BLASTX nr result
ID: Rehmannia24_contig00025064
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00025064
(479 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 114 1e-23
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 114 1e-23
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 114 1e-23
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 114 1e-23
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps... 103 2e-20
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps... 103 2e-20
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi... 102 5e-20
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 102 5e-20
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu... 102 7e-20
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei... 101 1e-19
gb|ADL36848.1| WHY domain class transcription factor [Malus dome... 100 3e-19
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 97 2e-18
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 97 2e-18
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 97 2e-18
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 97 2e-18
ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutr... 94 1e-17
ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutr... 94 1e-17
gb|EMJ01725.1| hypothetical protein PRUPE_ppa011529mg [Prunus pe... 94 2e-17
gb|AFK37234.1| unknown [Lotus japonicus] 91 2e-16
ref|XP_004494755.1| PREDICTED: single-stranded DNA-bindig protei... 91 2e-16
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 114 bits (286), Expect = 1e-23
Identities = 58/81 (71%), Positives = 65/81 (80%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
+ADGSGYFVSLSVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 157 NADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSES 216
Query: 183 ASKSSLGAVPVPELQTSEWDR 245
S+S + VP+L +EWDR
Sbjct: 217 ISQSP--SKVVPQLMEAEWDR 235
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 114 bits (286), Expect = 1e-23
Identities = 58/81 (71%), Positives = 65/81 (80%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
+ADGSGYFVSLSVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 160 NADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSES 219
Query: 183 ASKSSLGAVPVPELQTSEWDR 245
S+S + VP+L +EWDR
Sbjct: 220 ISQSP--SKVVPQLMEAEWDR 238
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 114 bits (285), Expect = 1e-23
Identities = 57/81 (70%), Positives = 65/81 (80%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
+ADGSGYF+SLSVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 160 NADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSES 219
Query: 183 ASKSSLGAVPVPELQTSEWDR 245
S+S + VP+L +EWDR
Sbjct: 220 ISQSP--SKVVPQLMEAEWDR 238
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 114 bits (285), Expect = 1e-23
Identities = 57/81 (70%), Positives = 65/81 (80%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
+ADGSGYF+SLSVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 160 NADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSES 219
Query: 183 ASKSSLGAVPVPELQTSEWDR 245
S+S + VP+L +EWDR
Sbjct: 220 ISQSP--SKVVPQLMEAEWDR 238
>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571469|gb|EOA35657.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 235
Score = 103 bits (257), Expect = 2e-20
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGYF+SL V+N+ILKTNDR VVPVTTAEF VM+ AF+F LPH+MGWDR T+Q
Sbjct: 155 HADGSGYFISLGVINSILKTNDRIVVPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTG 214
Query: 183 ASKSSLGAVPVPELQTSEWDR 245
+++ P+ EWD+
Sbjct: 215 TQRTTSHGNTDPQQLEQEWDK 235
>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571468|gb|EOA35656.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 234
Score = 103 bits (257), Expect = 2e-20
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGYF+SL V+N+ILKTNDR VVPVTTAEF VM+ AF+F LPH+MGWDR T+Q
Sbjct: 154 HADGSGYFISLGVINSILKTNDRIVVPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTG 213
Query: 183 ASKSSLGAVPVPELQTSEWDR 245
+++ P+ EWD+
Sbjct: 214 TQRTTSHGNTDPQQLEQEWDK 234
>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
Length = 178
Score = 102 bits (254), Expect = 5e-20
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 170
+ADGSGYF+SLSVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 114 NADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 102 bits (254), Expect = 5e-20
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 170
+ADGSGYF+SLSVVNN LKTNDRF VPVTTAEFAVMR AF+FALPHIMGWDR TN+
Sbjct: 114 NADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
gi|118484514|gb|ABK94132.1| unknown [Populus
trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
protein POPTR_0003s04700g [Populus trichocarpa]
Length = 229
Score = 102 bits (253), Expect = 7e-20
Identities = 54/82 (65%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQP-H 179
HADGSGYFVSLSVVNNILKT +RF VPVTTAEF V++ A +FALPHIMGWDR T P
Sbjct: 151 HADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGT 210
Query: 180 YASKSSLGAVPVPELQTSEWDR 245
ASK S +P+L EWD+
Sbjct: 211 LASKLSKVDPQMPDL---EWDK 229
>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 240
Score = 101 bits (251), Expect = 1e-19
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = +3
Query: 6 ADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYA 185
A+ G+F+SL+V NNILKTN+RFVVPVTTAEFAVM+ A +FALPH+MGWDR TNQ P +
Sbjct: 161 ANADGFFISLNVANNILKTNERFVVPVTTAEFAVMKTACSFALPHLMGWDRLTNQLPRSS 220
Query: 186 SKSSLGAVPVPELQTSEWDR 245
+ SS + + EWD+
Sbjct: 221 TDSSSSSKVDQQFLNLEWDK 240
>gb|ADL36848.1| WHY domain class transcription factor [Malus domestica]
Length = 237
Score = 100 bits (248), Expect = 3e-19
Identities = 52/83 (62%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGYFVSL+VVNN+LKT + F VPV TAEFAVM+ A +FALPHIMGWDR TN+ P
Sbjct: 156 HADGSGYFVSLTVVNNLLKTRESFSVPVMTAEFAVMKTACSFALPHIMGWDRLTNKMPAG 215
Query: 183 ASKSSLG--AVPVPELQTSEWDR 245
G + VP+L EWDR
Sbjct: 216 GGGGGGGQESKAVPQL-LEEWDR 237
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGYF+SLSV N+ILKTND FVVPVT AEFAVM+ AF+FALPHIMGW+R T H+
Sbjct: 114 HADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHLEHH 173
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGYF+SLSV N+ILKTND FVVPVT AEFAVM+ AF+FALPHIMGW+R T +
Sbjct: 156 HADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG----H 211
Query: 183 ASKSSLGAVPVPELQTS-----EWDR 245
+ +L + V L+T EWD+
Sbjct: 212 VNTEALPSRNVSHLKTEPQLELEWDK 237
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 97.1 bits (240), Expect = 2e-18
Identities = 52/86 (60%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGYF+SLSV N ILKTND FVVPVT AEFAVM+ AF+FALPHIMGW+R T Q
Sbjct: 161 HADGSGYFISLSVNNGILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGQ---- 216
Query: 183 ASKSSLGAVPVPELQTS-----EWDR 245
+ +L V L+T EWD+
Sbjct: 217 GNTEALPPRNVTHLKTDPQLELEWDK 242
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGYF+SLSV N+ILKTND FVVPVT AEFAVM+ AF+FALPHIMGW+R T +
Sbjct: 157 HADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG----H 212
Query: 183 ASKSSLGAVPVPELQTS-----EWDR 245
+ +L + V L+T EWD+
Sbjct: 213 VNTEALPSRNVSHLKTEPQLELEWDK 238
>ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087222|gb|ESQ28074.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 241
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 170
HADGSGYF+SL+V N+ILKTN+R VVPVTTAEF VM+ AF+FALPHIMGWDR Q
Sbjct: 162 HADGSGYFISLTVNNSILKTNERIVVPVTTAEFVVMKTAFSFALPHIMGWDRILGQ 217
>ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087221|gb|ESQ28073.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 240
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQ 170
HADGSGYF+SL+V N+ILKTN+R VVPVTTAEF VM+ AF+FALPHIMGWDR Q
Sbjct: 161 HADGSGYFISLTVNNSILKTNERIVVPVTTAEFVVMKTAFSFALPHIMGWDRILGQ 216
>gb|EMJ01725.1| hypothetical protein PRUPE_ppa011529mg [Prunus persica]
Length = 207
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/81 (56%), Positives = 53/81 (65%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHY 182
HADGSGY VSL+VVNN+LKT + F+VPVT AEFAVM+ A +F LPHIMGWDR + P
Sbjct: 130 HADGSGYLVSLAVVNNLLKTKENFIVPVTAAEFAVMKTACSFVLPHIMGWDRLMSNMPTV 189
Query: 183 ASKSSLGAVPVPELQTSEWDR 245
VP EWDR
Sbjct: 190 VGGQQSKVVP---QLLDEWDR 207
>gb|AFK37234.1| unknown [Lotus japonicus]
Length = 235
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = +3
Query: 3 HADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQ 173
HA+ SGYFVSL+VVNN+L + F VPVTTAEFAVM+ A +FALPHIMGWDR TNQQ
Sbjct: 154 HANSSGYFVSLTVVNNLLNAKENFNVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQ 210
>ref|XP_004494755.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like [Cicer arietinum]
Length = 233
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +3
Query: 15 SGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRAAFTFALPHIMGWDRCTNQQPHYASKS 194
+GYFVSL+VVN +L T D F VPVTTAEFAVM+ A +FALPHIMGWDR TNQQ
Sbjct: 157 NGYFVSLNVVNIVLNTKDSFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQMQSNGTV 216
Query: 195 SLGAVPVPELQTSEWDR 245
+ P++ EWD+
Sbjct: 217 GFQSKTNPQILDLEWDK 233