BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023293
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [...    86   4e-15
gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum...    85   9e-15
gb|AHB24929.1| chloroplast light-harvesting complex II chlorophy...    84   1e-14
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro...    84   2e-14
gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum...    84   2e-14
gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum...    84   2e-14
sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding pro...    84   2e-14
ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3...    84   3e-14
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...    84   3e-14
ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3...    83   3e-14
sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding pro...    83   4e-14
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3...    83   4e-14
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...    83   4e-14
gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyac...    83   4e-14
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein...    82   6e-14
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245...    82   6e-14
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3...    82   6e-14
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3...    82   6e-14
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3...    82   6e-14
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...    82   6e-14

>gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [Sedum alfredii]
          Length = 267

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 47/81 (58%), Positives = 50/81 (61%)
 Frame = +3

Query: 87  ASMAATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRV 266
           AS  A S   L      TAS+ +     GR     VTMR T  K +P    SPWYGPDRV
Sbjct: 3   ASTMALSSLSLAGQAVKTASSASEVFGSGR-----VTMRKTAAKPKPSASSSPWYGPDRV 57

Query: 267 KYLGPFSGEAPSYLTGEFPGD 329
           KYLGPFSGEAPSYLTGEFPGD
Sbjct: 58  KYLGPFSGEAPSYLTGEFPGD 78


>gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/61 (65%), Positives = 47/61 (77%)
 Frame = +3

Query: 147 NNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 326
           N  +++ +G  R   +TMR T GK +  + DSPWYGPDRVKYLGPFSGEAPSYLTGEFPG
Sbjct: 21  NPTTSQILGEGR---ITMRKTAGKTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 77

Query: 327 D 329
           D
Sbjct: 78  D 78


>gb|AHB24929.1| chloroplast light-harvesting complex II chlorophyll a/b binding
           protein 1 [Sedum alfredii]
          Length = 267

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 37/46 (80%), Positives = 38/46 (82%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           VTMR T  K +P    SPWYGPDRVKYLGPFSGEAPSYLTGEFPGD
Sbjct: 33  VTMRKTAAKSKPTVSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 78


>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
           AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
           Precursor gi|19819|emb|CAA36955.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 266

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = +3

Query: 96  AATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVKYL 275
           A+T+    P  G     + +S++  G  +   VTMR T  K +P +  SPWYGPDRVKYL
Sbjct: 3   ASTTALSSPFAGKAVKLSPSSSEVTGNGK---VTMRKTASKAKPVSSGSPWYGPDRVKYL 59

Query: 276 GPFSGEAPSYLTGEFPGD 329
           GPFSGE+PSYLTGEFPGD
Sbjct: 60  GPFSGESPSYLTGEFPGD 77


>gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 44/80 (55%), Positives = 55/80 (68%)
 Frame = +3

Query: 90  SMAATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVK 269
           ++++ SF G     + TAS     +++G  R   +TMR   GK +  T DSPWYGPDRVK
Sbjct: 7   ALSSPSFAGKAVKLSPTAS-----ETLGEGR---ITMRKAAGKSKVATIDSPWYGPDRVK 58

Query: 270 YLGPFSGEAPSYLTGEFPGD 329
           YLGPFSGE+PSYLTGEFPGD
Sbjct: 59  YLGPFSGESPSYLTGEFPGD 78


>gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           +TMR T GK +  + DSPWYGPDRVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 33  ITMRKTAGKTKSVSSDSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78


>sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
           AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
           Precursor gi|170212|gb|AAA34056.1| chlorophyll
           a/b-binding protein-E [Nicotiana plumbaginifolia]
          Length = 266

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = +3

Query: 96  AATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVKYL 275
           A+T+    P  G     + +S++  G  +   VTMR T  K +P +  SPWYGPDRVKYL
Sbjct: 3   ASTTALSSPFAGKAVKLSPSSSEVTGNGK---VTMRKTANKAKPVSSGSPWYGPDRVKYL 59

Query: 276 GPFSGEAPSYLTGEFPGD 329
           GPFSGE+PSYLTGEFPGD
Sbjct: 60  GPFSGESPSYLTGEFPGD 77


>ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGEAPSYLTGEFPGD
Sbjct: 33  ITMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 78


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           +TMR T GK +P +  SPWYGPDRVKYLGPFSGE PSYLTGEFPGD
Sbjct: 33  ITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGD 78


>ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 37/46 (80%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGEAPSYLTGEFPGD
Sbjct: 33  VTMRKTTTKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 78


>sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
           AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
           Precursor gi|20471|emb|CAA26210.1| unnamed protein
           product [Petunia sp.]
          Length = 266

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
 Frame = +3

Query: 141 ASNNNSNKSVGRP------RMTTVTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPS 302
           +S++ + K+V  P      R   VTMR T  K +P +  SPWYGPDRVKYLGPFSGEAPS
Sbjct: 9   SSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPS 68

Query: 303 YLTGEFPGD 329
           YLTGEFPGD
Sbjct: 69  YLTGEFPGD 77


>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 33  VTMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           VTMR T G+ +P +  SPWYGPDRVKYLGPFSGE PSYLTGEFPGD
Sbjct: 33  VTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGD 78


>gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
          Length = 239

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 48/85 (56%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
 Frame = +3

Query: 81  KMASMAATSFKGLPTLGAWTASNNNSNKSV--GRPRMTTVTMRATRGKKQPETPDSPWYG 254
           ++ SMA+T     P+L A TA     + SV  G  R T   MR T GK +  +  SPWYG
Sbjct: 9   ELLSMASTMALSSPSL-AGTAVKLTPSSSVVSGDGRFT---MRKTAGKPKTVSSGSPWYG 64

Query: 255 PDRVKYLGPFSGEAPSYLTGEFPGD 329
           P+RVKYLGPFSGEAPSYLTGEFPGD
Sbjct: 65  PERVKYLGPFSGEAPSYLTGEFPGD 89


>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 267

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 33  VTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78


>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
           lycopersicum]
          Length = 554

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78



 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
 Frame = +3

Query: 90  SMAATSFKGLPT---LGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPD 260
           S+ ATS   L +    G     + +S++  G  R   VTMR T  K +P +  SPWYGPD
Sbjct: 286 SIMATSTMALSSSTFAGKAVKLSPSSSEITGNGR---VTMRKTATKAKPASSGSPWYGPD 342

Query: 261 RVKYLGPFSGEAPSYLTGEFPGD 329
           RVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 343 RVKYLGPFSGESPSYLTGEFPGD 365


>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 6 [Solanum lycopersicum]
          Length = 244

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78


>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 5 [Solanum lycopersicum]
          Length = 255

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78


>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 1 [Solanum lycopersicum]
           gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 2
           [Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
           PREDICTED: chlorophyll a-b binding protein 3C,
           chloroplastic-like isoform 3 [Solanum lycopersicum]
           gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 4
           [Solanum lycopersicum]
          Length = 267

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGD
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 78


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 37/46 (80%), Positives = 39/46 (84%)
 Frame = +3

Query: 192 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 329
           VTMR T GK +  +  SPWYGPDRVKYLGPFSGEAPSYLTGEFPGD
Sbjct: 33  VTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGD 78