BLASTX nr result

ID: Rehmannia24_contig00025033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00025033
         (537 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345428.1| PREDICTED: protein OBERON 4-like [Solanum tu...   100   2e-19
ref|XP_004229643.1| PREDICTED: protein OBERON 4-like [Solanum ly...    99   5e-19
gb|EPS68580.1| hypothetical protein M569_06187, partial [Genlise...    65   1e-08
ref|XP_003605787.1| Protein VERNALIZATION INSENSITIVE [Medicago ...    55   8e-06

>ref|XP_006345428.1| PREDICTED: protein OBERON 4-like [Solanum tuberosum]
          Length = 1167

 Score =  100 bits (249), Expect = 2e-19
 Identities = 57/114 (50%), Positives = 66/114 (57%)
 Frame = +1

Query: 196 MKRLRSSDDLHSYGEKGVVKDWGRREEXXXXXXXXXXXXXXXXXXXXXXXXKVLSSSTSR 375
           MKRLRSSDDL S GEKGV+KDW RREE                        K LSSS+SR
Sbjct: 1   MKRLRSSDDLESCGEKGVLKDWARREEDPSLHRSSSNRSFYYKSESGR---KGLSSSSSR 57

Query: 376 YDRVEDDRESSKLVRKRPDYDLEXXXXXXXXXXXXXVNERGVLSSSPRAGYGMD 537
           YDR EDDRES + ++KR DYDL+              N++GVLSSSPR GYG +
Sbjct: 58  YDRFEDDRESLRPIKKRSDYDLDNYDRRKSYNRYSHSNDKGVLSSSPRGGYGAE 111


>ref|XP_004229643.1| PREDICTED: protein OBERON 4-like [Solanum lycopersicum]
          Length = 1167

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 56/114 (49%), Positives = 66/114 (57%)
 Frame = +1

Query: 196 MKRLRSSDDLHSYGEKGVVKDWGRREEXXXXXXXXXXXXXXXXXXXXXXXXKVLSSSTSR 375
           MKRLRSSDDL S GEKGV+KDW RREE                        K LSSS+SR
Sbjct: 1   MKRLRSSDDLESCGEKGVLKDWARREEDPSLHRSSSNRSFYYKSESGR---KGLSSSSSR 57

Query: 376 YDRVEDDRESSKLVRKRPDYDLEXXXXXXXXXXXXXVNERGVLSSSPRAGYGMD 537
           YDR EDDRES + ++KR DYD++              N++GVLSSSPR GYG +
Sbjct: 58  YDRFEDDRESLRPIKKRSDYDVDNYDRRKSYNRYSHSNDKGVLSSSPRGGYGAE 111


>gb|EPS68580.1| hypothetical protein M569_06187, partial [Genlisea aurea]
          Length = 802

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
 Frame = +1

Query: 196 MKRLRSSDDLHSYGEKGVVKDWGRREEXXXXXXXXXXXXXXXXXXXXXXXXKVLSS--ST 369
           MKRLRS+DDLHSYGEK   KDWGRR+                         + L +  S 
Sbjct: 1   MKRLRSNDDLHSYGEKPAGKDWGRRDGESSSQRSSSSLHRNNSFYKHSDAGRKLQTTPSA 60

Query: 370 SRYDRVEDDRESSKLVRKRPDYDLE 444
           SR+DR ED ++ S+ VR+R D+D E
Sbjct: 61  SRHDRSEDGKDGSRAVRRRSDFDSE 85


>ref|XP_003605787.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula]
           gi|355506842|gb|AES87984.1| Protein VERNALIZATION
           INSENSITIVE [Medicago truncatula]
          Length = 2087

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = +1

Query: 196 MKRLRSSDDLHSYGEK-GVVKDWGRREEXXXXXXXXXXXXXXXXXXXXXXXXKVLSSSTS 372
           MKRLRSS+DLHSYGEK G  K+  +                            + SSS+S
Sbjct: 1   MKRLRSSEDLHSYGEKNGGDKNGVKDSSNLNRSFSSTGQRSFYYKQENVRKSLISSSSSS 60

Query: 373 RYDR---VEDDRESSKLVRKRPDYDLE 444
           RY+R   VE+DRE S+LVRKR ++D +
Sbjct: 61  RYERDRTVEEDREGSRLVRKRSEHDFD 87


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