BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025143
         (469 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr...   153   2e-35
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein...   135   6e-30
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe...   131   1e-28
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
ref|XP_002305605.1| pentatricopeptide repeat-containing family p...   125   4e-27
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps...   116   3e-24
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   114   1e-23
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   113   2e-23
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr...   105   8e-21
ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [A...    92   7e-17
ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [A...    87   3e-15
ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat...    70   3e-10
ref|XP_003620276.1| Pentatricopeptide repeat-containing protein ...    67   2e-09
ref|XP_006341056.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_002521455.1| pentatricopeptide repeat-containing protein,...    65   7e-09
ref|XP_004956288.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
gb|EMJ09562.1| hypothetical protein PRUPE_ppa001204mg [Prunus pe...    65   1e-08

>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
           gi|557551699|gb|ESR62328.1| hypothetical protein
           CICLE_v10018367mg [Citrus clementina]
          Length = 578

 Score =  153 bits (387), Expect = 2e-35
 Identities = 78/155 (50%), Positives = 108/155 (69%)
 Frame = +2

Query: 5   FKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLC 184
           FK+A DEKIELQ  TY  ML+AL S++GR+++ I++Y+++ E+ I V D+ Y   V VLC
Sbjct: 346 FKRACDEKIELQDDTYGCMLKAL-SKEGRVKEVIQIYHLISERGITVKDSDYYAFVNVLC 404

Query: 185 KENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDST 364
           KE+  ++V  LL D + RG+I  A ELS +V  QC +G+W+E EEL   ++DQG LLDS 
Sbjct: 405 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDQGLLLDSF 464

Query: 365 SCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDTA 469
            C   ++ YCS R+I KAI LH K+E LKG+LD A
Sbjct: 465 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 499


>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Citrus sinensis]
          Length = 538

 Score =  153 bits (386), Expect = 3e-35
 Identities = 78/155 (50%), Positives = 109/155 (70%)
 Frame = +2

Query: 5   FKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLC 184
           FK+A DEKIELQ  TY  ML+AL S++GR+++AI++Y+++ E+ I V D+ Y   V VLC
Sbjct: 306 FKRACDEKIELQDDTYGCMLKAL-SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 364

Query: 185 KENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDST 364
           KE+  ++V  LL D + RG+I  A ELS +V  QC +G+W+E EEL   ++D+G LLDS 
Sbjct: 365 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 424

Query: 365 SCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDTA 469
            C   ++ YCS R+I KAI LH K+E LKG+LD A
Sbjct: 425 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 459


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/156 (44%), Positives = 104/156 (66%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVL 181
           FFK+A +EKIEL + TY  MLRAL  + GR+++AI +Y V+ E  + V D CY+  V VL
Sbjct: 336 FFKRARNEKIELDNATYGCMLRALAKD-GRVKEAIGVYLVILESGVTVKDGCYHAFVNVL 394

Query: 182 CKENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDS 361
           C+E+PSQ+VS L+ + I +GF     +LS ++   C  GRW EA++L ++ +++G L DS
Sbjct: 395 CEEDPSQEVSKLMGEIIGKGFSPCGSKLSKFITSLCKNGRWTEADDLLNVTIEKGLLPDS 454

Query: 362 TSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDTA 469
             C   V+ YC  R+I  +I LH+K++ +KG+LD A
Sbjct: 455 FCCSALVEHYCRSRQIDSSIALHEKIKKVKGSLDVA 490


>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 578

 Score =  135 bits (340), Expect = 6e-30
 Identities = 67/153 (43%), Positives = 104/153 (67%)
 Frame = +2

Query: 5   FKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLC 184
           FKKA DE I L++ TY  ML+AL S++ R+++AIE+  ++ ++ I V+++CY+  +  LC
Sbjct: 346 FKKACDENIRLRNDTYGSMLKAL-SQEARIDEAIEVCRMILKRRIIVNESCYSAFINALC 404

Query: 185 KENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDST 364
           KE+ S     LLVD I+RG    A +LS Y++ QC++  WR+AEEL DL++++G L DS 
Sbjct: 405 KEDQSDDGYELLVDIIKRGHNPCASKLSKYISSQCSQMNWRKAEELLDLMLEKGLLPDSF 464

Query: 365 SCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
            C   ++ YC  R++ K + LHDK+E +KG LD
Sbjct: 465 GCCLLIQYYCFNRQVDKIVALHDKMEKVKGCLD 497


>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like isoform X1 [Solanum tuberosum]
           gi|565362693|ref|XP_006348080.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X2 [Solanum tuberosum]
           gi|565362695|ref|XP_006348081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X3 [Solanum tuberosum]
          Length = 584

 Score =  134 bits (337), Expect = 1e-29
 Identities = 68/154 (44%), Positives = 102/154 (66%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVL 181
           FF++A++++I+LQ  TY  MLRA  S++G+ EDAI +YN++ E+ I +SD CY+  + VL
Sbjct: 351 FFREAYEKRIKLQDNTYGSMLRAF-SKEGKAEDAIWMYNIIVERKIFISDKCYSAFMSVL 409

Query: 182 CKENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDS 361
           C ENPS +VS+LL D I RGF+    ++S ++  QC + +W+EAEEL ++I  +    +S
Sbjct: 410 CNENPSLEVSSLLKDLIGRGFVPPVSQVSKFIVSQCEKRQWKEAEELLNVIFQRRLQFES 469

Query: 362 TSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
             C   V+ YC  R I  AI+LH +LE L   LD
Sbjct: 470 FCCCSLVRHYCFSRRIDSAISLHTELERLGVALD 503


>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
          Length = 584

 Score =  131 bits (329), Expect = 1e-28
 Identities = 72/154 (46%), Positives = 97/154 (62%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVL 181
           FFKKA DEKI LQ  TY  ML+AL +E  R ++AI +Y ++ E+ I V  + Y+    VL
Sbjct: 335 FFKKACDEKIGLQDGTYGLMLKALTNEV-RTKEAISVYRLISERGIVVDGSSYHAFADVL 393

Query: 182 CKENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDS 361
           CKE   ++   LL+D I RG    A ELS +++  C  GRWREAE L ++++D+G L D 
Sbjct: 394 CKEERYEEGFELLMDVISRGCSPSASELSCFISFLCRRGRWREAEYLLNVVLDKGLLPDL 453

Query: 362 TSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
             C   V RYCS R+I  AI LH+K+E L G+LD
Sbjct: 454 ICCSPLVGRYCSGRQIDSAIALHNKMEKLNGSLD 487


>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Solanum lycopersicum]
          Length = 584

 Score =  129 bits (324), Expect = 4e-28
 Identities = 66/154 (42%), Positives = 100/154 (64%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVL 181
           FF++A+++ I+LQ  TY  MLRA  S++G+ EDAI +YN++ E+ I ++  CY+  + VL
Sbjct: 351 FFREAYEKSIKLQDKTYGSMLRAF-SKEGKAEDAIWMYNIIVERKIFINGKCYSAFMSVL 409

Query: 182 CKENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDS 361
           C E PS +VS+LL D I RGF+    ++S ++  QC + +W+EAEEL ++I  +G   +S
Sbjct: 410 CNEIPSVEVSSLLKDLIGRGFVPPVSQVSKFIVSQCEKHQWKEAEELLNVIFQKGLQFES 469

Query: 362 TSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
             C   V+ YC  R I  AI+LH +LE L   LD
Sbjct: 470 FCCCSLVRHYCFSRRIDSAISLHTELERLGVALD 503


>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848569|gb|EEE86116.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 564

 Score =  125 bits (315), Expect = 4e-27
 Identities = 67/156 (42%), Positives = 103/156 (66%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVL 181
           FF++A DEKI LQ  TY  ML+AL S++ R+++AI LY+++ EK I V D+ Y+  + +L
Sbjct: 330 FFRRACDEKIGLQDATYGCMLKAL-SKEARVKEAIGLYSLISEKGIRVKDSTYHAFLDLL 388

Query: 182 CKENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDS 361
            +E+  ++   +L D +RRGF      LS ++     + RWRE E+L DL++++G L DS
Sbjct: 389 SEEDQYEEGYEILGDMMRRGFRPGTVGLSKFILLLSRKRRWREVEDLLDLVLEKGLLPDS 448

Query: 362 TSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDTA 469
             C   V+ YCSRR+I KA+ LH+K+E L+ +LD A
Sbjct: 449 LCCCSLVEHYCSRRQIDKAVALHNKMEKLQASLDVA 484


>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
           gi|482553811|gb|EOA18004.1| hypothetical protein
           CARUB_v10006439mg [Capsella rubella]
          Length = 585

 Score =  116 bits (290), Expect = 3e-24
 Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSD-NCYNELVIV 178
           F K  + E + L+  TY  ML+AL S KGR ++A+++Y ++  K I V D +CY E    
Sbjct: 348 FRKACNGETVRLRDGTYGCMLKAL-SRKGRTKEAVDVYRLICRKGITVLDESCYTEFANA 406

Query: 179 LCKE-NPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLL 355
           LC++ N  ++   LLVD I+RGF+   + LS  +   C + RWR AE+L D +M+     
Sbjct: 407 LCRDDNSPEEELELLVDVIKRGFVPCTRRLSEVLASLCRKRRWRHAEKLLDSVMEMEVYF 466

Query: 356 DSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
           DS SCG  ++RYC   ++ KA+ LH++++ +KG+LD
Sbjct: 467 DSFSCGILMERYCRSGKLDKAMELHERIKKMKGSLD 502


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  114 bits (285), Expect = 1e-23
 Identities = 63/154 (40%), Positives = 95/154 (61%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVL 181
           FFK+A DE+I LQ  TY  MLRA  S +G LE+AI LY V+ E+ + + DN  +  V +L
Sbjct: 359 FFKRACDERIGLQDATYGRMLRAF-SIEGILEEAIGLYQVILERGLTIKDNASDAFVDLL 417

Query: 182 CKENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDS 361
            +++   +   ++ D +RRGF      LS Y+   C + RW+EAEEL  +++++G L D+
Sbjct: 418 SEKDQYAEGYEIVRDIMRRGFSPCTSSLSKYITLLCKKRRWKEAEELLYMVLEKGLLPDT 477

Query: 362 TSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
            S    VK YCS ++  KA+ LH+ LE L+ +LD
Sbjct: 478 LSFCSLVKHYCSSKQTDKALALHNTLEKLQASLD 511


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  113 bits (283), Expect = 2e-23
 Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSD-NCYNELVIV 178
           F K  + E + L   TY  ML+AL S K R ++A+++Y ++  K I V D +CY E    
Sbjct: 348 FRKACNGETVRLWDSTYGCMLKAL-SRKKRTKEAVDVYRMICRKGITVLDESCYIEFANA 406

Query: 179 LCKE-NPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLL 355
           LC++ N S++   LLVD I+RGF+    +LS  +   C + RW+ AE+L D +M+     
Sbjct: 407 LCRDDNSSEEEEELLVDVIKRGFVPCTHKLSEVLASMCRKRRWKSAEKLLDSVMEMEVYF 466

Query: 356 DSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
           DS +CG  ++RYC   ++ KA+ LH+K++ +KG+LD
Sbjct: 467 DSFACGLLMERYCRSGKLEKALVLHEKIKKMKGSLD 502


>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
           gi|557114982|gb|ESQ55265.1| hypothetical protein
           EUTSA_v10024760mg [Eutrema salsugineum]
          Length = 584

 Score =  105 bits (261), Expect = 8e-21
 Identities = 55/142 (38%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
 Frame = +2

Query: 47  TYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSD-NCYNELVIVLCKE--NPSQKVSNL 217
           TY  ML++L S  GR ++A+++Y ++  K I V D +CY E    LC++  N S++   L
Sbjct: 361 TYGCMLKSL-SVIGRTKEAVDVYRLICRKGITVLDESCYKEFANALCRDDDNSSEEEGEL 419

Query: 218 LVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCS 397
           L+D I+RGF+    +LS  +   C + RW  AE+L D +M+     DS SCG  ++RYC 
Sbjct: 420 LIDVIKRGFVPCTLKLSEVLASLCRKRRWNRAEKLLDSVMEMEVHFDSFSCGLLMERYCR 479

Query: 398 RREIGKAITLHDKLEDLKGTLD 463
             ++ KA+ LH+K++ +KG+LD
Sbjct: 480 SGKLEKAMVLHEKIKKMKGSLD 501


>ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [Amborella trichopoda]
           gi|548861770|gb|ERN19141.1| hypothetical protein
           AMTR_s00061p00160470 [Amborella trichopoda]
          Length = 372

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 45/153 (29%), Positives = 95/153 (62%)
 Frame = +2

Query: 5   FKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLC 184
           F  AH+  + LQ+ +Y  +L+    +K R+++A+ +Y ++ +++I ++    N L+  L 
Sbjct: 140 FGIAHNALVFLQNASYIALLKGFSRDK-RIKEAVRMYFLLLQRDIALNICECNVLLNALF 198

Query: 185 KENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDST 364
           KE  S++V+ ++   IR+GF  +   +S++++ QC++G W+EA EL  +++++G + +  
Sbjct: 199 KEEQSEEVNKVIKSVIRKGFYPDPLAISSHISSQCSKGGWQEANELLWVMLERGVMPNGF 258

Query: 365 SCGYFVKRYCSRREIGKAITLHDKLEDLKGTLD 463
           +CG F++ YC    +  A++LH+KL  L   L+
Sbjct: 259 ACGSFIRHYCEDGGLDYALSLHEKLVKLGNVLN 291


>ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [Amborella trichopoda]
           gi|548830797|gb|ERM93720.1| hypothetical protein
           AMTR_s00004p00243870 [Amborella trichopoda]
          Length = 359

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 42/144 (29%), Positives = 87/144 (60%)
 Frame = +2

Query: 5   FKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLC 184
           F  A    + LQ+  Y  +L+A   ++ R+++A+ +Y ++ +++I ++ +  N L+  L 
Sbjct: 127 FGIARSALVPLQNACYIALLKAFSRDR-RIKEAVRMYFLLLQRDIAMNISECNVLLNALF 185

Query: 185 KENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDST 364
           KE PS++V+ ++   I +GF  +   +S+Y++ QC++G W+EA EL  + +++G + D  
Sbjct: 186 KEEPSEEVNKVIKSVIEKGFYPDPLAISSYISAQCSKGGWQEANELLWVTLERGVMPDGF 245

Query: 365 SCGYFVKRYCSRREIGKAITLHDK 436
             G F++ YC    +  A++LH+K
Sbjct: 246 VWGSFIRHYCEDGHLDYALSLHEK 269


>ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 563

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/141 (29%), Positives = 77/141 (54%)
 Frame = +2

Query: 44  ITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLCKENPSQKVSNLLV 223
           +TY  +++ + +  G+ E+A +L   M  +NI  +   Y+ LV  LCKE    + ++++ 
Sbjct: 127 VTYTSLIQGVCNT-GQFEEATKLLYEMASRNIYPNVVTYSVLVDGLCKEGKVVEANSVVE 185

Query: 224 DTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRR 403
             IR+     A   S+ ++  C  G   EA ++FDL++ +GC++D  SC   +  YC  +
Sbjct: 186 IMIRKDIEPNAITYSSLMDGYCLRGEMGEARKIFDLMLRKGCMVDVWSCTILINGYCKHK 245

Query: 404 EIGKAITLHDKLEDLKGTLDT 466
           +I +AI L +++  L+   DT
Sbjct: 246 KIDQAIELFEEMLRLELVPDT 266


>ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495291|gb|AES76494.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 590

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/147 (26%), Positives = 74/147 (50%)
 Frame = +2

Query: 5   FKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLC 184
           FK+ H + I    +TY  ++  L S+ GR+  A++L + MH++ +P +   YN ++  LC
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGL-SKSGRISYALQLVDQMHDRGVPPNICTYNSILDALC 446

Query: 185 KENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDST 364
           K +   K   LL     +GF  +    S  +   C  G+  +A ++F+ ++ +G  LD  
Sbjct: 447 KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVY 506

Query: 365 SCGYFVKRYCSRREIGKAITLHDKLED 445
           +    ++ +C      +A+ L  K+ED
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMED 533


>ref|XP_006341056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Solanum tuberosum]
          Length = 766

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/132 (27%), Positives = 67/132 (50%)
 Frame = +2

Query: 47  TYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLCKENPSQKVSNLLVD 226
           TY  ++  L  E G +++A+EL N M  ++   +   YN ++  LCKEN  Q+ +     
Sbjct: 346 TYNILISGLC-EVGEVQEAMELLNQMLVRDCTPNTITYNTIISALCKENQVQEATEFARV 404

Query: 227 TIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRRE 406
              +GF+ +    ++ +   C  G +  A E+F+ + D+GC  D  +    +   C++R 
Sbjct: 405 LTSKGFLPDVCTFNSLIQGLCFTGSFNVAMEMFEEMKDKGCQPDEFTYNILIDCLCAKRR 464

Query: 407 IGKAITLHDKLE 442
           IG+A+ L   +E
Sbjct: 465 IGEALNLLKDME 476


>ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539354|gb|EEF40945.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 40/147 (27%), Positives = 67/147 (45%)
 Frame = +2

Query: 2   FFKKAHDEKIELQHITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVL 181
           F ++  +E  E   +TY  ++ +    KGRL+DA  LY +M+ +N+      Y  L+  L
Sbjct: 271 FLERMEEEGFEPDIVTYNTLI-SCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGL 329

Query: 182 CKENPSQKVSNLLVDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDS 361
           CKE   ++   L    I RG   +    +  +   C EG+ RE+  L   ++  G   D 
Sbjct: 330 CKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDK 389

Query: 362 TSCGYFVKRYCSRREIGKAITLHDKLE 442
            +C   ++ Y     I  A+ L  +LE
Sbjct: 390 VTCQVLIEGYRKEARIVSALNLVVELE 416


>ref|XP_004956288.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Setaria italica]
          Length = 799

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/136 (30%), Positives = 65/136 (47%)
 Frame = +2

Query: 50  YEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLCKENPSQKVSNLLVDT 229
           Y  +LR L++  G +  A+ LYN M    +P +   YN L+  LCK   +     L  + 
Sbjct: 178 YNAVLRVLVNS-GVVPAALALYNRMLATGLPPNRATYNVLMDGLCKRGTAADALKLFDEM 236

Query: 230 IRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREI 409
           I RG + + K  +  ++  C  G  +EAE L   + DQGC  D  +   F+   C    +
Sbjct: 237 ISRGIVPDVKTHTVLLSSMCNAGHLKEAENLLHSMKDQGCPPDEVTYNAFLSGLCKAGRV 296

Query: 410 GKAITLHDKLEDLKGT 457
            +AI    +LE L+GT
Sbjct: 297 DEAI---QQLEPLRGT 309


>gb|EMJ09562.1| hypothetical protein PRUPE_ppa001204mg [Prunus persica]
          Length = 881

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/133 (30%), Positives = 68/133 (51%)
 Frame = +2

Query: 41   HITYEYMLRALLSEKGRLEDAIELYNVMHEKNIPVSDNCYNELVIVLCKENPSQKVSNLL 220
            H+TY   L  L S++G +E AI+L+N M  + +  +   YN L+   CK    Q+ S+LL
Sbjct: 720  HVTYGCFLDHL-SKEGSMEKAIQLHNAMLAR-LSANTVTYNILIRGFCKMGKFQEASDLL 777

Query: 221  VDTIRRGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSR 400
            V+    G   +    S ++ + C  G   EA +L+D+++D+G   D  +  + +   C  
Sbjct: 778  VEMTANGVYPDCITYSTFIFEHCRSGNLLEAIKLWDVMLDRGLKPDILAYNFLIYGCCVT 837

Query: 401  REIGKAITLHDKL 439
             E+ KA  L D +
Sbjct: 838  GELAKAFELRDDM 850