BLASTX nr result

ID: Rehmannia24_contig00023336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023336
         (414 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|5...    60   4e-07
ref|XP_006377719.1| hypothetical protein POPTR_0011s10530g [Popu...    59   9e-07
ref|XP_002331319.1| f-box family protein [Populus trichocarpa]         59   9e-07
ref|XP_006377716.1| hypothetical protein POPTR_0011s10510g [Popu...    58   1e-06
ref|XP_002331320.1| f-box family protein [Populus trichocarpa]         58   1e-06
ref|XP_002331322.1| predicted protein [Populus trichocarpa]            58   1e-06

>ref|XP_002331321.1| predicted protein [Populus trichocarpa]
           gi|566194795|ref|XP_006377718.1| hypothetical protein
           POPTR_0011s10520g [Populus trichocarpa]
           gi|550328101|gb|ERP55515.1| hypothetical protein
           POPTR_0011s10520g [Populus trichocarpa]
          Length = 378

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/99 (37%), Positives = 57/99 (57%)
 Frame = +1

Query: 55  IELPKSVSLQNLKILRLKNFEFSDWSYNGEVFSGCPNLETLVLGKCSIRPTNKLKILDVN 234
           I LPKS+ L +LK L L   +    +++G++FS CPNLE L +    +   N ++  +++
Sbjct: 162 IALPKSLGLPSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDICL---NTIENFNIH 214

Query: 235 CLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 351
            LNLK+LEI +WR   R      + + APKL  F F G+
Sbjct: 215 ALNLKSLEILNWRYS-RIMRGCKVMLFAPKLTSFKFDGN 252


>ref|XP_006377719.1| hypothetical protein POPTR_0011s10530g [Populus trichocarpa]
           gi|550328102|gb|ERP55516.1| hypothetical protein
           POPTR_0011s10530g [Populus trichocarpa]
          Length = 418

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/99 (38%), Positives = 57/99 (57%)
 Frame = +1

Query: 55  IELPKSVSLQNLKILRLKNFEFSDWSYNGEVFSGCPNLETLVLGKCSIRPTNKLKILDVN 234
           I LPKS+ LQ+LK L L        +++G++FS CPNLE L +    +   N ++  +++
Sbjct: 181 IALPKSLGLQSLKTLHLGGAR----NFDGKIFSTCPNLENLKIEDIYL---NTIENFNIH 233

Query: 235 CLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 351
            LNLK+LEI +WR   R      + + APKL  F F G+
Sbjct: 234 ALNLKSLEILNWRY-GRIMRGCKVMLFAPKLTSFKFYGN 271


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
          Length = 453

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/99 (38%), Positives = 57/99 (57%)
 Frame = +1

Query: 55  IELPKSVSLQNLKILRLKNFEFSDWSYNGEVFSGCPNLETLVLGKCSIRPTNKLKILDVN 234
           I LPKS+ LQ+LK L L        +++G++FS CPNLE L +    +   N ++  +++
Sbjct: 181 IALPKSLGLQSLKTLHLGGAR----NFDGKIFSTCPNLENLKIEDIYL---NTIENFNIH 233

Query: 235 CLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 351
            LNLK+LEI +WR   R      + + APKL  F F G+
Sbjct: 234 ALNLKSLEILNWRY-GRIMRGCKVMLFAPKLTSFKFYGN 271


>ref|XP_006377716.1| hypothetical protein POPTR_0011s10510g [Populus trichocarpa]
           gi|566194793|ref|XP_006377717.1| hypothetical protein
           POPTR_0011s10510g [Populus trichocarpa]
           gi|550328099|gb|ERP55513.1| hypothetical protein
           POPTR_0011s10510g [Populus trichocarpa]
           gi|550328100|gb|ERP55514.1| hypothetical protein
           POPTR_0011s10510g [Populus trichocarpa]
          Length = 378

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 58/99 (58%)
 Frame = +1

Query: 55  IELPKSVSLQNLKILRLKNFEFSDWSYNGEVFSGCPNLETLVLGKCSIRPTNKLKILDVN 234
           + LPKS+ LQ+LK L L   +    +++G++FS CPNLE L +    +   N ++  +++
Sbjct: 162 LALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDICL---NVIENFNIH 214

Query: 235 CLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 351
            L+LK+LEI +WR   R      + + APKL  F F G+
Sbjct: 215 ALSLKSLEILNWRYN-RIKQGCKVMLVAPKLTSFKFDGN 252


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
          Length = 453

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 58/99 (58%)
 Frame = +1

Query: 55  IELPKSVSLQNLKILRLKNFEFSDWSYNGEVFSGCPNLETLVLGKCSIRPTNKLKILDVN 234
           + LPKS+ LQ+LK L L   +    +++G++FS CPNLE L +    +   N ++  +++
Sbjct: 181 LALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDICL---NVIENFNIH 233

Query: 235 CLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 351
            L+LK+LEI +WR   R      + + APKL  F F G+
Sbjct: 234 ALSLKSLEILNWRYN-RIKQGCKVMLVAPKLTSFKFDGN 271


>ref|XP_002331322.1| predicted protein [Populus trichocarpa]
          Length = 335

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 58/99 (58%)
 Frame = +1

Query: 55  IELPKSVSLQNLKILRLKNFEFSDWSYNGEVFSGCPNLETLVLGKCSIRPTNKLKILDVN 234
           + LPKS+ LQ+LK L L   +    +++G++FS CPNLE L +    +   N ++  +++
Sbjct: 162 LALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDICL---NVIENFNIH 214

Query: 235 CLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 351
            L+LK+LEI +WR   R      + + APKL  F F G+
Sbjct: 215 ALSLKSLEILNWRYN-RIKQGCKVMLVAPKLTSFKFYGN 252


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