BLASTX nr result

ID: Rehmannia24_contig00023308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023308
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004229453.1| PREDICTED: uncharacterized protein At5g19025...    72   1e-10
ref|XP_006339411.1| PREDICTED: uncharacterized protein At5g19025...    68   1e-09
gb|EXB95838.1| Uncharacterized protein L484_010037 [Morus notabi...    57   3e-06
ref|XP_006387008.1| hypothetical protein POPTR_2237s00200g, part...    55   1e-05
ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025...    55   1e-05
emb|CAN71157.1| hypothetical protein VITISV_036761 [Vitis vinifera]    55   1e-05

>ref|XP_004229453.1| PREDICTED: uncharacterized protein At5g19025-like [Solanum
           lycopersicum]
          Length = 248

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 52/132 (39%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
 Frame = -2

Query: 353 MPHHLLYSIITMAPSSLRKTPTPKTPASQ-QSNP------------HCEHSPSAXXXXXX 213
           M HH L S ITMAPSS    P  KT  S   SNP             C HSPSA      
Sbjct: 1   MHHHFLSSFITMAPSSSLTKPLKKTSNSNPNSNPTNSPNCPSSHHNFCNHSPSATLDLLI 60

Query: 212 XXXXLFSGAFLIISYFSYLFQTLSYIFPSFPTLISH--LHYQLNSNPQSPLIXXXXXXXX 39
               LFSGAFLIISYFSY+F ++S +FP  P+ + +  L+Y    +  +  I        
Sbjct: 61  FILVLFSGAFLIISYFSYIFNSISLLFPYPPSFLLNTLLNYLEEVDVWTHYIFYIFFVVV 120

Query: 38  XXXXXXXFEICC 3
                  FEICC
Sbjct: 121 FVVVVLCFEICC 132


>ref|XP_006339411.1| PREDICTED: uncharacterized protein At5g19025-like [Solanum
           tuberosum]
          Length = 254

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 24/108 (22%)
 Frame = -2

Query: 353 MPHHLLYSIITMAPSS-----------LRKTPTPKTPASQQSNPHC--------EHSPSA 231
           M H+LL S ITMAPSS           L+KT      ++  ++P+C         HSPSA
Sbjct: 1   MHHYLLSSFITMAPSSSSSSSSSLSKPLKKTSNSNPNSNPTNSPNCPSSHHNLCNHSPSA 60

Query: 230 XXXXXXXXXXLFSGAFLIISYFSYLFQTLSYIFPSFP-----TLISHL 102
                     LFSGAFLIISYFSY+F ++S +FP  P     TL++HL
Sbjct: 61  TLDLLIFILVLFSGAFLIISYFSYIFNSISLLFPYPPSLLLNTLLTHL 108


>gb|EXB95838.1| Uncharacterized protein L484_010037 [Morus notabilis]
          Length = 218

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
 Frame = -2

Query: 377 LRPLFITNMPHHLLYSIITMAPSSLRKTPTPKTPASQQSNPH-------CEHSPSAXXXX 219
           +R L +  MP     S  + + SS   +P+P +  S+ SNP+       C+HSPSA    
Sbjct: 1   MRHLLLPTMPA----SSSSSSSSSAVASPSPTSSKSKSSNPNPNPNSLPCKHSPSATLDL 56

Query: 218 XXXXXXLFSGAFLIISYFSYLFQTLSYIFPSFPTLISHLHYQL 90
                 LFSG+FL+ SYFSY+F +LS +  S    + H+   L
Sbjct: 57  LILILVLFSGSFLLTSYFSYIFNSLSLLLSSSSFHVHHVQLHL 99


>ref|XP_006387008.1| hypothetical protein POPTR_2237s00200g, partial [Populus
           trichocarpa] gi|550304052|gb|ERP45922.1| hypothetical
           protein POPTR_2237s00200g, partial [Populus trichocarpa]
          Length = 218

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 24/100 (24%)
 Frame = -2

Query: 347 HHLLYSIITMAPSSLRKTPTP----------KTPASQQSNPH-----CEHSPSAXXXXXX 213
           HHL +   TM PSS   TP P              +  SNP+     C+HSPSA      
Sbjct: 2   HHLFFFFFTMPPSS-SFTPKPLKSSAASSSSSNTGNTNSNPNPSTLPCKHSPSATLDLLI 60

Query: 212 XXXXLFSGAFLIISYFSYLFQTLSYI---------FPSFP 120
               LFSG FL+ SYFSY+F +LS +         FP FP
Sbjct: 61  LILVLFSGTFLLTSYFSYIFNSLSLLLSNTSLSLHFPPFP 100


>ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025 [Vitis vinifera]
          Length = 216

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -2

Query: 326 ITMAPSSLRKTPTPKTPASQQSNPHCEHSPSAXXXXXXXXXXLFSGAFLIISYFSYLFQT 147
           +T +PS   + P+    A+   +  C+HSPSA          LFSG FLI SYFSY+ Q+
Sbjct: 3   VTSSPSPKPRKPSMNPNANPNCSLLCKHSPSATLDILILILVLFSGTFLITSYFSYIVQS 62

Query: 146 LSYIFPSFPTLISH 105
           LS I PS   ++SH
Sbjct: 63  LSLILPSI--ILSH 74


>emb|CAN71157.1| hypothetical protein VITISV_036761 [Vitis vinifera]
          Length = 371

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -2

Query: 326 ITMAPSSLRKTPTPKTPASQQSNPHCEHSPSAXXXXXXXXXXLFSGAFLIISYFSYLFQT 147
           +T +PS   + P+    A+   +  C+HSPSA          LFSG FLI SYFSY+ Q+
Sbjct: 3   VTSSPSPKPRKPSMNPNANPNCSLLCKHSPSATLDILILILVLFSGTFLITSYFSYIVQS 62

Query: 146 LSYIFPSFPTLISH 105
           LS I PS   ++SH
Sbjct: 63  LSLILPSI--ILSH 74


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