BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023279
         (555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3...   101   1e-19
gb|EXB51974.1| Cleavage and polyadenylation specificity factor C...   100   2e-19
gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus pe...    98   2e-18
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec...    96   4e-18
ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citr...    96   4e-18
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr...    96   4e-18
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002317344.2| hypothetical protein POPTR_0011s09210g [Popu...    94   2e-17
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...    93   4e-17
emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]    93   4e-17
ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation spec...    89   5e-16
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec...    87   3e-15
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec...    83   4e-14
ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation spec...    77   2e-12
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec...    77   2e-12
gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus...    75   1e-11
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...    74   2e-11
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec...    73   4e-11
ref|XP_004158090.1| PREDICTED: uncharacterized protein LOC101225...    72   1e-10
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec...    69   6e-10

>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma
           cacao]
          Length = 698

 Score =  101 bits (252), Expect = 1e-19
 Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 8/92 (8%)
 Frame = +2

Query: 107 KRDQKAPNGDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDE 262
           KRDQ+ P  DR        +  EM G  G   DE+QYQQ G+    ED+++AGN  RNDE
Sbjct: 606 KRDQRTPTNDRYGAGSEQGRGQEMAGPGGRLDDETQYQQEGQKAHHEDQFAAGNSFRNDE 665

Query: 263 SESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 358
           SESEDEAPRRSR+GEGKKKRRSLE D    SD
Sbjct: 666 SESEDEAPRRSRYGEGKKKRRSLEGDDANGSD 697


>gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
           notabilis]
          Length = 710

 Score =  100 bits (250), Expect = 2e-19
 Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 11/96 (11%)
 Frame = +2

Query: 104 PKRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGN 250
           P+RDQ+    DR +            EM G AGGP D++ YQ   KA RQED+Y AGN  
Sbjct: 615 PRRDQRGLANDRNERYGAGSDQVRGQEMSGPAGGPEDDAHYQLGAKA-RQEDQYGAGNSF 673

Query: 251 RNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 358
           RNDESESEDEAPRRSRHG+GKKKRRS E D+   SD
Sbjct: 674 RNDESESEDEAPRRSRHGDGKKKRRSSEEDAATGSD 709


>gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
          Length = 695

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 52/89 (58%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
 Frame = +2

Query: 107 KRDQKAPNGDR-----------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 253
           KRD + P+ DR           K  E+ G AGGP DE++YQQ  KA R ED+Y AGN +R
Sbjct: 603 KRDPRGPSNDRNERYSAGSGQGKGQEIPGLAGGPDDEARYQQASKAYR-EDQYGAGNNSR 661

Query: 254 NDESESEDEAPRRSRHGEGKKKRRSLEAD 340
           ND+SESEDEAPRRSRHGEGKKK R  E D
Sbjct: 662 NDDSESEDEAPRRSRHGEGKKKGRGSEGD 690


>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Citrus sinensis]
          Length = 683

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 54/96 (56%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
 Frame = +2

Query: 107 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 253
           KRD +    DR D            EMGG   GP DE QYQQ G    QED+Y + N  R
Sbjct: 589 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 647

Query: 254 NDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 361
           NDESESEDEAPRRSRHGEGKKKRR  E D+ A SD+
Sbjct: 648 NDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 683


>ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
           gi|557551536|gb|ESR62165.1| hypothetical protein
           CICLE_v10014454mg [Citrus clementina]
          Length = 672

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 54/96 (56%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
 Frame = +2

Query: 107 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 253
           KRD +    DR D            EMGG   GP DE QYQQ G    QED+Y + N  R
Sbjct: 578 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 636

Query: 254 NDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 361
           NDESESEDEAPRRSRHGEGKKKRR  E D+ A SD+
Sbjct: 637 NDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 672


>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
           gi|557551535|gb|ESR62164.1| hypothetical protein
           CICLE_v10014454mg [Citrus clementina]
          Length = 701

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 54/96 (56%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
 Frame = +2

Query: 107 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 253
           KRD +    DR D            EMGG   GP DE QYQQ G    QED+Y + N  R
Sbjct: 607 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 665

Query: 254 NDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 361
           NDESESEDEAPRRSRHGEGKKKRR  E D+ A SD+
Sbjct: 666 NDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 701


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
           gi|223537608|gb|EEF39232.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 702

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
 Frame = +2

Query: 107 KRDQKAPNGDRKD--GEMG-GSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESESED 277
           KRDQ+    DR     + G  +AG P DE++YQQ G     ED++ AGN  RNDESESED
Sbjct: 615 KRDQRMTANDRYSTGSDQGRNTAGEPDDEARYQQEGLKASHEDQFGAGNSFRNDESESED 674

Query: 278 EAPRRSRHGEGKKKRRSLEADSNAPSD 358
           EAPRRSRHGEGKKKRR  E D+   SD
Sbjct: 675 EAPRRSRHGEGKKKRRGSEGDATPGSD 701


>ref|XP_002317344.2| hypothetical protein POPTR_0011s09210g [Populus trichocarpa]
           gi|550327985|gb|EEE97956.2| hypothetical protein
           POPTR_0011s09210g [Populus trichocarpa]
          Length = 381

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 50/92 (54%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
 Frame = +2

Query: 107 KRDQKAPNGDRKDGE------MGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESE 268
           KRDQ+A   DR D        + G+AG   DE++Y Q       ED++ A N NRNDESE
Sbjct: 289 KRDQRAAPSDRIDRHSIESDLVRGAAGESNDETRYPQETYKASHEDQFGAVNSNRNDESE 348

Query: 269 SEDEAPRRSRHGEGKKKRRSLEADSNAPSDDR 364
           SEDEAPRRSRHGEGKKKRR  E D+N  SD +
Sbjct: 349 SEDEAPRRSRHGEGKKKRRGSEGDANPGSDHK 380


>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Vitis vinifera]
          Length = 673

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
 Frame = +2

Query: 98  NRPKRDQKAPNGDRKDGEMGGS-------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 256
           NR KRDQ+ P  DR D   GGS         GP DE+QY Q  K+Q Q+D++  GN  RN
Sbjct: 593 NRTKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPDDETQYLQGLKSQ-QDDQFGGGNSFRN 651

Query: 257 DESESEDEAPRRSRHGEGKKKR 322
           DESESEDEAPRRSRHGEGKKKR
Sbjct: 652 DESESEDEAPRRSRHGEGKKKR 673


>emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]
          Length = 299

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
 Frame = +2

Query: 98  NRPKRDQKAPNGDRKDGEMGGS-------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 256
           NR KRDQ+ P  DR D   GGS         GP DE+QY Q  K+Q Q+D++  GN  RN
Sbjct: 219 NRTKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPDDETQYLQGLKSQ-QDDQFGGGNSFRN 277

Query: 257 DESESEDEAPRRSRHGEGKKKR 322
           DESESEDEAPRRSRHGEGKKKR
Sbjct: 278 DESESEDEAPRRSRHGEGKKKR 299


>ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Fragaria vesca subsp. vesca]
          Length = 689

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
 Frame = +2

Query: 107 KRDQKAPNGDRKDGEMGGS-------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDES 265
           KRD +    DR +    GS       AGGP DE+ YQ   K+ +++  Y AGN  RND+S
Sbjct: 602 KRDPRGSGNDRNERYSAGSGHGKEMQAGGPDDENHYQHSSKSYQED--YGAGNNGRNDDS 659

Query: 266 ESEDEAPRRSRHGEGKKKRRSLEADSNA 349
           ESEDEAPRRSRHGEGKKKRR  E D+ +
Sbjct: 660 ESEDEAPRRSRHGEGKKKRRDSEGDATS 687


>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum tuberosum]
          Length = 692

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
 Frame = +2

Query: 101 RPKRDQKAPNGDRKDG---------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 253
           + KR+Q+AP  DR D          EM GS GGP  +  + Q GK++  ++++ AGN  +
Sbjct: 597 KAKREQRAPVSDRNDRFSSDQGKGQEMMGSVGGP--DGVHMQIGKSEH-DNQFGAGNSQK 653

Query: 254 NDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDDR 364
           N+ESESEDEAPRRSRHG+GKKKRR ++ D+   S++R
Sbjct: 654 NEESESEDEAPRRSRHGDGKKKRRDVDEDAATGSENR 690


>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum lycopersicum]
          Length = 689

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 9/97 (9%)
 Frame = +2

Query: 101 RPKRDQKAPNGDRKDG---------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 253
           R KR+Q+AP  DR D          EM GS  GP  +  + Q GK++  ++++ AGN  +
Sbjct: 594 RAKREQRAPVSDRNDRFSSDQGKGQEMMGSVNGP--DGVHMQIGKSEH-DNQFGAGNSLK 650

Query: 254 NDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDDR 364
           ND SESEDEAPRRSRHG+GKKKRR ++ D+   S++R
Sbjct: 651 NDGSESEDEAPRRSRHGDGKKKRRDVDEDAATGSENR 687


>ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like, partial [Cucumis sativus]
          Length = 331

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/90 (51%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
 Frame = +2

Query: 107 KRDQKAPNGDRKDGEMGGSAG------GPGDESQYQQRGKAQRQEDRYSAGNGNRNDESE 268
           KRDQ+    DR    M  + G      G  +E QY+Q  KA   E +Y  G   RN+ESE
Sbjct: 242 KRDQRGLTNDRYIVGMDQNKGVEIQSSGRDEEMQYKQGSKAYSDE-QYGTGTTFRNEESE 300

Query: 269 SEDEAPRRSRHGEGKKKRRSLEADSNAPSD 358
           SEDEAPRRSRHGEGKKKRR  E D+ A S+
Sbjct: 301 SEDEAPRRSRHGEGKKKRRGSEGDATAISN 330


>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Cucumis sativus]
          Length = 707

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/90 (51%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
 Frame = +2

Query: 107 KRDQKAPNGDRKDGEMGGSAG------GPGDESQYQQRGKAQRQEDRYSAGNGNRNDESE 268
           KRDQ+    DR    M  + G      G  +E QY+Q  KA   E +Y  G   RN+ESE
Sbjct: 618 KRDQRGLTNDRYIVGMDQNKGVEIQSSGRDEEMQYKQGSKAYSDE-QYGTGTTFRNEESE 676

Query: 269 SEDEAPRRSRHGEGKKKRRSLEADSNAPSD 358
           SEDEAPRRSRHGEGKKKRR  E D+ A S+
Sbjct: 677 SEDEAPRRSRHGEGKKKRRGSEGDATAISN 706


>gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
          Length = 697

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
 Frame = +2

Query: 107 KRDQKAPN-GDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 259
           KRDQ+  +  DR        K  +M   +G P D+ QYQQ  KA   +D + A N  RND
Sbjct: 607 KRDQRTTDRNDRYGSGSEQGKSQDMLSQSGAPDDDMQYQQGYKAN--QDDHPAVNNFRND 664

Query: 260 ESESEDEAPRRSRHGEGKKKRRSLE 334
           +SESEDEAPRRSRHGEGKKKRR  E
Sbjct: 665 DSESEDEAPRRSRHGEGKKKRRGPE 689


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 691

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
 Frame = +2

Query: 107 KRDQK-APNGDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 259
           KRDQ+ A   DR        K  +M   +GGP D++QYQQ  K    +D + A N  RND
Sbjct: 611 KRDQRTADRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYKGN--QDDHPAVNNFRND 668

Query: 260 ESESEDEAPRRSRHGEGKKKRR 325
           +SESEDEAPRRSRHGEGKKK +
Sbjct: 669 DSESEDEAPRRSRHGEGKKKHK 690


>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum tuberosum]
          Length = 677

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
 Frame = +2

Query: 101 RPKRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNG 247
           R K+DQ+AP  +R D            E+ GS GGP +   Y Q              N 
Sbjct: 592 RVKKDQRAPFNERNDRFSSGPDQGRGQEIAGSVGGPAEGVHYPQ------------TENS 639

Query: 248 NRNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 358
            RNDESESEDEAPRRSRHG+GKKK+ S++ D+   ++
Sbjct: 640 FRNDESESEDEAPRRSRHGDGKKKKNSMDGDATTGTE 676


>ref|XP_004158090.1| PREDICTED: uncharacterized protein LOC101225604 [Cucumis sativus]
          Length = 67

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/64 (54%), Positives = 43/64 (67%)
 Frame = +2

Query: 167 GGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLEADSN 346
           G   DE    ++G     +D+Y  G   RN+ESESE+EAPRRSRHGEGKKKRR  E D++
Sbjct: 3   GSGHDEGMQYKQGSKAYPDDQYGMGTTFRNEESESENEAPRRSRHGEGKKKRRGSEGDAS 62

Query: 347 APSD 358
           A SD
Sbjct: 63  AISD 66


>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum lycopersicum]
          Length = 671

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 38/86 (44%), Positives = 51/86 (59%)
 Frame = +2

Query: 101 RPKRDQKAPNGDRKDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESESEDE 280
           R K+DQ+AP  +R D    G   G G E+     G  +      +  N  RNDESESEDE
Sbjct: 586 RVKKDQRAPFNERNDRFSSGPDQGRGQETAGSVVGPDEGVHYPQTE-NSFRNDESESEDE 644

Query: 281 APRRSRHGEGKKKRRSLEADSNAPSD 358
           APRRSRHG+GKKK+ S++ D+   ++
Sbjct: 645 APRRSRHGDGKKKKNSMDGDATTGTE 670