BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023964
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   163   2e-38
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660...   153   2e-35
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]   152   3e-35
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   152   4e-35
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]   151   7e-35
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   151   7e-35
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]   150   2e-34
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              149   5e-34
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   148   6e-34
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   148   6e-34
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   147   2e-33
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]   146   2e-33
gb|AAB82754.1| retrofit [Oryza longistaminata]                        144   9e-33
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]   143   2e-32
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  143   3e-32
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   143   3e-32
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...   142   3e-32
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   142   3e-32
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   142   3e-32
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   142   3e-32

>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  163 bits (413), Expect = 2e-38
 Identities = 71/113 (62%), Positives = 90/113 (79%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           TLLAQA+LP KFWW+AF  A FLINRLP+  L+  SPYQ+LF + PDY  L++FGCACFP
Sbjct: 95  TLLAQANLPLKFWWNAFHTAVFLINRLPTPTLNNISPYQKLFQQVPDYVSLRVFGCACFP 154

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPY 343
           YLRPYN  KL FR+++C+F+ YS +HKGY+CLH SGR+Y++  V F+E  FPY
Sbjct: 155 YLRPYNRHKLSFRSNRCVFIGYSSSHKGYQCLHSSGRVYVSNHVIFDEQSFPY 207


>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
          Length = 868

 Score =  153 bits (387), Expect = 2e-35
 Identities = 68/116 (58%), Positives = 91/116 (78%)
 Frame = +2

Query: 8    LLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPY 187
            LLAQ++LP KFW  +F+ A +LINRLPS +L+ QS Y +L NK PDY+ L++FGC+CFP+
Sbjct: 741  LLAQSTLPLKFWDHSFVTAAYLINRLPSVSLNNQSLYFKLLNKQPDYSCLRVFGCSCFPF 800

Query: 188  LRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 355
            LRPYN+ KL +R+ +C+FL YS  HKGYKCL P+G +YI+K V F E++FPY  LF
Sbjct: 801  LRPYNSHKLDYRSQECIFLGYSTAHKGYKCLAPNGHIYISKDVLFQESKFPYSTLF 856


>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
          Length = 1099

 Score =  152 bits (385), Expect = 3e-35
 Identities = 66/119 (55%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSAL-HFQSPYQQLFNKAPDYTFLKIFGCACF 181
           TLLAQ ++P  FWWDA + + F+IN+L +  L +FQSP++ LF    DY+F K+FGC+C+
Sbjct: 419 TLLAQDAMPLTFWWDACVSSVFIINQLLTKVLANFQSPFKTLFGSKLDYSFFKVFGCSCY 478

Query: 182 PYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLFT 358
            YLRPYN+ K  FR++KCLFL YSP HKGY+CL  SG++Y+AK++ FNE +FPY  L T
Sbjct: 479 SYLRPYNSHKFSFRSTKCLFLGYSPXHKGYRCLSXSGQIYVAKSITFNENDFPYSTLLT 537


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  152 bits (384), Expect = 4e-35
 Identities = 69/113 (61%), Positives = 86/113 (76%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           TLLAQASLP K+W DAF  A FLINRLP+  L  + PY+ LFN  P+Y+ LK+FGC CFP
Sbjct: 490 TLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFP 549

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPY 343
           +LRPYN  KL FR+S C FL YS  HKGYKCL+  GR++I+++V F+ET FP+
Sbjct: 550 HLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPF 602


>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
          Length = 722

 Score =  151 bits (382), Expect = 7e-35
 Identities = 66/123 (53%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSAL-HFQSPYQQLFNKAPDYTFLKIFGCACF 181
           T LAQA +P  FW DA +   F+IN+LP+  L +FQSP++ LF   PDY+F K+FGC+C+
Sbjct: 445 TFLAQAVMPLTFWLDACVSFVFIINQLPTKVLANFQSPFETLFGSKPDYSFFKVFGCSCY 504

Query: 182 PYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLFTS 361
           PYLR YN+ K  F+++KCLFL YSP H GY+C   S R+Y+AK V FNE +FPY  LFT 
Sbjct: 505 PYLRSYNSHKFSFKSTKCLFLGYSPAHNGYRCFSSSNRIYVAKLVTFNENDFPYSTLFTQ 564

Query: 362 TSS 370
            ++
Sbjct: 565 PNT 567


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score =  151 bits (382), Expect = 7e-35
 Identities = 69/123 (56%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           TLLA +S+P KFW +AF  A +LINR P+  L F +P + LFN+ PDY+ L++FGCAC+P
Sbjct: 629 TLLAYSSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWP 688

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFNETEFPYPLLFTS 361
           +LRPYNT KLQFR+ +C FL YS  HKG+KCL PS GR+YI++ V F+ET FP+  L T+
Sbjct: 689 HLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRDVIFDETNFPFAKLHTN 748

Query: 362 TSS 370
             +
Sbjct: 749 AGA 751


>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
          Length = 1242

 Score =  150 bits (379), Expect = 2e-34
 Identities = 68/113 (60%), Positives = 86/113 (76%)
 Frame = +2

Query: 5    TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
            TLLAQASLP K+W DAF    FLINRLP+  L  + PY+ LFN  P+Y+ LK+FGC CFP
Sbjct: 736  TLLAQASLPLKYWPDAFSTXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFP 795

Query: 185  YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPY 343
            +LRPYN  KL FR+S C FL YS  HKGYKCL+  GR++I+++V F+ET+FP+
Sbjct: 796  HLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVXFDETKFPF 848


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  149 bits (375), Expect = 5e-34
 Identities = 68/127 (53%), Positives = 95/127 (74%), Gaps = 3/127 (2%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           TLLA A +P  +W D+F  A ++INRLPS  L++ SPY+QLF++ P Y  LK+FGCACFP
Sbjct: 573 TLLAHAHMPSTYWVDSFNTAVYIINRLPSRVLNYASPYEQLFHRVPQYHSLKVFGCACFP 632

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHP-SGRLYIAKTVAFNETEFPY--PLLF 355
           YLRPYN+SKLQ R+ +C+FL YS  H+GY+C  P SGR+Y+++ V F+E+ FP+  P L 
Sbjct: 633 YLRPYNSSKLQLRSKRCVFLGYSLNHQGYRCFDPSSGRVYLSRHVLFDESSFPFTEPALT 692

Query: 356 TSTSSTS 376
           +++S  S
Sbjct: 693 SNSSIDS 699


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  148 bits (374), Expect = 6e-34
 Identities = 72/132 (54%), Positives = 90/132 (68%), Gaps = 8/132 (6%)
 Frame = +2

Query: 5    TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
            TLL  ASLP KFW ++F    +L NRLP++ LH + P + LF   PDY+FLK+FGC+CFP
Sbjct: 695  TLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFP 754

Query: 185  YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYP------ 346
             LRPYNT KLQ+R+ +C FL YS  HKGYKC+  +GR+YI+  V FNET FPY       
Sbjct: 755  NLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVS 814

Query: 347  --LLFTSTSSTS 376
              LL T + STS
Sbjct: 815  SCLLSTVSPSTS 826


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  148 bits (374), Expect = 6e-34
 Identities = 68/113 (60%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8    LLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPY 187
            LLA ASLP KFW  AF  A FLINRLP+  L++QSP+Q LF K+P+Y   KIFGC C+PY
Sbjct: 693  LLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPY 752

Query: 188  LRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHP-SGRLYIAKTVAFNETEFPY 343
            +RPYN +KL +R+S+C+FL YS  HKGY CL+P +GRLY+ + V F+ET FP+
Sbjct: 753  IRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPF 805


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  147 bits (370), Expect = 2e-33
 Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8   LLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPY 187
           LLA ASLP KFW  AF    FLINRLP+  L++QSP+Q LF K+P+Y   KIFGC C+PY
Sbjct: 502 LLATASLPFKFWLYAFHTTIFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPY 561

Query: 188 LRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHP-SGRLYIAKTVAFNETEFPY 343
           +RPYN +KL +R+S+C+FL YS  HKGY CL+P +GRLY+ + V F+ET FP+
Sbjct: 562 IRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPF 614


>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
          Length = 846

 Score =  146 bits (369), Expect = 2e-33
 Identities = 66/121 (54%), Positives = 86/121 (71%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           TLL  ASLP KFW ++F    +L NRLP++ LH + P + LF   PDY+FLK+FGC+CFP
Sbjct: 277 TLLHTASLPLKFWDESFRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFP 336

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLFTST 364
            LRPYNT KLQ+R+ +C FL YS  HKGYKC+  +GR+YI++ V FNET F Y     ++
Sbjct: 337 NLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMFSNGRVYISRDVIFNETSFSYSKTIQAS 396

Query: 365 S 367
           S
Sbjct: 397 S 397


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  144 bits (364), Expect = 9e-33
 Identities = 64/123 (52%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           +LL+ AS+P KFW +AF+ AT+LINR+PS  +   +P ++LFN+ PDY+ L++FGCAC+P
Sbjct: 629 SLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWP 688

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLH-PSGRLYIAKTVAFNETEFPYPLLFTS 361
           +LRPYNT KLQFR+ +C+FL +S  HKG+KCL   SGR+YI++ V F+E  FP+  L ++
Sbjct: 689 HLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENVFPFSTLHSN 748

Query: 362 TSS 370
             +
Sbjct: 749 AGA 751


>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
          Length = 1211

 Score =  143 bits (361), Expect = 2e-32
 Identities = 64/121 (52%), Positives = 84/121 (69%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           TLL   SLP KFW ++F I  +L NRLP+  LH + P + LF   P+Y+FLK+FGC+CFP
Sbjct: 516 TLLHTTSLPLKFWDESFRIVVYLSNRLPTVVLHHKCPIEVLFKSIPBYSFLKVFGCSCFP 575

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLFTST 364
            LRPYNT KLQ+ + +C FL YS  HKGY C+  +GR+YI++ V FNET FPY     ++
Sbjct: 576 NLRPYNTHKLQYXSEECTFLGYSLKHKGYXCMSSNGRVYISRDVIFNETSFPYSKTIQAS 635

Query: 365 S 367
           S
Sbjct: 636 S 636


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  143 bits (360), Expect = 3e-32
 Identities = 64/123 (52%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           +LL+ AS+P KFW +AF+ AT+LINR+PS  +   +P ++LFN+ PDY  L++FGCAC+P
Sbjct: 629 SLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWP 688

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLH-PSGRLYIAKTVAFNETEFPYPLLFTS 361
           +LRPYNT KLQFR+ +C+FL +S  HKG+KCL   SGR+YI++ V F+E  FP+  L ++
Sbjct: 689 HLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPFSTLHSN 748

Query: 362 TSS 370
             +
Sbjct: 749 AGA 751


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score =  143 bits (360), Expect = 3e-32
 Identities = 67/116 (57%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +2

Query: 8   LLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPY 187
           LLA +S+P KFW +AFL A +LINR PS  LH  SP ++L    PDY  L++FGCAC+P 
Sbjct: 628 LLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPN 687

Query: 188 LRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFNETEFPYPLL 352
           LRPYN  KLQFR++ C FL YS  HKG+KCL PS GR+YI++ V F+ET+FP+  L
Sbjct: 688 LRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFTKL 743


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 969

 Score =  142 bits (359), Expect = 3e-32
 Identities = 64/123 (52%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           +LLA AS+P KFW +AFL A +LINR P+  L+  +P+++LF+K PDY+ L+IFGC C+P
Sbjct: 476 SLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWP 535

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFNETEFPYPLLFTS 361
            LRPYN+ KLQFR+ +C+FL YS  HKG+KCL  S GR+Y+++ V F+E  FP+  L ++
Sbjct: 536 NLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFASLHSN 595

Query: 362 TSS 370
             +
Sbjct: 596 AGA 598


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 1313

 Score =  142 bits (359), Expect = 3e-32
 Identities = 64/123 (52%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           +LLA AS+P KFW +AFL A +LINR P+  L+  +P+++LF+K PDY+ L+IFGC C+P
Sbjct: 476 SLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWP 535

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFNETEFPYPLLFTS 361
            LRPYN+ KLQFR+ +C+FL YS  HKG+KCL  S GR+Y+++ V F+E  FP+  L ++
Sbjct: 536 NLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFASLHSN 595

Query: 362 TSS 370
             +
Sbjct: 596 AGA 598


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1431

 Score =  142 bits (359), Expect = 3e-32
 Identities = 65/114 (57%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
 Frame = +2

Query: 5   TLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFP 184
           +LLA AS+P KFW +AFL AT+LINRLPS  + F +P ++LF + PDY  L+ FGCAC+P
Sbjct: 616 SLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWP 675

Query: 185 YLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFNETEFPY 343
            LRPYNT KLQFR+ +C+FL +S  HKG+KCL  S GR+Y+++ V F+E  FP+
Sbjct: 676 NLRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVSRDVTFDEQVFPF 729


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108706314|gb|ABF94109.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1247

 Score =  142 bits (359), Expect = 3e-32
 Identities = 65/116 (56%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +2

Query: 8   LLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPY 187
           LLA +S+P KFW +AF  A +LINR PS  L + +P ++LF + PDY  L++FGCAC+P+
Sbjct: 428 LLAYSSMPLKFWDEAFTSAVYLINRTPSRLLKYATPLERLFKQTPDYNLLRVFGCACWPH 487

Query: 188 LRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFNETEFPYPLL 352
           LRPYN  KLQFR+ +C FL YSP HKG+KCL PS GR+YI+  V F+E  FP+  L
Sbjct: 488 LRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPSTGRVYISHDVIFDENVFPFASL 543