BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025122
         (469 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus pe...    73   3e-11
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...    67   2e-09
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...    67   3e-09
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...    65   7e-09
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...    64   2e-08
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]    64   2e-08
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...    64   3e-08
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...    55   1e-05

>gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 55/158 (34%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
 Frame = +1

Query: 1   FQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDFTPHKNPHKRFNLLPKNKNS 180
           FQSS SK H    + LFR  SS    K    A H++ +S   P +NP ++ N + KN+  
Sbjct: 18  FQSSFSKFH-GPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPEQNPLRKSNFVRKNQ-P 75

Query: 181 ICNYASEPPNSQKSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNYR-----NLGDVXX 345
           I  Y        K N     S +SW+D W  + K N  K P+AV++Y+     NL     
Sbjct: 76  ISQY------KPKKN----FSSSSWIDKWNESHKHNRPKPPRAVLDYQSSESGNLSGSGY 125

Query: 346 XXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNEN 459
                            +IVEKLKKFGY+D   D NEN
Sbjct: 126 AEGDGGGGRNSSGSTMEKIVEKLKKFGYVD---DSNEN 160


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 55/170 (32%), Positives = 68/170 (40%), Gaps = 25/170 (14%)
 Frame = +1

Query: 34  TALQLFRYSSSFSTNKQFLCAIHHSSNSD--------------FTPH----------KNP 141
           T L  FRYSSS    K    A H   N D               TPH          + P
Sbjct: 14  TRLSFFRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPSKRSNFVVTPHDVVNKDCIFKRTP 73

Query: 142 HKRFNLLPKNKNSICNYASEPPNSQKSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNY 321
            KR N + KN +   N  +  PN +  +  T +  +SWL  W  T      KK Q V+NY
Sbjct: 74  LKRSNFVVKNSSRRWNLDTISPNLKSRDSGTSVFSSSWLGKWNETRNDIKLKKAQIVLNY 133

Query: 322 RNL-GDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMSR 468
           RN  GD                    RIVEKLKKFGY D+ ++K +   R
Sbjct: 134 RNSNGDT----SGSDCEESISGSTMDRIVEKLKKFGYADEATEKEKREKR 179


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 53/151 (35%), Positives = 72/151 (47%)
 Frame = +1

Query: 4   QSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDFTPHKNPHKRFNLLPKNKNSI 183
           +SS+SK H  T   LFRYSS     KQ   A  +   S  TP +NP ++ NLL      I
Sbjct: 16  ESSLSKFH-GTHFHLFRYSS-IPFKKQSFHATQYFITSSLTPEQNPPRKLNLL------I 67

Query: 184 CNYASEPPNSQKSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNYRNLGDVXXXXXXXX 363
           C Y  +P  +        LS  SW+D W  + K +  ++P+AV++Y++            
Sbjct: 68  CQY--KPTKN--------LSSCSWIDRWNDSRKQHGPRRPRAVLDYQS-----NESGNLS 112

Query: 364 XXXXXXXXXXXRIVEKLKKFGYIDDVSDKNE 456
                      +IVEKLKKFGYI    DKNE
Sbjct: 113 SDGNDGGSTMDKIVEKLKKFGYI--AEDKNE 141


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 54/170 (31%), Positives = 67/170 (39%), Gaps = 25/170 (14%)
 Frame = +1

Query: 34  TALQLFRYSSSFSTNKQFLCAIHHSSNSD--------------FTPH----------KNP 141
           T L   RYSSS    K    A H   N D               TPH          + P
Sbjct: 14  TRLSFLRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPPKRSNFMITPHDVVNQDCIFRRTP 73

Query: 142 HKRFNLLPKNKNSICNYASEPPNSQKSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNY 321
            KR N + KN +   N  +  PN +  +  T +  +SWL  W  T      KK Q V+NY
Sbjct: 74  SKRSNFVVKNSSRRWNLDTISPNLKSRDSGTSVFSSSWLGKWNGTRNDIKLKKAQIVLNY 133

Query: 322 RNL-GDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMSR 468
           RN  GD                    RIVEKLKKFGY D+ ++K +   R
Sbjct: 134 RNSNGDT----SGSDCEESISGSTMDRIVEKLKKFGYADEATEKEKKEKR 179


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
 Frame = +1

Query: 34  TALQLFRYSSS--FSTNKQFLCAIHHSSNSDFTPHKNPHKRFNLLPKNKNSICNYASEPP 207
           T LQ FRY SS  F T+  ++     +SNS      NP ++ N++  N           P
Sbjct: 23  TRLQFFRYGSSNRFRTHSSYVARNTIASNST-----NPQRKSNIVFTNT----------P 67

Query: 208 NSQKSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNYRNLGDVXXXXXXXXXXXXXXXX 387
            SQ  +G    S  +W+D W    + +  K+ + V+NYRN   V                
Sbjct: 68  VSQYDSGGVSSSGGNWIDKWNGPHQKSHPKESRPVMNYRNSETVSRSDGGSGGGSTME-- 125

Query: 388 XXXRIVEKLKKFGYIDDVSDKNENM 462
              +IVEKLKKFGY+DDV +  EN+
Sbjct: 126 ---KIVEKLKKFGYMDDVKETKENV 147


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
 Frame = +1

Query: 34  TALQLFRYSSS--FSTNKQFLCAIHHSSNSDFTPHKNPHKRFNLLPKNKNSICNYASEPP 207
           T LQ FRY SS  F T+  ++     +SNS      NP ++ N++  N           P
Sbjct: 23  TRLQFFRYGSSNRFRTHSSYVTRNTIASNST-----NPQRKSNIVFTNT----------P 67

Query: 208 NSQKSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNYRNLGDVXXXXXXXXXXXXXXXX 387
            SQ  +G    S  +W+D W    + +  K+ + V+NYRN   V                
Sbjct: 68  VSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRNSETVSRSDGGSGGGSTME-- 125

Query: 388 XXXRIVEKLKKFGYIDDVSDKNENM 462
              +IVEKLKKFGY+DDV +  EN+
Sbjct: 126 ---KIVEKLKKFGYMDDVKETKENV 147


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
           gi|222864769|gb|EEF01900.1| hypothetical protein
           POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 52/156 (33%), Positives = 64/156 (41%)
 Frame = +1

Query: 1   FQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDFTPHKNPHKRFNLLPKNKNS 180
           FQSS SK H  T LQ FRYSSSF           HS  +     KNP  +    P +K+ 
Sbjct: 14  FQSSFSKFH-GTPLQFFRYSSSFPLRS-------HSGYACSITDKNPSTKSTSFPTDKSK 65

Query: 181 ICNYASEPPNSQKSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNYRNLGDVXXXXXXX 360
             N ++                +SW  NW    K N  + PQAV +YR+           
Sbjct: 66  TLNLSTG---------------SSWFFNWNKPNKQNLPRTPQAVFDYRS----------N 100

Query: 361 XXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMSR 468
                       +IVEKLKK GY+D   D NEN  R
Sbjct: 101 NSNSSGSGSTMEKIVEKLKKHGYMD--GDVNENKER 134


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Citrus sinensis]
          Length = 933

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
 Frame = +1

Query: 1   FQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDFTPHKNPHKRFNLLPKNKNS 180
           FQSS SK H  T    FR   S     +F    + + +S+    KNP ++          
Sbjct: 19  FQSSFSKFH-GTHFHFFRCGHSIPLKNRFF---YQNFSSNSAHEKNPPRK---------- 64

Query: 181 ICNYASEPPNSQ--KSNGATILSHNSWLDNWTITAKPNCGKKPQAVVNYR-NLGDV---- 339
            C++++    SQ  K + A + S +SWL  W    K N  K PQA VNYR N  D+    
Sbjct: 65  TCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALG 124

Query: 340 ---XXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMSR 468
                                 +IVEKLKKFGY+ D     +N  R
Sbjct: 125 FARTDSDGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDGDNDER 170