: 99  EK-RLGFEIMDLCEALEEGLEGEDSYLLVRLSNALVKAYVSVEMFDEVINILFQTRRCGF 157

Query: 247 GPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAE 68
            P + SCNFL+NRL+  GK+D AVA Y+QLK IGL PN YTY I+IKA C+K + EEA  
Sbjct: 158 VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIKALCKKGSLEEAFN 217

Query: 67  MFLEMDEAGVVPNAYPYTAYLE 2
           +F EM+EA V PNA+ YT Y+E
Sbjct: 218 VFREMEEAEVRPNAFAYTTYIE 239


>gb|EOX92408.1| Pentatricopeptide repeat-containing protein, putative isoform 2
           [Theobroma cacao]
          Length = 818

 Score =  206 bits (524), Expect = 9e-51
 Identities = 105/202 (51%), Positives = 140/202 (69%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           VV+ L N+ ++P  AL FFNQL E GF HD+ +Y AI++ILC WG DRKLDS+   II  
Sbjct: 65  VVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDRKLDSVLLEIIRK 124

Query: 427 KKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRV 248
           +K    FE+ +L EA+ E L+ ++   LVR  + L+K+Y +  MFDE I+ LF+T+R   
Sbjct: 125 EK-RLGFEIMDLCEALEEGLEGEDSYLLVRLSNALVKAYVSVEMFDEVINILFQTRRCGF 183

Query: 247 GPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAE 68
            P + SCNFL+NRL+  GK+D AVA Y+QLK IGL PN YTY I+IKA C+K + EEA  
Sbjct: 184 VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIKALCKKGSLEEAFN 243

Query: 67  MFLEMDEAGVVPNAYPYTAYLE 2
           +F EM+EA V PNA+ YT Y+E
Sbjct: 244 VFREMEEAEVRPNAFAYTTYIE 265


>gb|EOX92407.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 792

 Score =  206 bits (524), Expect = 9e-51
 Identities = 105/202 (51%), Positives = 140/202 (69%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           VV+ L N+ ++P  AL FFNQL E GF HD+ +Y AI++ILC WG DRKLDS+   II  
Sbjct: 39  VVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDRKLDSVLLEIIRK 98

Query: 427 KKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRV 248
           +K    FE+ +L EA+ E L+ ++   LVR  + L+K+Y +  MFDE I+ LF+T+R   
Sbjct: 99  EK-RLGFEIMDLCEALEEGLEGEDSYLLVRLSNALVKAYVSVEMFDEVINILFQTRRCGF 157

Query: 247 GPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAE 68
            P + SCNFL+NRL+  GK+D AVA Y+QLK IGL PN YTY I+IKA C+K + EEA  
Sbjct: 158 VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIKALCKKGSLEEAFN 217

Query: 67  MFLEMDEAGVVPNAYPYTAYLE 2
           +F EM+EA V PNA+ YT Y+E
Sbjct: 218 VFREMEEAEVRPNAFAYTTYIE 239


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score =  199 bits (507), Expect = 9e-49
 Identities = 98/208 (47%), Positives = 141/208 (67%), Gaps = 6/208 (2%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGII-- 434
           VV+IL N++ +PISAL FFNQLK+ GF+HDI +Y AII+ILC WGL ++L S+F  II  
Sbjct: 69  VVDILYNLKNQPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYV 128

Query: 433 NSKKDHRCFEVSELLEAIAEELKDDEQSS----LVRAFDTLIKSYATFGMFDEAIDTLFE 266
           +   +   FE+S  L+ +++   D +       + + +D L+K+Y + GMFD+AID LF+
Sbjct: 129 SCNDNDTPFEISHFLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQ 188

Query: 265 TKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQN 86
             R R  P +  CNFL+N L+ + K+D A+A+YKQLK +GLSPN YTY I+IKA C   +
Sbjct: 189 MGRRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGS 248

Query: 85  FEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
            EEA  +  EM+E+G+ P  + YTAY+E
Sbjct: 249 LEEAMYVIKEMEESGITPTGFAYTAYIE 276



 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
 Frame = -3

Query: 337  AFDTLIKSYATFGMFDEAIDTLFETKRHRVGPCLLSCNFLI---------------NRLV 203
            A+  +I SY       EA+D   + K+  + P L++   L+               N   
Sbjct: 653  AYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKG 712

Query: 202  GHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMDEAGVVPNAY 23
            G+  +  A+AI+ ++K   + P+V  Y ++I  YC+  +  +A  +F EM E G+ P+  
Sbjct: 713  GNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDII 772

Query: 22   PYTAYL 5
             YTA L
Sbjct: 773  TYTALL 778


>ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score =  186 bits (472), Expect = 1e-44
 Identities = 102/238 (42%), Positives = 147/238 (61%)
 Frame = -3

Query: 715 DSGSEDLSPDSRNNVIATXXXXXXXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKE 536
           DS + D++  +RN ++A                   VV  L + + +P SA + F +LKE
Sbjct: 73  DSVTTDITNTNRNRLVADSETLE-------------VVNKLNSCKTKPNSAFLLFCKLKE 119

Query: 535 KGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELLEAIAEELKDDE 356
            GF+H++ +Y A+++ILC W LDRKLDSLF  +I    D   F + +LLEA+ EE+  + 
Sbjct: 120 DGFRHNVLTYCALVRILCYWRLDRKLDSLFLELIKGSGDVG-FGLKDLLEAMEEEV--EV 176

Query: 355 QSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAV 176
             S+VR FD L+KS     MFD+AID LF T+R      + + N+L+NRL+  G++  A+
Sbjct: 177 SPSIVRGFDALVKSLVNLNMFDDAIDVLFHTRRRGFVQHIFTINYLMNRLIECGELGAAL 236

Query: 175 AIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
           +IYKQLK IGL PN YTY I+IK +C +   EEA E+F EM+ AGV P+ + YTAY+E
Sbjct: 237 SIYKQLKGIGLVPNDYTYAIVIKGFCMEGRLEEAGEVFEEMELAGVAPSVFAYTAYIE 294


>ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568854934|ref|XP_006481071.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|568854936|ref|XP_006481072.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X3 [Citrus sinensis]
           gi|568854938|ref|XP_006481073.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X4 [Citrus sinensis]
           gi|568854940|ref|XP_006481074.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X5 [Citrus sinensis]
          Length = 831

 Score =  186 bits (471), Expect = 1e-44
 Identities = 107/275 (38%), Positives = 160/275 (58%)
 Frame = -3

Query: 826 MLVSTIRSVSHKKLFKNLQFVRLQSVPSHAHFTPYFSDSGSEDLSPDSRNNVIATXXXXX 647
           M V   +    ++  K++Q +  +SV + AH     SDS  E+ S ++ +N         
Sbjct: 22  MWVLAAKLFPFRQYIKHVQLIPSRSVSALAHLRLICSDSELEESSVNNEHN--------D 73

Query: 646 XXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLD 467
                        VVE L ++++EP  AL FF QLK  GF H++ +Y AI++ILC  G  
Sbjct: 74  EIKCSFSYLNTREVVEKLYSLRKEPKIALSFFEQLKRSGFSHNLCTYAAIVRILCCCGWQ 133

Query: 466 RKLDSLFKGIINSKKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDE 287
           +KL+S+   ++  K D   FE ++L+EA+  E      + L R  D +IK+Y + GMFDE
Sbjct: 134 KKLESMLLELVRKKTDAN-FEATDLIEALCGE----GSTLLTRLSDAMIKAYVSVGMFDE 188

Query: 286 AIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIK 107
            ID LF+  R      + SCN+ +N+LV  GKVD A+A+Y+ LK +GLS N YTY I+IK
Sbjct: 189 GIDILFQINRRGFVWSICSCNYFMNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIK 248

Query: 106 AYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
           A C+K + +EA E+FLEM++AGV PNA+ Y+  +E
Sbjct: 249 ALCKKGSMQEAVEVFLEMEKAGVTPNAFAYSTCIE 283



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
 Frame = -3

Query: 598 ILKNMQREPIS--ALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSK 425
           ILK + R  ++  A+  F + K+ GF  D   Y  I+  LC  G   K   LFK +    
Sbjct: 386 ILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDIIVDSLCKLGEVEKAMILFKEM---- 441

Query: 424 KDHR---------------CFE--VSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGM 296
           KD +               CF+  + + L+ + +E+K+         ++ L  ++A +G 
Sbjct: 442 KDRQIVPDVVNYTTMICGYCFQGKLGDALD-LFKEMKEMGHKPDTITYNILAGAFAQYGA 500

Query: 295 FDEAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGI 116
             +A D L   KRH + P  ++ N +I  L   G+V+ A A    LK   L      Y  
Sbjct: 501 VQKAFDLLNYMKRHGLEPNFVTHNMIIEGLCMGGRVEEAEAFLDGLKGKCLE----NYSA 556

Query: 115 MIKAYCRKQNFEEAAEMFLEMDEAGVV 35
           MI  YC+  + +EA ++F+ +   GV+
Sbjct: 557 MINGYCKTGHTKEAFQLFMRLSNQGVL 583


>gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus vulgaris]
          Length = 803

 Score =  185 bits (470), Expect = 2e-44
 Identities = 95/203 (46%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           V++ L  +   P+ AL F N L   GF H + +Y AI KIL  W L RKLDSLF  +I  
Sbjct: 57  VLQTLHRLHHLPVLALSFLNHLHRTGFPHTLSTYAAITKILAFWNLPRKLDSLFHDLITL 116

Query: 427 KKDHRC-FEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHR 251
            K HR  F   +L E + +++ D     L+RAFD  +K+     MFDEAID LF+T+R  
Sbjct: 117 SKHHRLPFHPLQLFETLFQDM-DHHNLYLLRAFDGFVKTCVGLNMFDEAIDFLFQTRRRG 175

Query: 250 VGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAA 71
           + P +L+CNFL NRLV HG+VD A+AIY+QLK  G  PN YTY I+IKA C+K +  +  
Sbjct: 176 IVPDVLTCNFLFNRLVEHGEVDKALAIYEQLKRFGFRPNCYTYTIVIKALCKKGDLMQPV 235

Query: 70  EMFLEMDEAGVVPNAYPYTAYLE 2
            +F EM+  G+ PN+Y Y AY+E
Sbjct: 236 CVFEEMERVGITPNSYCYAAYIE 258


>ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citrus clementina]
           gi|557531495|gb|ESR42678.1| hypothetical protein
           CICLE_v10011094mg [Citrus clementina]
          Length = 810

 Score =  184 bits (467), Expect = 4e-44
 Identities = 106/275 (38%), Positives = 159/275 (57%)
 Frame = -3

Query: 826 MLVSTIRSVSHKKLFKNLQFVRLQSVPSHAHFTPYFSDSGSEDLSPDSRNNVIATXXXXX 647
           M V   +    ++  K++Q +  +SV + AH     SDS  E+   ++ +N         
Sbjct: 1   MWVLAAKLFPFRQYIKHVQLIPSRSVSALAHLRLICSDSELEESGVNNEHN--------D 52

Query: 646 XXXXXXXXXXXSGVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLD 467
                        VVE L ++++EP  AL FF QLK  GF H++ +Y AI++ILC  G  
Sbjct: 53  EIKCSFSYLNTREVVEKLYSLRKEPKIALSFFEQLKRSGFSHNLCTYAAIVRILCCCGWQ 112

Query: 466 RKLDSLFKGIINSKKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDE 287
           +KL+S+   ++  K D   FE ++L+EA+  E      + L R  D +IK+Y + GMFDE
Sbjct: 113 KKLESMLLELVRKKTDAN-FEATDLIEALCGE----GSTLLTRLSDAMIKAYVSVGMFDE 167

Query: 286 AIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIK 107
            ID LF+  R      + SCN+ +N+LV  GKVD A+A+Y+ LK +GLS N YTY I+IK
Sbjct: 168 VIDILFQINRRGFVWSICSCNYFMNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIK 227

Query: 106 AYCRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
           A C+K + +EA E+FLEM++AGV PNA+ Y+  +E
Sbjct: 228 ALCKKGSMQEAVEVFLEMEKAGVTPNAFAYSTCIE 262



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
 Frame = -3

Query: 598 ILKNMQREPIS--ALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSK 425
           ILK + R  ++  A+  F + K+ GF  D   Y  I+  LC  G   K   LF+ +    
Sbjct: 365 ILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDVIVDSLCKLGEVEKAMILFEEM---- 420

Query: 424 KDHR---------------CFE--VSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGM 296
           KD +               CF+  + + L+ + +E+K+      +  ++ L  ++A +G 
Sbjct: 421 KDRQIVPDVVNYTTMICGYCFQGKLGDALD-LFKEMKEMGHKPDIITYNILAGAFAQYGA 479

Query: 295 FDEAIDTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGI 116
             +A D L   KRH + P  ++ N +I  L   G+V+ A A    LK   L      Y  
Sbjct: 480 VQKAFDLLNYMKRHGLEPNFVTHNMIIEGLCMGGRVEEAEAFLDGLKGKCLE----NYSA 535

Query: 115 MIKAYCRKQNFEEAAEMFLEMDEAGVV 35
           MI  YC+  + +EA ++F+ +   GV+
Sbjct: 536 MINGYCKTGHTKEAFQLFMRLSNQGVL 562


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 795

 Score =  183 bits (465), Expect = 6e-44
 Identities = 89/202 (44%), Positives = 136/202 (67%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           VV++L++++REP  A  FF +L+E+GFQH+I +Y A+I+ILC WGL RKL++LF  +I S
Sbjct: 62  VVQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLIGS 121

Query: 427 KKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRV 248
           KK    F+V +L+E++ +    D  +S +R +D LIK+Y +  +FD  +D LF   R   
Sbjct: 122 KKVE--FDVLDLIESLNQGCVVD--ASFIRVYDALIKAYVSVNLFDSVVDLLFRLGRKGF 177

Query: 247 GPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAE 68
            P + +CN+L+NRL+ HGK++ A+ +Y+QLK  G  PN YTY  +IK  C+    E+A +
Sbjct: 178 VPHIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYATVIKGLCKIGKMEKAID 237

Query: 67  MFLEMDEAGVVPNAYPYTAYLE 2
           +F EM   G+VPNA+   AY+E
Sbjct: 238 IFEEMSGYGMVPNAFACAAYIE 259


>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 920

 Score =  183 bits (465), Expect = 6e-44
 Identities = 89/202 (44%), Positives = 136/202 (67%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           VV++L++++REP  A  FF +L+E+GFQH+I +Y A+I+ILC WGL RKL++LF  +I S
Sbjct: 62  VVQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLIGS 121

Query: 427 KKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRV 248
           KK    F+V +L+E++ +    D  +S +R +D LIK+Y +  +FD  +D LF   R   
Sbjct: 122 KKVE--FDVLDLIESLNQGCVVD--ASFIRVYDALIKAYVSVNLFDSVVDLLFRLGRKGF 177

Query: 247 GPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAE 68
            P + +CN+L+NRL+ HGK++ A+ +Y+QLK  G  PN YTY  +IK  C+    E+A +
Sbjct: 178 VPHIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYATVIKGLCKIGKMEKAID 237

Query: 67  MFLEMDEAGVVPNAYPYTAYLE 2
           +F EM   G+VPNA+   AY+E
Sbjct: 238 IFEEMSGYGMVPNAFACAAYIE 259


>ref|XP_002305039.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848003|gb|EEE85550.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 800

 Score =  183 bits (464), Expect = 8e-44
 Identities = 93/213 (43%), Positives = 136/213 (63%), Gaps = 11/213 (5%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           +V+ L N++ +P  A   F+ LK      DI +Y AII+ILC WGL + L S+F  +  +
Sbjct: 69  IVDTLYNLKNQPHLAFSIFSHLKNP----DIPAYAAIIRILCHWGLHKMLHSIFLHLHQN 124

Query: 427 KKDHRCFEVSELLEAIA-----------EELKDDEQSSLVRAFDTLIKSYATFGMFDEAI 281
             D   F++S LL+ ++           E+      S L++ +D L+KSY T GM DEAI
Sbjct: 125 NNDFTSFDISHLLDTLSLPHHIDIDLEKEDTVKHRSSFLIQVYDALVKSYVTAGMLDEAI 184

Query: 280 DTLFETKRHRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAY 101
           + LF+ KR    P + + N+L+N+L+ +GKVD A+AIYKQLK++GL+PN YTY I+IKA+
Sbjct: 185 NALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAF 244

Query: 100 CRKQNFEEAAEMFLEMDEAGVVPNAYPYTAYLE 2
           CRK +  EA+ +F EM+  GV+PNAY YT Y+E
Sbjct: 245 CRKGSLVEASNVFQEMELCGVIPNAYAYTTYIE 277



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 16/204 (7%)
 Frame = -3

Query: 565 ALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCF--EVS-- 398
           AL   N ++ KG + +      I++  C  G+  ++   FK      KD R F  EVS  
Sbjct: 358 ALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRF----KDLRIFLDEVSYN 413

Query: 397 ------------ELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRH 254
                       +   A+ +E+K  +    +  + TLI  Y   G   +A     E +  
Sbjct: 414 IVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGK 473

Query: 253 RVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEA 74
            + P +++ N L+      G  + A+ +Y+ +K+  L PN  T+ +MI+  C      EA
Sbjct: 474 GLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEA 533

Query: 73  AEMFLEMDEAGVVPNAYPYTAYLE 2
              F  M++  +       T Y E
Sbjct: 534 EAFFCNMEDKSIDNYGAMITGYCE 557


>ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 801

 Score =  179 bits (453), Expect = 2e-42
 Identities = 88/204 (43%), Positives = 131/204 (64%), Gaps = 2/204 (0%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           V++ L ++   P  AL FF  L+  GF H I +Y AIIKIL  W L R+LD+LF  +IN 
Sbjct: 52  VLQTLHHLHNNPSHALSFFTHLRHTGFSHTISTYAAIIKILSFWNLQRQLDTLFLHLINR 111

Query: 427 KKDHRCFEVSELLEAIAEELKDDEQSS--LVRAFDTLIKSYATFGMFDEAIDTLFETKRH 254
                 F +  L E + ++     +++  L+RAF+  +K+  +  MFD+AID LF+T+R 
Sbjct: 112 DHPPLPFPLLNLFETLFQDFNTSHKNNYFLLRAFNGFVKTCVSLNMFDKAIDFLFQTRRR 171

Query: 253 RVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEA 74
            + P +L+CNFL NRLV HG+VD A+A+Y+QLK  G  PN YTY I+IKA C+K + ++ 
Sbjct: 172 GILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQP 231

Query: 73  AEMFLEMDEAGVVPNAYPYTAYLE 2
             +F EM+  GV+P++Y + AY+E
Sbjct: 232 LCVFEEMERVGVIPHSYCFAAYIE 255


>ref|XP_004491840.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X1 [Cicer arietinum]
           gi|502101204|ref|XP_004491841.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X2 [Cicer arietinum]
           gi|502101208|ref|XP_004491842.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X3 [Cicer arietinum]
           gi|502101212|ref|XP_004491843.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X4 [Cicer arietinum]
           gi|502101216|ref|XP_004491844.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X5 [Cicer arietinum]
           gi|502101220|ref|XP_004491845.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X6 [Cicer arietinum]
           gi|502101225|ref|XP_004491846.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like isoform X7 [Cicer arietinum]
          Length = 694

 Score =  178 bits (452), Expect = 2e-42
 Identities = 90/202 (44%), Positives = 133/202 (65%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINS 428
           V++ L  ++  P  AL +F QL ++GF ++I +Y AII+I+C WG  RKLDSLF  +I  
Sbjct: 66  VLQKLYFLRNNPSQALSYFTQLNQQGFSYNISTYAAIIRIMCYWGWLRKLDSLFLDVIAH 125

Query: 427 KKDHRCFEVSELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRV 248
            K    F++ EL +++ E +  ++   L+RAFD  +K+  +  MFDEAI+ L  T+R  +
Sbjct: 126 SKQDPSFKIHELFDSLFEGVDVNQNHYLLRAFDGFVKACVSLNMFDEAIEFLLHTRRSVI 185

Query: 247 GPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAE 68
            P +L+ NFLINRLV H ++DTA+ +Y+Q K +GL PN YTY I+IKA+CRK + E A  
Sbjct: 186 LPNVLTFNFLINRLVIHDEIDTALFVYEQFKRLGLIPNHYTYAIIIKAHCRKGDLENAFR 245

Query: 67  MFLEMDEAGVVPNAYPYTAYLE 2
           +F EM E GV P++Y  T  +E
Sbjct: 246 VFDEMKEVGVNPDSYCNTTLIE 267


>ref|XP_002880834.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326673|gb|EFH57093.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 797

 Score =  164 bits (414), Expect = 5e-38
 Identities = 87/205 (42%), Positives = 127/205 (61%), Gaps = 2/205 (0%)
 Frame = -3

Query: 610 GVVEILKNMQREPISALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIIN 431
           G+  +L + + +P  AL F  QLKE     ++ +Y  +++IL  WGLDRKLDS+   +I 
Sbjct: 56  GLQRLLNSTRDDPNQALSFLRQLKEHDVSPNVNAYATLVRILTSWGLDRKLDSVLVELI- 114

Query: 430 SKKDHRCFEVSELLEAIAEELKDDEQSSLV--RAFDTLIKSYATFGMFDEAIDTLFETKR 257
            K + R F V +L+E I EE  +++Q SLV  R    L+K+Y   GMFDEAID LF++KR
Sbjct: 115 -KNEERGFSVMDLIEVIGEEEAEEDQRSLVLIRVSGALVKAYVGLGMFDEAIDVLFQSKR 173

Query: 256 HRVGPCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEE 77
               P + +CNFL+NRL+  GK+   VA++KQLK +GL  N YTY I++KA CRK + E 
Sbjct: 174 LDCVPDIKACNFLMNRLIEFGKIGMVVALFKQLKQLGLCANEYTYAIVVKALCRKGDLEG 233

Query: 76  AAEMFLEMDEAGVVPNAYPYTAYLE 2
           AA + LE       P+ + Y  +++
Sbjct: 234 AAMLLLES------PSVFSYKTFID 252



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
 Frame = -3

Query: 565 ALIFFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGI--INSKKDHRCFEVS-- 398
           AL F +++  KG + +     +I++  C   +  +    FK    +N   D  C+ V+  
Sbjct: 336 ALGFLDKMLGKGLKINCVIVSSILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFD 395

Query: 397 ---------ELLEAIAEELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHRVG 245
                    E +E + +E+KD      V  + TLI  Y   G   +A+D + E   +   
Sbjct: 396 ALSKLGRVEEAIELL-QEMKDKGIVPDVINYTTLIDGYCLKGKVVDALDLIDEMIGNGTS 454

Query: 244 PCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEM 65
           P L++ N L++ L  +G  +  + IY+++K  GL PN  T  ++I+  C  +  +EA + 
Sbjct: 455 PDLITYNVLVSGLARNGHEEAVLEIYERMKAEGLKPNAVTDNVIIEGLCFARKVKEAEDF 514

Query: 64  FLEMDE 47
           F+ +++
Sbjct: 515 FMSLEQ 520


>ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496307|gb|AES77510.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 738

 Score =  161 bits (407), Expect = 3e-37
 Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 3/205 (1%)
 Frame = -3

Query: 607 VVEILKNMQREPISALIFFNQLKEK-GFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIIN 431
           +++ L   Q  P  A  +F QLK + GF H+IQ+Y +II+ILC + LDRKLDSLF  II+
Sbjct: 64  ILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIID 123

Query: 430 SKKDHRCFEVSELLEAIAEELKD-DEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRH 254
             K   CFE++ L +++ E + D +E   L  AF+  +K+  +  MF EAID L +T+++
Sbjct: 124 HSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAIDFLLQTRKN 183

Query: 253 RVG-PCLLSCNFLINRLVGHGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEE 77
            V  P +LS NFLINRLV H +VD A+ ++ + K+ GL  N YTY I+IKA C+K ++E 
Sbjct: 184 VVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWEN 243

Query: 76  AAEMFLEMDEAGVVPNAYPYTAYLE 2
              +F EM EAGV  ++Y Y  ++E
Sbjct: 244 VVRVFDEMKEAGVDDDSYCYATFIE 268



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556  FFNQLKEKGFQHDIQSYVAIIKILCLWGLDRKLDSLFKGIINSKKDHRCFEVSELLEAIA 377
            FFN LK +  +  ++ Y A++   C   L              +K H   E   LL  + 
Sbjct: 527  FFNWLKGESVEISVEIYTALVNGYCEAAL-------------IEKSHELKEAFILLRTML 573

Query: 376  EELKDDEQSSLVRAFDTLIKSYATFGMFDEAIDTLFETKRHR-VGPCLLSCNFLINRLVG 200
            E      +    + F  L  +        E   TLF    H    P  ++   +IN    
Sbjct: 574  EMNMKPSKVMYSKIFTALCCNGNM-----EGAHTLFNLFIHTGFTPDAVTYTIMINGYCK 628

Query: 199  HGKVDTAVAIYKQLKTIGLSPNVYTYGIMIKAYCRKQNFEEAAEMFLEMDEAGVVPNAYP 20
               +  A  ++K +K  G++P+  TY IMI  YC+     EA E+F +M E G+ P+   
Sbjct: 629  TNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIA 688

Query: 19   YTAYLE 2
            YT  ++
Sbjct: 689  YTVIIK 694