BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023288
         (1748 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   774   0.0  
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   713   0.0  
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   697   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              683   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   683   0.0  
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative...   679   0.0  
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative...   679   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   664   0.0  
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   664   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   660   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   659   0.0  
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   654   0.0  
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe...   652   0.0  
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   652   0.0  
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   641   0.0  
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   640   0.0  
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   633   e-179
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   632   e-178
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   624   e-176
gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus...   618   e-174

>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  774 bits (1998), Expect = 0.0
 Identities = 384/590 (65%), Positives = 458/590 (77%), Gaps = 8/590 (1%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEY  NS +I +EFCAGDPVGV
Sbjct: 772  RGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYSANSTDIVTEFCAGDPVGV 831

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAAT+MSNPAYKAVLD        W+MMK+ILLC  +FKND SDRRVILYL +C+CGRKH
Sbjct: 832  LAATSMSNPAYKAVLDSSSSSNSAWQMMKDILLCATSFKNDISDRRVILYLTDCECGRKH 891

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMH--EEGNPGPVGHIHLNKTLLIQSNI 536
            CQE  AL+V+NHLKKV+LKDTA++FLIEY  Q+    EEG PG VGHIHL++  LI+SN+
Sbjct: 892  CQETGALVVQNHLKKVTLKDTAVDFLIEYFHQLCQSLEEGYPGLVGHIHLSEMELIRSNV 951

Query: 537  SMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREA 716
            +   I E C + IN+ +KKKKV NLFK I L                T+VPC+QF W  A
Sbjct: 952  NKDRIFEGCLETINLYEKKKKVGNLFKKIKLSYSDHCTFCASSKSKRTEVPCVQFLWNGA 1011

Query: 717  KIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELAL 896
             ID+++K SHLL DTVCP L QT+IKGDPRVSTA IVW+SP  A+WIRSPSK   GE+A+
Sbjct: 1012 -IDDIDKVSHLLSDTVCPALLQTVIKGDPRVSTAEIVWVSPGTATWIRSPSKNLNGEMAI 1070

Query: 897  DIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRL 1076
            +++ EKEA + SGDAWRV MD C+P++HL+DT+RSIPYAIKQV ELLGISCAFEQAVQRL
Sbjct: 1071 EVVFEKEAARHSGDAWRVAMDSCVPVMHLIDTKRSIPYAIKQVQELLGISCAFEQAVQRL 1130

Query: 1077 STSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRK 1256
            STSVTMVTKGVLKDH+LLL N+MTC+GT IGFN+GGIK+LS+SL + VPFM ATLFTPRK
Sbjct: 1131 STSVTMVTKGVLKDHILLLGNNMTCAGTLIGFNSGGIKALSQSLDLHVPFMTATLFTPRK 1190

Query: 1257 CFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHM 1436
            CFERAAEKCHVD L+S+V SCAWGKHV+VGTGSPFEILW+T K +L P+KE+D Y FLH+
Sbjct: 1191 CFERAAEKCHVDKLTSVVGSCAWGKHVSVGTGSPFEILWDTRKTDLNPDKELDVYGFLHL 1250

Query: 1437 VNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKD 1616
            VN  S P DMGTSC+G EI+DLDQE   M+F+LSP RE GLEK TF+D  EFG+N +  +
Sbjct: 1251 VNG-SVPLDMGTSCIGTEIEDLDQE--LMDFELSPEREPGLEKPTFDDEHEFGMNSN--E 1305

Query: 1617 GFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAE------ENQDNSAWG 1748
            G ++   +   SWG  V  + NDW    E + +        +N++  +WG
Sbjct: 1306 GVTEVKGSW-SSWGNVVAPDTNDWSNKVESTGWGSAVNSELKNKNEDSWG 1354


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  713 bits (1841), Expect = 0.0
 Identities = 377/618 (61%), Positives = 440/618 (71%), Gaps = 36/618 (5%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNS-ANIASEFCAGDPVG 179
            RGLTEPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQFEYG +  +N+ SEFCAGDPVG
Sbjct: 774  RGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVG 833

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        WEMMKEILLCGV+FKND SDRRVILYLN+C C R 
Sbjct: 834  VLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRG 893

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQS 530
            +C+E AA +VKNHL KV LKD A EFLIEY  +     + E   G +GHI LN+  L   
Sbjct: 894  YCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENL 953

Query: 531  NISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWR 710
             IS+ ++ E+CQ+ I+  QKKKK+ NLFK I L                 + PC++F W 
Sbjct: 954  GISVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWP 1013

Query: 711  EAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGEL 890
            +A  D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANI WISPD  SWIRSPSK  +GEL
Sbjct: 1014 DASDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGEL 1073

Query: 891  ALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQ 1070
            ALDI+LEKEAVK+ GDAWR+LMD CLP+IHL+DT RSIPYAIKQV EL+GISCAFEQAV+
Sbjct: 1074 ALDIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVK 1133

Query: 1071 RLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTP 1250
            RLSTSVTMVTKGVLKDHL+LLANSMTC+G  +GFN GGIK+LSRSL VQ+PF  ATLFTP
Sbjct: 1134 RLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTP 1193

Query: 1251 RKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFL 1430
            RKCFERAAEKCHVD+LSSIVASC+WGKHV VGTGS FE+L NT   E       D Y+FL
Sbjct: 1194 RKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFL 1253

Query: 1431 HMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLN--- 1601
            H+V + S  E  GTSCLGAEID+L+++ D M   LSP R+SG E  TFED  EF  N   
Sbjct: 1254 HLVRNTSAQEVEGTSCLGAEIDELEEDED-MGLYLSPNRDSGSEMPTFEDRAEFDYNENL 1312

Query: 1602 ---------------GDDKDGFS-----------KQDANEPDS---WGKKVNSEENDWMK 1694
                           G  K G S           ++  N+ DS   WGKKV+  EN+   
Sbjct: 1313 DEGKPSGSAWEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKKVDEPENN--- 1369

Query: 1695 IGEQSTYAEENQDNSAWG 1748
              +QS   E++   S+WG
Sbjct: 1370 -RQQSGSGEQSGSWSSWG 1386


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  697 bits (1800), Expect = 0.0
 Identities = 372/618 (60%), Positives = 432/618 (69%), Gaps = 36/618 (5%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNS-ANIASEFCAGDPVG 179
            RGLTEPGTLF NLMAILRDVVICYDGTVRN  SNSIIQFEYG +  +N+ SEFCAGDPVG
Sbjct: 325  RGLTEPGTLFXNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVG 384

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKA LD        WEMMKEILLCGV+FKND SDRRVILYLN+C C R 
Sbjct: 385  VLAATAMSNPAYKAXLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRG 444

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQS 530
            +C+E AA +VKNHL KV LKD A EFLIEY  +     + E   G +GHI LN+  L   
Sbjct: 445  YCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENL 504

Query: 531  NISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWR 710
             IS+ ++ E+CQ+ I+  + KKK+ NLFK I L                 + PC++F W 
Sbjct: 505  GISVLEVHERCQENISSFRXKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWP 564

Query: 711  EAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGEL 890
            +A  D+LE+ SH+L D + P+L  T+IKGDPRVS+ANI WISPD  SWIRSPSK  +GEL
Sbjct: 565  DASDDHLERVSHILADMIXPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGEL 624

Query: 891  ALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQ 1070
            ALDI+LEKEAVK  GDAWR LMD CLP+IHL+DT RSIPYAIKQV EL+GISCAFEQAV 
Sbjct: 625  ALDIVLEKEAVKXRGDAWRXLMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVX 684

Query: 1071 RLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTP 1250
            RLSTSVTMVTKGVLKDHL+LLANSMTC+G  +GFN GGIK+LSRSL VQ+PF  ATLFTP
Sbjct: 685  RLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTP 744

Query: 1251 RKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFL 1430
            RKCFERAAEKCHVD+LSSIVASC+WGKHV VGTGS FE+L NT   E       D Y+FL
Sbjct: 745  RKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFL 804

Query: 1431 HMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLN--- 1601
            H+V + S  E  GTSCLGAEID+L+++ D M   LSP R+SG E  TFED  EF  N   
Sbjct: 805  HLVRNTSAQEVEGTSCLGAEIDELEEDED-MGLYLSPNRDSGSEMPTFEDRAEFDYNENL 863

Query: 1602 ---------------GDDKDGFS-----------KQDANEPD---SWGKKVNSEENDWMK 1694
                           G  K G S           ++  N+ D   SWGKKV+  EN+   
Sbjct: 864  DEGKPSGSAWEEASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSSWGKKVDEPENN--- 920

Query: 1695 IGEQSTYAEENQDNSAWG 1748
              +QS   E++   S WG
Sbjct: 921  -RQQSGSGEQSGSWSPWG 937


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  683 bits (1763), Expect = 0.0
 Identities = 349/602 (57%), Positives = 428/602 (71%), Gaps = 20/602 (3%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPVG 179
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV +      F  AG+PVG
Sbjct: 834  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVG 893

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        WE+MKEILLC VNFKND  DRRVILYLN+CDCGRK
Sbjct: 894  VLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRK 953

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQS 530
            +C+ENAA +VKN LKK SLKDTA+EF+IEY  Q       E   G VGHIHLNK LL   
Sbjct: 954  YCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDL 1013

Query: 531  NISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWR 710
            N+SM ++ +KC++ IN  +KKK V   FK I L                +D+PC+ F W+
Sbjct: 1014 NVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQ 1073

Query: 711  EAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGEL 890
              + DNLE+  H+L   +CPVL QTIIKGD RV T NI+WISPD  +WIR+P K  KGEL
Sbjct: 1074 GNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGEL 1133

Query: 891  ALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQ 1070
            ALDI+LEK AVK+ GDAWR+++D CLP++HL+DT+RSIPYAIKQV ELLGISCAF+QAVQ
Sbjct: 1134 ALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQ 1193

Query: 1071 RLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTP 1250
            RLS SVTMV KGVLK+HL+LLANSMTC+G  IGFN+GG K+LSR+L +QVPF  ATLFTP
Sbjct: 1194 RLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTP 1253

Query: 1251 RKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFL 1430
            RKCFE+A+EKCH D+LSSIVASC+WGKHVTVGTGS F++LW+T +     +  +D Y+FL
Sbjct: 1254 RKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFL 1313

Query: 1431 HMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF------ 1592
            H+V S S  ++  T+CLGAE++DL  E++ +E  +SP   S  EK  FED  EF      
Sbjct: 1314 HLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQNTWEN 1373

Query: 1593 ---GLNGD---DKDGFSKQDANEPDSWGK----KVNSEENDWMKIGEQSTYAEENQDNSA 1742
               G  GD   +++  +     +P +W      KV  ++    +  ++S+ +    D   
Sbjct: 1374 HVPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRSAGWDDKGT 1433

Query: 1743 WG 1748
            WG
Sbjct: 1434 WG 1435


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  683 bits (1763), Expect = 0.0
 Identities = 349/602 (57%), Positives = 428/602 (71%), Gaps = 20/602 (3%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPVG 179
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV +      F  AG+PVG
Sbjct: 774  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVG 833

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        WE+MKEILLC VNFKND  DRRVILYLN+CDCGRK
Sbjct: 834  VLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRK 893

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQS 530
            +C+ENAA +VKN LKK SLKDTA+EF+IEY  Q       E   G VGHIHLNK LL   
Sbjct: 894  YCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDL 953

Query: 531  NISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWR 710
            N+SM ++ +KC++ IN  +KKK V   FK I L                +D+PC+ F W+
Sbjct: 954  NVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQ 1013

Query: 711  EAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGEL 890
              + DNLE+  H+L   +CPVL QTIIKGD RV T NI+WISPD  +WIR+P K  KGEL
Sbjct: 1014 GNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGEL 1073

Query: 891  ALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQ 1070
            ALDI+LEK AVK+ GDAWR+++D CLP++HL+DT+RSIPYAIKQV ELLGISCAF+QAVQ
Sbjct: 1074 ALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQ 1133

Query: 1071 RLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTP 1250
            RLS SVTMV KGVLK+HL+LLANSMTC+G  IGFN+GG K+LSR+L +QVPF  ATLFTP
Sbjct: 1134 RLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTP 1193

Query: 1251 RKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFL 1430
            RKCFE+A+EKCH D+LSSIVASC+WGKHVTVGTGS F++LW+T +     +  +D Y+FL
Sbjct: 1194 RKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFL 1253

Query: 1431 HMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF------ 1592
            H+V S S  ++  T+CLGAE++DL  E++ +E  +SP   S  EK  FED  EF      
Sbjct: 1254 HLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQNTWEN 1313

Query: 1593 ---GLNGD---DKDGFSKQDANEPDSWGK----KVNSEENDWMKIGEQSTYAEENQDNSA 1742
               G  GD   +++  +     +P +W      KV  ++    +  ++S+ +    D   
Sbjct: 1314 HVPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRSAGWDDKGT 1373

Query: 1743 WG 1748
            WG
Sbjct: 1374 WG 1375


>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao]
          Length = 1675

 Score =  679 bits (1751), Expect = 0.0
 Identities = 347/592 (58%), Positives = 421/592 (71%), Gaps = 10/592 (1%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+N A    +F AG+PVGV
Sbjct: 775  RGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGV 833

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAATAMSNPAYKAVLD        WE+MKEILLC V+ KND  DRRVILYL +CDCGRK+
Sbjct: 834  LAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKY 893

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISM 542
            CQENAA +VKNHL+KV LKDTA+E + EY+ Q    E   G VGHI LNK +L + NISM
Sbjct: 894  CQENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLVGHILLNKAVLKELNISM 953

Query: 543  HDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKI 722
             ++  KCQ+ I   +KKKK A+ FK  DL               W D+ C+ F  R  K 
Sbjct: 954  QEVHMKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRNTKD 1013

Query: 723  DNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDI 902
            D+L+     L D + PVL +T+IKGDPR+ +ANI+W+SPD  +WIRSPSK  KGELALD+
Sbjct: 1014 DHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDV 1073

Query: 903  ILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLST 1082
            +LEK AVK++GDAWR ++DCCLP+I+L+DTQRSIPYAIKQV ELLGISCAFEQAVQRLST
Sbjct: 1074 VLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLST 1133

Query: 1083 SVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCF 1262
            SV+MV +GVLK+HL+LLANSMTC+G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCF
Sbjct: 1134 SVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCF 1193

Query: 1263 ERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVN 1442
            ERAAEKCHVD+LSSIVASC+WGKHV VGTGS F++LW+  +        +D YNFLHM++
Sbjct: 1194 ERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLS 1253

Query: 1443 SRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGF 1622
            S S P    T+CLG E+DDL   ++  E+ LSP   +GL+K  FED  +F  + D +   
Sbjct: 1254 SASGPSST-TTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAE 1312

Query: 1623 SKQDA----------NEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWG 1748
            S  +           N   +W KK  +E+ D  K     T   +  D   WG
Sbjct: 1313 SSWEKGVSLDKVSSWNVSSAWNKK--AEDGD--KFAAALTSTTKQSDWCDWG 1360


>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  679 bits (1751), Expect = 0.0
 Identities = 347/592 (58%), Positives = 421/592 (71%), Gaps = 10/592 (1%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+N A    +F AG+PVGV
Sbjct: 775  RGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGV 833

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAATAMSNPAYKAVLD        WE+MKEILLC V+ KND  DRRVILYL +CDCGRK+
Sbjct: 834  LAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKY 893

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISM 542
            CQENAA +VKNHL+KV LKDTA+E + EY+ Q    E   G VGHI LNK +L + NISM
Sbjct: 894  CQENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLVGHILLNKAVLKELNISM 953

Query: 543  HDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKI 722
             ++  KCQ+ I   +KKKK A+ FK  DL               W D+ C+ F  R  K 
Sbjct: 954  QEVHMKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRNTKD 1013

Query: 723  DNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDI 902
            D+L+     L D + PVL +T+IKGDPR+ +ANI+W+SPD  +WIRSPSK  KGELALD+
Sbjct: 1014 DHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDV 1073

Query: 903  ILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLST 1082
            +LEK AVK++GDAWR ++DCCLP+I+L+DTQRSIPYAIKQV ELLGISCAFEQAVQRLST
Sbjct: 1074 VLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLST 1133

Query: 1083 SVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCF 1262
            SV+MV +GVLK+HL+LLANSMTC+G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCF
Sbjct: 1134 SVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCF 1193

Query: 1263 ERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVN 1442
            ERAAEKCHVD+LSSIVASC+WGKHV VGTGS F++LW+  +        +D YNFLHM++
Sbjct: 1194 ERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLS 1253

Query: 1443 SRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGF 1622
            S S P    T+CLG E+DDL   ++  E+ LSP   +GL+K  FED  +F  + D +   
Sbjct: 1254 SASGPSST-TTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAE 1312

Query: 1623 SKQDA----------NEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWG 1748
            S  +           N   +W KK  +E+ D  K     T   +  D   WG
Sbjct: 1313 SSWEKGVSLDKVSSWNVSSAWNKK--AEDGD--KFAAALTSTTKQSDWCDWG 1360


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  664 bits (1714), Expect = 0.0
 Identities = 344/586 (58%), Positives = 413/586 (70%), Gaps = 4/586 (0%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            RGL+EPGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+    S F AG+PVGV
Sbjct: 774  RGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGV 833

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAATAMSNPAYKAVLD        WE+MKEILLC V+F ND  DRRVILYLN+C CGRK+
Sbjct: 834  LAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKY 893

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISM 542
            CQE AA +VKN LK+VSLKD A+EFLIEY+   +  + + G VGHIHLNK LL    ISM
Sbjct: 894  CQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISD-DEGLVGHIHLNKILLEDLRISM 952

Query: 543  HDILEKCQDAINI---QQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWRE 713
            HDIL KCQ+ +     ++K KKV   FKN  L                +++PC+ F  R 
Sbjct: 953  HDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCLMFVLRG 1012

Query: 714  AKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELA 893
            A    L+K S +L + + PVL +TIIKGDPR+ +ANI+WISPD  +WIR+PSK  KGELA
Sbjct: 1013 ASDSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWIRNPSKNRKGELA 1072

Query: 894  LDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQR 1073
            LD++LEK  VK+SGDAWR ++D CLP+ HL+DT+RS+PYAIKQV ELLG+SCAFEQAVQR
Sbjct: 1073 LDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQR 1132

Query: 1074 LSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPR 1253
            LS SVTMV KGVLK+HL+LLANSMTC+G  +GFN+GG K+LSRSL VQVPF  ATLFTPR
Sbjct: 1133 LSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFTPR 1192

Query: 1254 KCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLH 1433
            KCFE+AAEKCH DNLSS+VA+C+WGKHV VGTGS F++LW T   E   +  VD Y+FLH
Sbjct: 1193 KCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLH 1252

Query: 1434 MVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDK 1613
            MV S +  E+  T CLG E+D L+ E D   + LSP      +K  FED VE     D  
Sbjct: 1253 MVRSSTGIEESDTGCLGEEVDGLEDEFD---WSLSPEHNLCSDKPVFEDLVE-----DQS 1304

Query: 1614 DGFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEEN-QDNSAWG 1748
               +KQ+    DS      S E+ W K+G          +   AWG
Sbjct: 1305 WLENKQENANWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWG 1350


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  664 bits (1713), Expect = 0.0
 Identities = 342/594 (57%), Positives = 428/594 (72%), Gaps = 12/594 (2%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVG 179
            RGL+EPGTLFKNLMA LRDVVICYDGTVRN CSNSIIQFEYGV S +     F AG+PVG
Sbjct: 773  RGLSEPGTLFKNLMATLRDVVICYDGTVRNVCSNSIIQFEYGVKSGSGPENLFPAGEPVG 832

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        W++MKEILLC VNFKN+  DRRV+LYLN+C CGRK
Sbjct: 833  VLAATAMSNPAYKAVLDSTPSSNSSWDLMKEILLCKVNFKNELIDRRVVLYLNDCGCGRK 892

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM--HEEGNPGPVGHIHLNKTLLIQSN 533
            +C+E+AA +VKN LKKVSLKDTA+EF+IEY+ +      E + G VGH+HLN+ LL + N
Sbjct: 893  YCREHAAYLVKNRLKKVSLKDTAVEFMIEYQKERAAGSMEIDSGLVGHVHLNEMLLRELN 952

Query: 534  ISMHDILEKCQDAINIQQKKK-----KVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQ 698
            + M +IL+KC++ IN  ++KK      +  +FK   L                +  PC+ 
Sbjct: 953  LGMSEILQKCEETINSFRRKKVGKKMNIGEIFKRTILSYSECCSFHQSSADNRSGSPCLM 1012

Query: 699  FCWREAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGP 878
            F +++     LE  S +L D +CPVL +T+IKGDPR+S+ANI+WI+ +  +WIRSP+K  
Sbjct: 1013 FFYQDFNNSELEAISQMLADFICPVLLKTVIKGDPRISSANIIWINSESTTWIRSPNKSL 1072

Query: 879  KGELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFE 1058
            KGELALD++LEK  VK+SGDAWR+ +DCCLP++HL+DT+RSIPYAIKQV ELLG+SCAF+
Sbjct: 1073 KGELALDVVLEKSVVKQSGDAWRIALDCCLPVLHLIDTRRSIPYAIKQVQELLGVSCAFD 1132

Query: 1059 QAVQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNAT 1238
            QAVQRL+ +V MV KGVLK+HL+LLANSMTC+G F+GFN GG K+LSR+L +QVPF  AT
Sbjct: 1133 QAVQRLAKAVAMVAKGVLKEHLILLANSMTCAGNFVGFNPGGYKALSRALNIQVPFTEAT 1192

Query: 1239 LFTPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDA 1418
            LFTP+KCFERAAEKCH+D+LSSIVASC+WGKHV VGTGS FEILW+T +  L     VD 
Sbjct: 1193 LFTPKKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFEILWDTKEGGLNEVGGVDV 1252

Query: 1419 YNFLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGL 1598
            +NFLHMVN+ +  E++ T+ LG EIDDL  + +  +  LSP   S  +K  FED VEF  
Sbjct: 1253 FNFLHMVNA-ANGEELTTAALGTEIDDLVPDYENGDVSLSPEHNSSSDKPVFEDIVEFPD 1311

Query: 1599 NGDDKDGFSKQDANEPDSWGKKVNSEENDW--MKIGEQSTYAEENQ--DNSAWG 1748
            N ++  G S  D+    S G K      DW  +KIG Q   + E Q    SAWG
Sbjct: 1312 NFENVPGKSSWDSIYTASTGGK------DWGAVKIGTQDGISAETQADSTSAWG 1359


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  660 bits (1702), Expect = 0.0
 Identities = 335/533 (62%), Positives = 404/533 (75%), Gaps = 3/533 (0%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVG 179
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQFEYGV       S F AG+PVG
Sbjct: 780  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAGEPVG 839

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        W+MMKEILLC V FKND +DRRVILYLN+C CGR 
Sbjct: 840  VLAATAMSNPAYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRN 899

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEE--GNPGPVGHIHLNKTLLIQSN 533
            +CQE AA +VKNHL+KVSLKD A  F+IEY+SQ + E    + G VGH+HL+K  L   N
Sbjct: 900  YCQERAAYLVKNHLEKVSLKDIAKCFMIEYKSQQIPESFGSDAGLVGHVHLDKRKLQDLN 959

Query: 534  ISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWRE 713
            I+   ILEKCQ+ +N  +KKKKV NLFK   L                 + PC+ F W+ 
Sbjct: 960  ITAQVILEKCQETVNTFRKKKKVGNLFKKTILLVSESCSFQQCID----ESPCLMFFWQG 1015

Query: 714  AKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELA 893
            A   +LE+ S++L D +CPVL +TIIKGD R+S ANI+W +P+  +WIR+PS+  KGELA
Sbjct: 1016 ADDVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETNTWIRNPSRTQKGELA 1075

Query: 894  LDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQR 1073
            LDI+LEK  VKKSGDAWR+++D CLP++HL++T RSIPYAIKQV ELLG+SCAF+ AVQR
Sbjct: 1076 LDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQR 1135

Query: 1074 LSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPR 1253
            LS SVTMV KGVLK+HL+LL NSMTC+G+ IGF TGG K+LSRSL +QVPF  ATLFTPR
Sbjct: 1136 LSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPR 1195

Query: 1254 KCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLH 1433
            KCFE+AAEKCH D+LSSIVASCAWGKHVTVGTGS F++LW+T +A L P   +D Y+FL+
Sbjct: 1196 KCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDVYSFLN 1255

Query: 1434 MVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF 1592
            MV S +  E+  T+CLGAE+DDL  E++  +++LSP   S  +K TFED  EF
Sbjct: 1256 MVRSTAGGEESVTACLGAEVDDLMLEDE--DWNLSPEHNSSSDKPTFEDSAEF 1306


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  659 bits (1701), Expect = 0.0
 Identities = 342/586 (58%), Positives = 412/586 (70%), Gaps = 4/586 (0%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            RGL+EPGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+    S F AG+PVGV
Sbjct: 775  RGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGV 834

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAATAMSNPAYKAVLD        WE+MKEILLC V+F ND  DRRVILYLN+C CGRK+
Sbjct: 835  LAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKY 894

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISM 542
            CQE AA +VKN LK+VSLKD A+EFLIEY+   +  + + G VGHIHLNK LL    ISM
Sbjct: 895  CQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISD-DEGLVGHIHLNKILLEDLRISM 953

Query: 543  HDILEKCQDAINI---QQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWRE 713
            HDIL KCQ+ +     ++K KKV   FKN  L                +++PC+ F  R 
Sbjct: 954  HDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFVLRG 1013

Query: 714  AKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELA 893
            A    L+K S +L + + PVL +TIIKGDPR+ +ANI+WISPD  +WIR+PSK  KGELA
Sbjct: 1014 ASDSYLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSKNRKGELA 1073

Query: 894  LDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQR 1073
            LD++LEK  VK+SGDAWR ++D CLP+ HL+DT+RS+PYAIKQV ELLG+SCAFEQAVQR
Sbjct: 1074 LDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQR 1133

Query: 1074 LSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPR 1253
            LS SVTMV KGVLK+HL+LLANSMTC+G  +GFN+GG K+LSRSL VQVPF  ATLF PR
Sbjct: 1134 LSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFMPR 1193

Query: 1254 KCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLH 1433
            KCFE+AAEK H DNLSS+VA+C+WGKHV VGTGS F++LW T   E   +  VD Y+FLH
Sbjct: 1194 KCFEKAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLH 1253

Query: 1434 MVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDK 1613
            MV S +  E++ T CLG E+D L+ E D   + LSP      +K  FED VE     D  
Sbjct: 1254 MVRSSTGIEELDTGCLGEEVDGLEDEFD---WSLSPEHNLCSDKPIFEDLVE-----DQS 1305

Query: 1614 DGFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEEN-QDNSAWG 1748
               +KQ+    DS      S E+ W K+G          +   AWG
Sbjct: 1306 WLENKQENENWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWG 1351


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  654 bits (1686), Expect = 0.0
 Identities = 330/594 (55%), Positives = 421/594 (70%), Gaps = 13/594 (2%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            +GL EPGTLFKNLMA+LRDVVICYDGTVRN  SNS+IQFEYGV      + F AGDPVGV
Sbjct: 574  KGLAEPGTLFKNLMAVLRDVVICYDGTVRNISSNSVIQFEYGVGGMQSQNLFPAGDPVGV 633

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAATAMSNPAYKAVLD        W+MMKEIL C  NF+ND +DRRVILYLN+C CGRK+
Sbjct: 634  LAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRANFRNDINDRRVILYLNDCCCGRKY 693

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEG---NPGPVGHIHLNKTLLIQSN 533
            CQENA+ +VKNHLKKVSL+D AIE  IEY+   +  E    + G VGHIHLN  LL  S 
Sbjct: 694  CQENASCLVKNHLKKVSLRDAAIELAIEYKRPKLEPESCEIDAGLVGHIHLNSGLLKASG 753

Query: 534  ISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWRE 713
            I MHDIL+KC++ +N+ +KKKK    FK I L               WTD+PC++F W++
Sbjct: 754  IGMHDILQKCEEQVNLLRKKKKYGYHFKRI-LLSVSDCCFFNHSDSKWTDMPCLKFFWQD 812

Query: 714  AKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELA 893
                +LE+  H++ D +CPVL  TIIKGDPR+ST NI+WI+P   +W++SP    KGELA
Sbjct: 813  MTDTDLERTKHIMADMICPVLLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSSTKGELA 872

Query: 894  LDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQR 1073
            +++ LEKEAV+ +GDAWR+++DCCLP+ HL+DT+RSIPYAIKQ+ +L GISCAF+QAVQR
Sbjct: 873  VEVALEKEAVRLTGDAWRIVLDCCLPVFHLIDTRRSIPYAIKQIQDLFGISCAFDQAVQR 932

Query: 1074 LSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPR 1253
            LSTSVTMVTKGVLK+HLLLLA+SMTC+G  +GFNT GIK+L R+L VQVPF  ATL+TPR
Sbjct: 933  LSTSVTMVTKGVLKEHLLLLASSMTCAGNLVGFNTSGIKALCRALNVQVPFTEATLYTPR 992

Query: 1254 KCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLH 1433
            KCFERA+EKCHVD L+SIV SC+WGK V++GTG+ F++LW T + E+  +K  D YNFLH
Sbjct: 993  KCFERASEKCHVDTLASIVGSCSWGKRVSIGTGAKFDLLWETKEIEM-ADKPTDVYNFLH 1051

Query: 1434 MVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDK 1613
            +V+S ++ E++ +  LG +I+  +++  +ME  LSP +E+   K  FE+ +E G++ D  
Sbjct: 1052 LVSSANE-EEVDSGGLGEDIESFEKD-VYMEPALSPEQEN---KAVFEETLEIGVDSDIT 1106

Query: 1614 DG-FSKQDANEPDSWGKKVN-------SEENDWMKIGEQSTYA--EENQDNSAW 1745
                S  DA      G   N       S E  W   G +   A  E++     W
Sbjct: 1107 GADESSWDAFPSSGTGWNANKIDTGSGSAEGGWSSWGSKKDQANPEDSSKTGGW 1160


>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  652 bits (1682), Expect = 0.0
 Identities = 338/575 (58%), Positives = 415/575 (72%), Gaps = 13/575 (2%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVG 179
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGVN  +     F AG+PVG
Sbjct: 776  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVG 835

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        WE+MKEILLC VNFKN+  DRRVILYLNNC CGRK
Sbjct: 836  VLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRK 895

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEG---NPGPVGHIHLNKTLLIQS 530
            +C+E AA +VKN LKKVSLKDTA+EF+IEY +Q+        + G VGHIHLN+ +L + 
Sbjct: 896  YCRERAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGLVGHIHLNEDMLREL 955

Query: 531  NISMHDILEKCQDAIN------IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPC 692
            NI +HDIL+KCQ+ IN      + +KK  +   FKN  L                +D PC
Sbjct: 956  NIGVHDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSCAEKRSDSPC 1015

Query: 693  IQFCWREAKIDNLEKASHL--LDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSP 866
            + F  +    D+LE  + L    D +CPVL +TIIKGDPR+ +ANI+WI PD  +WIRSP
Sbjct: 1016 LMFFLQAT--DDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSP 1073

Query: 867  SKGPKGELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGIS 1046
            +K  KGE ALDI+LEK  +K+SGDAWR ++D CLP++HL+DT+RSIPYAIKQ+ ELLG+S
Sbjct: 1074 NKSQKGEWALDIVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVS 1133

Query: 1047 CAFEQAVQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPF 1226
            CAF+QAVQRLST+VTMV KGVLK+HL+LLANSMTC+G F+GFN+ G K+LSR+L +QVPF
Sbjct: 1134 CAFDQAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPF 1193

Query: 1227 MNATLFTPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNK 1406
              ATLFTPRKCFERAAEKCH+D+L+SIVASC+WGKHV VGTG  F++LW+T + EL    
Sbjct: 1194 TEATLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVELTQEG 1253

Query: 1407 EVDAYNFLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGV 1586
             +D +NFLHMV S +  E+  T  LGAE+DDL   ++  +   SP   S  ++  FED V
Sbjct: 1254 GLDVFNFLHMV-STANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLV 1312

Query: 1587 EFGLNGDDKDGFSKQDAN-EPDSWGKKVNSEENDW 1688
            EF    DDK G   + +N E DS     ++   DW
Sbjct: 1313 EF----DDKLGDLPEKSNWEKDSSFHTDSNGGKDW 1343


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  652 bits (1682), Expect = 0.0
 Identities = 339/604 (56%), Positives = 428/604 (70%), Gaps = 23/604 (3%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIA--SEFCAGDPV 176
            RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYG+ +  +   S F  G+PV
Sbjct: 774  RGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPV 833

Query: 177  GVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGR 356
            GVLAATAMS PAYKAVLD        W+MMKEILLC V+FKN+  DRRVILYLNNC CGR
Sbjct: 834  GVLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGR 893

Query: 357  KHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNI 536
            K+C ENAA +VK+HLKKV+LKD A++F+IEY  Q       PG VGH+HLN+ LL + NI
Sbjct: 894  KYCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQPTPSGLGPGLVGHVHLNRMLLKELNI 953

Query: 537  SMHDILEKCQDAIN-IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWRE 713
             M ++L +CQ+ ++  ++KKKK+A+  +                     D+PC+ F W +
Sbjct: 954  DMTEVLRRCQETMSSFKKKKKKIAHALR---FSISEHCAFHQWNGEESIDMPCLIF-WHQ 1009

Query: 714  AKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELA 893
             +  +LE+ +H+L D V P+L +TIIKGDPR+ +A+++WISPD  SW ++PS+   GELA
Sbjct: 1010 TRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGELA 1069

Query: 894  LDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQR 1073
            LD+ LEK AVK++GDAWR ++DCCLP++HL+DT+RS+PYAIKQV ELLGISCAF+Q +QR
Sbjct: 1070 LDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQR 1129

Query: 1074 LSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPR 1253
            LS SV+MV+KGVL DHL+LLANSMTC+G  IGFN+GG K+LSR+L +QVPF  ATLFTPR
Sbjct: 1130 LSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPR 1189

Query: 1254 KCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLH 1433
            KCFE+AAEKCH D+LSSIVASC+WGKHV VGTGS F+ILW+  +   + +  VD YNFLH
Sbjct: 1190 KCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLH 1249

Query: 1434 MVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDK 1613
            MV S  K E+  ++CLG EI+D+  E+++ E  LSP   S  EK  FED  EF    D+ 
Sbjct: 1250 MVRS-GKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNY 1308

Query: 1614 DGFSKQDAN-------------EPDSWGKKVNSEE-NDWMKIGEQS------TYAEENQD 1733
             G SK +               E +  GK  NS + NDW   G ++      T A+EN  
Sbjct: 1309 PGESKWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGWGRKAEPDVTVTNAQENTS 1368

Query: 1734 NSAW 1745
            NSAW
Sbjct: 1369 NSAW 1372


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  641 bits (1653), Expect = 0.0
 Identities = 326/597 (54%), Positives = 427/597 (71%), Gaps = 16/597 (2%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVG 179
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ + +     F AG+PVG
Sbjct: 778  RGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKTEHLFPAGEPVG 837

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        WE+MKEILLC VNF+N+  DRRVILYLN+CDCG  
Sbjct: 838  VLAATAMSNPAYKAVLDASPNSNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGGS 897

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEY---RSQMMHEEGNPGPVGHIHLNKTLLIQS 530
             C+ENAA  VKN L+KVSLK+ A+EF+IEY   R+Q  + E + G VGHI+L++ +L + 
Sbjct: 898  CCRENAAYSVKNQLRKVSLKNAAVEFIIEYQQQRTQKENSETDAGLVGHIYLDEMMLEEL 957

Query: 531  NISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWR 710
             ISM ++ EKC + +    +KKKV    KNI+L                   PC+ F W 
Sbjct: 958  KISMANVFEKCLERLKSFSRKKKVNQYLKNIELSFSESCSSSHPA------APCLTF-WL 1010

Query: 711  EAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGEL 890
            +    +L+ A  +L + +CPVLF+TIIKGDPR+S+A+I+W+SPD  +W+R+P K   GEL
Sbjct: 1011 KNHDSDLDNAVKVLSENICPVLFETIIKGDPRISSASIIWVSPDTNTWVRNPYKSSNGEL 1070

Query: 891  ALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQ 1070
            ALDI+LE+EAVK+SGDAWR+++D CLP++HL+DT+RSIPYAIKQ+ ELLGISC F+QA+Q
Sbjct: 1071 ALDIVLEEEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQ 1130

Query: 1071 RLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTP 1250
            R++ SV MV KGVL++HL+LLA+SMTC G  +GFNTGG K+LSR L +QVPF +ATLFTP
Sbjct: 1131 RVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLFTP 1190

Query: 1251 RKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFL 1430
            +KCFERAAEKCH D+LSSIVASC+WGKHV VGTGS F+I+W++ + +    + +D Y+FL
Sbjct: 1191 KKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIEGMDVYSFL 1250

Query: 1431 HMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDD 1610
            HMV S +  E+   +CLG +IDDL  E ++M+  +SP   SG E + FE+  E  LNG  
Sbjct: 1251 HMVKSVTNGEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAV-FEENPEV-LNGST 1307

Query: 1611 KDGF---SKQDANEPDSW---------GKKVNSEENDWMKIGEQSTYAEENQDNSAW 1745
             +G+   S Q  ++ + W         G+   ++EN W K   Q    E++  ++AW
Sbjct: 1308 SNGWDVSSNQTQSKTNEWSGWASSNKDGRSETAQENSWGKTVNQ----EDSSKSNAW 1360


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  640 bits (1652), Expect = 0.0
 Identities = 323/614 (52%), Positives = 427/614 (69%), Gaps = 32/614 (5%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVG 179
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ S + +   F AG+PVG
Sbjct: 778  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDKSQPLFPAGEPVG 837

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAAT+MSNPAYKAVLD        WE MKEILLC VNF+N+ +DRRVILYLN+CDCGR 
Sbjct: 838  VLAATSMSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRS 897

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNP--GPVGHIHLNKTLLIQSN 533
            +C+ENAA +VKN L+KVSLKD A++F +EY+ Q    +G+   G VGHIHLN+ +L +  
Sbjct: 898  YCRENAAYLVKNQLRKVSLKDAALDFTVEYQQQRRRNDGSEDAGLVGHIHLNEAMLEKLK 957

Query: 534  ISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWRE 713
            I+M ++ +KCQ+ +N   +KKKV + F+  +L                +  PC+   W +
Sbjct: 958  INMSEVYQKCQERLNSFSRKKKVFHFFRKTELFFSESCSSLN------SSAPCVTILWPD 1011

Query: 714  AKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELA 893
               D+L++ + +L D +CPVL  TII+GDPR+S+ANI+W++P   +W+R+PSK   GELA
Sbjct: 1012 G--DDLDQTTKVLADMICPVLLDTIIQGDPRISSANIIWVNPGTNTWVRNPSKSSNGELA 1069

Query: 894  LDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQR 1073
            LD+ILEKEAVK+SGDAWR+++D CLP++HL+DT+RS PYAIKQ+ ELLGISC F+QA+QR
Sbjct: 1070 LDVILEKEAVKQSGDAWRIILDSCLPVLHLIDTRRSTPYAIKQIQELLGISCTFDQAIQR 1129

Query: 1074 LSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPR 1253
            L+ SV MV KGVL++HL+LLA+SMTC G  +GFNTGG K+L+R L +QVPF +ATLFTPR
Sbjct: 1130 LAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKTLARQLNIQVPFTDATLFTPR 1189

Query: 1254 KCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLH 1433
            KCFERAAEK H D+LSSIVASC+WGKHV VGTGS F+I+W+  + +    + +D YNFL+
Sbjct: 1190 KCFERAAEKRHADSLSSIVASCSWGKHVAVGTGSRFDIVWDPKEVKSNEIEGMDVYNFLN 1249

Query: 1434 MVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDK 1613
            MV   +  ++   +CLG +IDDL  ++D M++ +SP   SG + + F++  E  LNG   
Sbjct: 1250 MVKGLANGDEENNACLGEDIDDL-LDDDNMDWGMSPEHTSGFDAV-FDESFEL-LNGSTS 1306

Query: 1614 DGF-SKQDAN----------------------EPDSWGK------KVNSEENDWMKIGEQ 1706
            +G+ S +D N                      E D WG       K +  + D  K G  
Sbjct: 1307 NGWDSNKDQNKTTTNDWSGWGQNKSEIQVDVAETDQWGSGSTQKWKADITKEDSSKSGAW 1366

Query: 1707 STYAEENQDNSAWG 1748
             T   +N D  +WG
Sbjct: 1367 ETGTNQNSDQPSWG 1380


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  633 bits (1633), Expect = e-179
 Identities = 327/617 (52%), Positives = 426/617 (69%), Gaps = 35/617 (5%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVG 179
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ + + +   F AG+PVG
Sbjct: 778  RGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSEHLFPAGEPVG 837

Query: 180  VLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRK 359
            VLAATAMSNPAYKAVLD        WE+MKEILLC VNF+N+  DRRVILYLN+CDCG  
Sbjct: 838  VLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVILYLNDCDCGGS 897

Query: 360  HCQENAALIVKNHLKKVSLKDTAIEFLIEY---RSQMMHEEGNPGPVGHIHLNKTLLIQS 530
            +C+ENAA  VK+ L+KVSLKD A+EF+IEY   R+Q  + E + G VGHI+L++ +L + 
Sbjct: 898  YCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHIYLDEMMLEEL 957

Query: 531  NISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWR 710
             ISM  + +KC + +    +KKKV    KNI+L                   PC+ F W 
Sbjct: 958  KISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSESCSSSHPA------APCLTF-WL 1010

Query: 711  EAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGEL 890
            +    +L+ A  +L + +CPVLF+TII+GDPR+S+A+I+W+SPD  +W+R+P K   GEL
Sbjct: 1011 KNYDSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYKSSNGEL 1070

Query: 891  ALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQ 1070
            ALDIILEKEAVK+SGDAWRV++D CLP++HL+DT+RSIPYAIKQ+ ELLGISC F+QA+Q
Sbjct: 1071 ALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQ 1130

Query: 1071 RLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTP 1250
            R++ SV MV KGVL++HL+LLA+SMTC G  +GFN GG K+LSR L +QVPF +ATLFTP
Sbjct: 1131 RVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLFTP 1190

Query: 1251 RKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFL 1430
            +KCFERAAEKCH D+LSSIVASC+WGKHV VGTGS F+++W+  + +    + +D Y+FL
Sbjct: 1191 KKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYSFL 1250

Query: 1431 HMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDD 1610
            HMV S +  E+   +CLG +IDDL  E ++M+  +SP   SG E + FE+  E  LNG  
Sbjct: 1251 HMVKSFTNGEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAV-FEENPEV-LNGST 1307

Query: 1611 KDGF---------------------------SKQDANEPDSWGKKVNSEENDWMKIGEQS 1709
             +G+                            + +    +SWGK VN E++        S
Sbjct: 1308 SNGWDVSSNQGESKTNEWSGWASSNKAEIKDGRSEIAPKNSWGKTVNQEDSSKSNPWSTS 1367

Query: 1710 TYAEENQDN----SAWG 1748
            T A++ +      SAWG
Sbjct: 1368 TIADQTKTKSNEWSAWG 1384


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  632 bits (1631), Expect = e-178
 Identities = 339/634 (53%), Positives = 428/634 (67%), Gaps = 53/634 (8%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIA--SEFCAGDPV 176
            RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYG+ +  +   S F  G+PV
Sbjct: 804  RGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPV 863

Query: 177  GVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGR 356
            GVLAATAMS PAYKAVLD        W+MMKEILLC V+FKN+  DRRVILYLNNC CGR
Sbjct: 864  GVLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGR 923

Query: 357  KHCQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKT--LLIQS 530
            K+C ENAA +VK+HLKKV+LKD A++F+IEY  Q       PG VGH+HLN+   LL + 
Sbjct: 924  KYCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQPTPSGLGPGLVGHVHLNRVRMLLKEL 983

Query: 531  NISMHDILEKCQDAIN-IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCW 707
            NI M ++L +CQ+ ++  ++KKKK+A+  +                     D+PC+ F W
Sbjct: 984  NIDMTEVLRRCQETMSSFKKKKKKIAHALR---FSISEHCAFHQWNGEESIDMPCLIF-W 1039

Query: 708  REAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGE 887
             + +  +LE+ +H+L D V P+L +TIIKGDPR+ +A+++WISPD  SW ++PS+   GE
Sbjct: 1040 HQTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGE 1099

Query: 888  LALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAV 1067
            LALD+ LEK AVK++GDAWR ++DCCLP++HL+DT+RS+PYAIKQV ELLGISCAF+Q +
Sbjct: 1100 LALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMI 1159

Query: 1068 QRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLF- 1244
            QRLS SV+MV+KGVL DHL+LLANSMTC+G  IGFN+GG K+LSR+L +QVPF  ATLF 
Sbjct: 1160 QRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFV 1219

Query: 1245 ---------------------------TPRKCFERAAEKCHVDNLSSIVASCAWGKHVTV 1343
                                       TPRKCFE+AAEKCH D+LSSIVASC+WGKHV V
Sbjct: 1220 SPFHSLVLSLYMKFNFFFLFFLNGXYTTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAV 1279

Query: 1344 GTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFM 1523
            GTGS F+ILW+  +   + +  VD YNFLHMV S  K E+  ++CLG EI+D+  E+++ 
Sbjct: 1280 GTGSRFDILWDQKELGCKQDDVVDVYNFLHMVRS-GKSEEPTSACLGEEIEDIMVEDEYG 1338

Query: 1524 EFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDAN-------------EPDSWGKK 1664
            E  LSP   S  EK  FED  EF    D+  G SK +               E +  GK 
Sbjct: 1339 ELTLSPEPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWESNENGKA 1398

Query: 1665 VNSEE-NDWMKIGEQS------TYAEENQDNSAW 1745
             NS + NDW   G ++      T A+EN  NSAW
Sbjct: 1399 TNSSDGNDWSGWGRKAEPDVTVTNAQENTSNSAW 1432


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  624 bits (1608), Expect = e-176
 Identities = 333/584 (57%), Positives = 415/584 (71%), Gaps = 7/584 (1%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            RGLTEPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG  SA   + + AG+PVGV
Sbjct: 777  RGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGRGSAR--NLYPAGEPVGV 834

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAATAMSNPAYKAVLD        WE+MKEILLC   F+N+  DRRVILYLN+C CGRK+
Sbjct: 835  LAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKAIFRNELIDRRVILYLNHCGCGRKY 894

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHE--EGNPGPVGHIHLNKTLLIQSNI 536
            C+E A  +V+N LKKVSLKDTA+EF+IEY++Q      + N G VGHIHLN+ LL + +I
Sbjct: 895  CREQATYLVQNQLKKVSLKDTAVEFMIEYKNQSSFSAVDMNAGLVGHIHLNEVLLKEMDI 954

Query: 537  SMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREA 716
             M++IL+KC++AIN  +KKK   +L K + L                ++ PC+    RE 
Sbjct: 955  GMNEILQKCEEAINSVRKKKLGKHLKKAV-LSVSECCTFHKSGLDGTSEFPCLLISIREN 1013

Query: 717  KIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELAL 896
              D LE++S +L D++CP L +TIIKGD R+S+A I W+S D  S IRSP     GELA+
Sbjct: 1014 MNDTLEESSKILADSICPFLLETIIKGDSRISSAKITWLSSDTTS-IRSPQNSDMGELAV 1072

Query: 897  DIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRL 1076
            D++L+K A+K+SGDAWR+++D CLP++HL+DT+RSIPY IKQ+ ELLGISCAF+QAVQRL
Sbjct: 1073 DVVLDKSAIKRSGDAWRIVIDSCLPVLHLIDTRRSIPYGIKQIQELLGISCAFDQAVQRL 1132

Query: 1077 STSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRK 1256
            STSV+MV+KGVLK+HL+LLANSMT +G  IGFN+GG K+L+RSL VQVPF  ATL TP++
Sbjct: 1133 STSVSMVSKGVLKEHLILLANSMTYAGNLIGFNSGGYKALTRSLNVQVPFTEATLITPKR 1192

Query: 1257 CFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHM 1436
            CFERAAEKCHVD+L+SIVASC+WGKHV VGTGS F+ILW+T K E      VD  NFLHM
Sbjct: 1193 CFERAAEKCHVDSLTSIVASCSWGKHVAVGTGSRFDILWDTRKVEFNQAGGVDVNNFLHM 1252

Query: 1437 VNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF-GLNGDDK 1613
            V S +  E+  T+CLG EIDDL   +D  E  LSP      ++  FED  EF  ++  D 
Sbjct: 1253 V-STAYGEEASTACLGEEIDDLMPGDDIAELCLSP-ENFNSDRPVFEDIDEFQDISEKDL 1310

Query: 1614 DGFSKQD----ANEPDSWGKKVNSEENDWMKIGEQSTYAEENQD 1733
             G S  D         S GK+  S  N   K    S++   N++
Sbjct: 1311 PGKSSWDNLSSFRSGSSSGKEWGSNNNVGTKYDVGSSWGTANKE 1354


>gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score =  618 bits (1593), Expect = e-174
 Identities = 315/599 (52%), Positives = 415/599 (69%), Gaps = 18/599 (3%)
 Frame = +3

Query: 3    RGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGV 182
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+        F AG+PVGV
Sbjct: 777  RGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGLEKTEHL--FPAGEPVGV 834

Query: 183  LAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKH 362
            LAATAMSNPAYKAVLD        WE+MKEILLC VNF+N+  DRRVILYLN+CDCG  +
Sbjct: 835  LAATAMSNPAYKAVLDASPNSNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGGNY 894

Query: 363  CQENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHE---EGNPGPVGHIHLNKTLLIQSN 533
            C+ENAA  VK+ L+KV+LKD A+EF+IEY+ Q + +   E + G VGHI+L++ +L +  
Sbjct: 895  CRENAAYKVKDQLRKVNLKDAAVEFVIEYQEQRIQKGNSETDAGLVGHIYLDEMMLEELK 954

Query: 534  ISMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWRE 713
            ISM  + +KC + +     +KK     K  +L                   PC+ F W E
Sbjct: 955  ISMAHVFQKCLERLKSFSPRKKANQFLKRTELSYSESCSSSHPA------APCLTFVWVE 1008

Query: 714  AKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELA 893
             + +  +    +L + +CPVL +TII+GDPR+S+A+I+W++PD  +W+R+P K   GELA
Sbjct: 1009 DRNNEFDYTVKILSEKICPVLLETIIQGDPRISSASIIWVTPDTNTWVRNPYKSSTGELA 1068

Query: 894  LDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQR 1073
            LDIILEKE VK+SGDAWR+++D CLP++HL+DT+RSIPYAIKQ  ELLGISC F+QA+QR
Sbjct: 1069 LDIILEKEVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQTQELLGISCTFDQAIQR 1128

Query: 1074 LSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPR 1253
            ++ SV MV KGVL++HL+LLA+SMTC G  +GFNTGG K+LSR L +QVPF +ATLFTP+
Sbjct: 1129 VAASVKMVAKGVLREHLILLASSMTCGGNMVGFNTGGYKALSRQLNIQVPFTDATLFTPK 1188

Query: 1254 KCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLH 1433
            KCFERAAEKCH D+LSSIVASC+WGK V VGTGS F+I+W+  K      + +D Y+FLH
Sbjct: 1189 KCFERAAEKCHTDSLSSIVASCSWGKPVAVGTGSKFDIVWDANKIRSSEIEGMDVYSFLH 1248

Query: 1434 MVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDK 1613
            MV  R+  E+   +CLG +IDDL +E + ++ ++SP R SG E + FE+  E  LN    
Sbjct: 1249 MVKGRTDREEETDACLGEDIDDLLEEEN-LDLEMSPPRNSGFEAV-FEENPEV-LNNSTS 1305

Query: 1614 DGF---SKQDANEPDSW------------GKKVNSEENDWMKIGEQSTYAEENQDNSAW 1745
            +G+   S Q  ++ + W            G+   ++E+ W K   Q    E++  +SAW
Sbjct: 1306 NGWDVNSSQTESKTNGWSGWVSNKAETNEGRSDRAQESSWGKTVTQ----EDSSKSSAW 1360