BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023195
         (1431 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   179   e-107
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   157   e-104
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   159   e-103
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...   162   e-102
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   154   e-102
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   161   e-101
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   161   e-101
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...   166   e-100
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   159   3e-99
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...   165   3e-99
gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus pe...   177   5e-99
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...   178   1e-98
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   161   2e-94
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304...   147   2e-94
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   153   4e-94
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             150   5e-94
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...   163   2e-93
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   160   7e-93
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   160   7e-93
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   145   7e-89

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  179 bits (453), Expect(4) = e-107
 Identities = 85/167 (50%), Positives = 106/167 (63%)
 Frame = +2

Query: 929  VSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTY 1108
            V +Q  YL +PTIIGRS                  WK KLLS  GK +LIKSVAQAIPTY
Sbjct: 747  VDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTY 806

Query: 1109 IISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFND 1288
            ++S F LP+ +  +I+ L++ FWW      RK+HW +W+ LC  K  GGLGFRDL CFN 
Sbjct: 807  MMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQ 866

Query: 1289 AMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            ++L KQ WRL  G  +LL   L+A+YF  +  LEA+ GYNPSFTWRS
Sbjct: 867  SLLAKQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRS 913



 Score =  137 bits (344), Expect(4) = e-107
 Identities = 67/131 (51%), Positives = 88/131 (67%)
 Frame = +3

Query: 234 EHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNALLAFEIFH 413
           + + +FRPISLC V+YK++SKT+ANRLK+ILP +I   QSAFV   LITDNAL+AFEIFH
Sbjct: 502 QSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFH 561

Query: 414 KMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCVSMVSFSIL 593
            MK   A K     L+    + YDRVEW FL  VM ++  C  ++D +M C+S VSF+  
Sbjct: 562 AMKRKDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFN 621

Query: 594 INGQPGNTFSP 626
           +NG    + SP
Sbjct: 622 VNGVVEGSLSP 632



 Score = 93.6 bits (231), Expect(4) = e-107
 Identities = 48/99 (48%), Positives = 64/99 (64%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LFL CA+AFS +L K       HG QIC  AP +SHLFFADDSI+F +A+ +E  + + I
Sbjct: 646 LFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADI 705

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREEIGAELAERLGV 921
           I +YE A GQ +NL K+++ FSR V  E  + +   LGV
Sbjct: 706 ISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGV 744



 Score = 52.4 bits (124), Expect(4) = e-107
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +2

Query: 29  DEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKYFNHTFLA 208
           DEV  AL  MHP KA   DG  A+F++KFW I+  DVIS +     G       N T + 
Sbjct: 434 DEVKEALFAMHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIV 493

Query: 209 LIPK 220
           LIPK
Sbjct: 494 LIPK 497


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  157 bits (396), Expect(4) = e-104
 Identities = 77/171 (45%), Positives = 103/171 (60%)
 Frame = +2

Query: 917  AF*LVSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQA 1096
            AF  V     YL +PT IG S                  WKGK LS AG+ +LIK+VAQA
Sbjct: 749  AFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQA 808

Query: 1097 IPTYIISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLE 1276
            IPTY + CF +P  I   I  +  +F+W Q++++R++ W AW KL   K  GGLG R+ +
Sbjct: 809  IPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFD 868

Query: 1277 CFNDAMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             FN A+L KQ WR++   DSL+A  +K KYFPR+NFLEA++  N SFT +S
Sbjct: 869  VFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKS 919



 Score =  141 bits (356), Expect(4) = e-104
 Identities = 66/139 (47%), Positives = 92/139 (66%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K+K  E   +FRPISLCNV+YK+++K +ANR+K++LP +IH +QS FV G LITDN 
Sbjct: 500 LIPKKKHCESPVDFRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNV 559

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           L+A+E FH ++     KK +  L+    + YDRVEW FL  +ML+L     +  L+M CV
Sbjct: 560 LVAYECFHFLRKKKTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCV 619

Query: 570 SMVSFSILINGQPGNTFSP 626
           +   FS+L+NGQP   F P
Sbjct: 620 TSARFSVLVNGQPSRNFFP 638



 Score = 79.7 bits (195), Expect(4) = e-104
 Identities = 40/88 (45%), Positives = 57/88 (64%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+ CAE  S +LR  E     HG++I +R   ISHLFFADDS++F RA   E++    I
Sbjct: 652 LFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDI 711

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREE 888
           +  YE A GQ +N+EKS++S+SR +  +
Sbjct: 712 LSTYEAASGQKLNMEKSEMSYSRNLEPD 739



 Score = 70.9 bits (172), Expect(4) = e-104
 Identities = 35/73 (47%), Positives = 45/73 (61%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L  PF ++EV AAL QMHP KA  PDG  A+FY+ FW  +  DV + +L++LN       
Sbjct: 433 LDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGA 492

Query: 188 FNHTFLALIPKKK 226
            N T + LIPKKK
Sbjct: 493 VNQTHIVLIPKKK 505


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  159 bits (403), Expect(4) = e-103
 Identities = 77/167 (46%), Positives = 105/167 (62%)
 Frame = +2

Query: 929  VSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTY 1108
            V + + YL IP+I GRS                  WK KLLS AGK IL+KSV QAIPTY
Sbjct: 748  VERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTY 807

Query: 1109 IISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFND 1288
            ++  ++LP  I Q+I+  ++ FWW     +R+IHW  W+ LC  K  GG+GFRDL  FND
Sbjct: 808  LMGVYKLPCSIIQKIHSAMARFWWGSSDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFND 867

Query: 1289 AMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            A+L +Q WRL+    SLLA  +KAKY+  ++FL+A +G + S++WRS
Sbjct: 868  ALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRS 914



 Score =  129 bits (325), Expect(4) = e-103
 Identities = 64/127 (50%), Positives = 85/127 (66%)
 Frame = +3

Query: 246 EFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNALLAFEIFHKMKH 425
           EFRPI+LCNV+YKL+SK +  RLK  LP L+   QSAFV G LITDNAL+A E+FH MKH
Sbjct: 507 EFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFHSMKH 566

Query: 426 NHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCVSMVSFSILINGQ 605
            +  +K    ++    + YDRVEW FL  ++L +     +V+LIM CVS VS+S +ING 
Sbjct: 567 RNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGG 626

Query: 606 PGNTFSP 626
              + +P
Sbjct: 627 VCGSVTP 633



 Score = 84.3 bits (207), Expect(4) = e-103
 Identities = 39/73 (53%), Positives = 51/73 (69%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L +PF+K+E+  AL+QMHP KA  PDG  AIFY+KFW I+  DV   +  IL+G+ +P  
Sbjct: 428 LLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSC 487

Query: 188 FNHTFLALIPKKK 226
            NHT +ALIPK K
Sbjct: 488 INHTNIALIPKVK 500



 Score = 73.2 bits (178), Expect(4) = e-103
 Identities = 38/85 (44%), Positives = 54/85 (63%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+  A+AFS +++K       HG +     P ISHLFFAD S++F RA+ +E  +   I
Sbjct: 647 LFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEI 706

Query: 805 IKEYE*AYGQWINLEKSKISFSRGV 879
           +  YE A GQ IN +KS++SFS+GV
Sbjct: 707 LNLYEQASGQKINYDKSEVSFSKGV 731


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  162 bits (411), Expect(4) = e-102
 Identities = 74/167 (44%), Positives = 102/167 (61%)
 Frame = +2

Query: 929  VSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTY 1108
            V     YL +P ++GR+                  W+ + LS AGK +L+K VAQ+IP Y
Sbjct: 1162 VDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWREQTLSIAGKEVLLKVVAQSIPLY 1221

Query: 1109 IISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFND 1288
            ++SCF LP  +C +I  +++ FWW Q+ + RKIHW  W +LC +K  GG+GFR L+ FN 
Sbjct: 1222 VMSCFLLPQGLCHEIEQMMARFWWGQQGENRKIHWMRWERLCKAKTEGGMGFRCLQAFNM 1281

Query: 1289 AMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            AML KQ WRL++   SL +  LKAKYFP+ NF EA +G  PS  W+S
Sbjct: 1282 AMLAKQGWRLVHNPHSLASRLLKAKYFPQTNFWEATLGSRPSCVWKS 1328



 Score =  122 bits (307), Expect(4) = e-102
 Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 13/157 (8%)
 Frame = +3

Query: 210  LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
            L  K K+   + + RPISLCNV+Y++ +KT+ANR+K ++ ++I  +QSAFV G LITDN+
Sbjct: 909  LIPKVKEPRTMAQLRPISLCNVLYRIGAKTLANRMKFVMQSVISESQSAFVPGRLITDNS 968

Query: 390  LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
            ++AFEI H +K     +K    L+    + YDRVEW FL  +ML +     +V ++M CV
Sbjct: 969  IVAFEIAHFLKQRRRGRKGSLALKLDMSKAYDRVEWEFLEKMMLAMGFPILWVRMVMDCV 1028

Query: 570  SMVSFSILINGQP------------GNTFSP-IFILC 641
            + VS+S L+NG+P            G+  SP +F+LC
Sbjct: 1029 TTVSYSFLVNGEPTRILYPTRGLRQGDPLSPYLFLLC 1065



 Score = 92.0 bits (227), Expect(4) = e-102
 Identities = 47/99 (47%), Positives = 59/99 (59%)
 Frame = +1

Query: 625  LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
            LFL CAE F+ +L K E  G   GI IC  AP +SHLFFADDS +F +A      V  HI
Sbjct: 1061 LFLLCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVFAKATDNNCGVLKHI 1120

Query: 805  IKEYE*AYGQWINLEKSKISFSRGVREEIGAELAERLGV 921
             + YE A GQ IN +KS ++FS  +  +  + LA  LGV
Sbjct: 1121 FEVYEHASGQQINCQKSCVAFSANIHMDTQSRLASVLGV 1159



 Score = 67.8 bits (164), Expect(4) = e-102
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = +2

Query: 2    ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
            + L   F+  E+  A+ QM P KA  PDG P +FY+K+W IV  DV++ +   L  N   
Sbjct: 840  QVLIADFSYQEIKDAVFQMQPSKAPGPDGLPPLFYQKYWRIVGDDVVAAVRAFLQSNEML 899

Query: 182  KYFNHTFLALIPKKKK 229
            +  NHTF+ LIPK K+
Sbjct: 900  RQLNHTFVTLIPKVKE 915


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  154 bits (390), Expect(4) = e-102
 Identities = 75/167 (44%), Positives = 100/167 (59%)
 Frame = +2

Query: 929  VSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTY 1108
            V +   YL IP+I GRS                  WK KLLS AGK +L+KSV QAIPTY
Sbjct: 748  VDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTY 807

Query: 1109 IISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFND 1288
            ++  ++ P  I Q+I   ++ FWW     +RKIHW  W+ +CN K  GG+GF+DL  FND
Sbjct: 808  LMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFND 867

Query: 1289 AMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            A+L +Q WRL     SLL   +KAKYFP  +FL A +G++ S++W S
Sbjct: 868  ALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYSWSS 914



 Score =  122 bits (307), Expect(4) = e-102
 Identities = 64/131 (48%), Positives = 84/131 (64%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K K      EFRPI+LCNV+YKL+SK I  RLK  LP +I   QSAFV G LITDNA
Sbjct: 495 LIPKVKNPTKAAEFRPIALCNVLYKLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNA 554

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           L+A E+FH MK+ +  +K    ++    + YDRVEW FL  ++L +     +V+LIM  V
Sbjct: 555 LIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFV 614

Query: 570 SMVSFSILING 602
           S V++S +ING
Sbjct: 615 SSVTYSFIING 625



 Score = 85.1 bits (209), Expect(4) = e-102
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L  PF+KDE++AAL QMHP KA  PDG   IFY++FW IV  DV S I +IL+G+++P  
Sbjct: 428 LLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHIVGDDVTSFISNILHGHSSPSC 487

Query: 188 FNHTFLALIPKKK 226
            N+T +ALIPK K
Sbjct: 488 VNNTNIALIPKVK 500



 Score = 82.0 bits (201), Expect(4) = e-102
 Identities = 43/99 (43%), Positives = 60/99 (60%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+  A+AFS ++++       HG +     P ISHLFFADDS++F RAN +E  +   I
Sbjct: 647 LFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDI 706

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREEIGAELAERLGV 921
           + +YE A GQ IN EKS++S+SRGV      EL   L +
Sbjct: 707 LNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNM 745


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  161 bits (408), Expect(4) = e-101
 Identities = 77/161 (47%), Positives = 99/161 (61%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +P  +GRS                  WK KLLS AGK ILIK+VAQAIPT+ + CF+
Sbjct: 979  YLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFE 1038

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            L  D+C QI+ +I+ +WW  ++   K+HW +WNKL   K+ GGLGFRD+  FN AML KQ
Sbjct: 1039 LTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQ 1098

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WRL+   DSL +  L+AKYFP  +    K   N S+TWRS
Sbjct: 1099 GWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1139



 Score =  129 bits (324), Expect(4) = e-101
 Identities = 67/139 (48%), Positives = 92/139 (66%)
 Frame = +3

Query: 210  LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
            L  K KK E + + RPISLCNV YKL+SK +ANRLK ILP +I   QSAFV G LI+DN 
Sbjct: 720  LIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNI 779

Query: 390  LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
            L+A E+ H M++  + +  +   +    + YDRVEW FL  +ML+L     +V+LIM+CV
Sbjct: 780  LIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCV 839

Query: 570  SMVSFSILINGQPGNTFSP 626
            S V++ I +NG+   +FSP
Sbjct: 840  STVTYRIRVNGELSESFSP 858



 Score = 87.0 bits (214), Expect(4) = e-101
 Identities = 49/95 (51%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +1

Query: 625  LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
            LFL CAE FS +L KTE  G  HGI+IC  AP +SHL FADDS+I  RAN  E Q    I
Sbjct: 872  LFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTI 931

Query: 805  IKEYE*AYGQWINLEKSKISFSRGVRE-EIGAELA 906
            ++ YE   GQ IN +KS + FS      E GA +A
Sbjct: 932  LQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMA 966



 Score = 63.9 bits (154), Expect(4) = e-101
 Identities = 32/76 (42%), Positives = 46/76 (60%)
 Frame = +2

Query: 2   ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
           E+L+  FT++EV  AL  +  +KA  PDG PA FY+  W +V   V   +L++L G A P
Sbjct: 651 ESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIP 710

Query: 182 KYFNHTFLALIPKKKK 229
           + +N   + LIPK KK
Sbjct: 711 EGWNDITIVLIPKVKK 726


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  161 bits (408), Expect(4) = e-101
 Identities = 77/161 (47%), Positives = 99/161 (61%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +P  +GRS                  WK KLLS AGK ILIK+VAQAIPT+ + CF+
Sbjct: 1006 YLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFE 1065

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            L  D+C QI+ +I+ +WW  ++   K+HW +WNKL   K+ GGLGFRD+  FN AML KQ
Sbjct: 1066 LTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQ 1125

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WRL+   DSL +  L+AKYFP  +    K   N S+TWRS
Sbjct: 1126 GWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1166



 Score =  127 bits (320), Expect(4) = e-101
 Identities = 66/139 (47%), Positives = 92/139 (66%)
 Frame = +3

Query: 210  LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
            L  K KK E + + RPISLCNV YKL+SK +ANRLK ILP +I   QSAFV G LI+DN 
Sbjct: 747  LIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNI 806

Query: 390  LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
            L+A E+ H M++  + +  +   +    + YDRVEW FL  ++L+L     +V+LIM+CV
Sbjct: 807  LIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCV 866

Query: 570  SMVSFSILINGQPGNTFSP 626
            S V++ I +NG+   +FSP
Sbjct: 867  STVTYRIRVNGELSESFSP 885



 Score = 86.7 bits (213), Expect(4) = e-101
 Identities = 45/82 (54%), Positives = 53/82 (64%)
 Frame = +1

Query: 625  LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
            LFL CAE FS +L KTE  G  HGI+IC  AP +SHL FADDS+I  RAN  E Q    I
Sbjct: 899  LFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTI 958

Query: 805  IKEYE*AYGQWINLEKSKISFS 870
            ++ YE   GQ IN +KS + FS
Sbjct: 959  LQIYEECSGQVINKDKSAVMFS 980



 Score = 63.9 bits (154), Expect(4) = e-101
 Identities = 32/76 (42%), Positives = 46/76 (60%)
 Frame = +2

Query: 2   ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
           E+L+  FT++EV  AL  +  +KA  PDG PA FY+  W +V   V   +L++L G A P
Sbjct: 678 ESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIP 737

Query: 182 KYFNHTFLALIPKKKK 229
           + +N   + LIPK KK
Sbjct: 738 EGWNDITIVLIPKVKK 753


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score =  166 bits (419), Expect(4) = e-100
 Identities = 79/168 (47%), Positives = 107/168 (63%)
 Frame = +2

Query: 926  LVSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPT 1105
            +VSK   YL +P++IGR                  NW+ K+ S+ GK ILIK+VAQA+P 
Sbjct: 720  VVSKYEKYLGLPSMIGRKKTSFFREVKLRVLSKINNWQHKMFSSGGKEILIKAVAQAVPA 779

Query: 1106 YIISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFN 1285
            Y +S F+LP  +C++I   I+ FWW  ++DKR IHW  W+KL  +K  GGLGFRD   FN
Sbjct: 780  YAMSVFKLPKGLCEEIQSEIAKFWWGSKKDKRGIHWARWDKLSCAKSRGGLGFRDFISFN 839

Query: 1286 DAMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             AM+ KQ WRL+   +SL++  L+A+YF   +FL+AK G NPSF WRS
Sbjct: 840  QAMVAKQGWRLIQFPNSLVSKVLRARYFKSCSFLDAKPGSNPSFIWRS 887



 Score =  139 bits (349), Expect(4) = e-100
 Identities = 68/139 (48%), Positives = 92/139 (66%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K  K + V EFRPISLCNVIY++++KTIANRLK IL  +I  TQSAF+   LI+DN 
Sbjct: 469 LIPKTTKPKKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSAFIPNRLISDNV 528

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           ++ +E  HK++H+  KKK    L+    + YDRVEW FL   M +L     +++LIM C+
Sbjct: 529 IIGYECLHKIRHSQGKKKGLVALKLDISKAYDRVEWTFLKQTMKKLGFSRKWLELIMGCI 588

Query: 570 SMVSFSILINGQPGNTFSP 626
           + VSFS++ING P   F P
Sbjct: 589 TSVSFSVIINGTPKGFFHP 607



 Score = 77.0 bits (188), Expect(4) = e-100
 Identities = 37/74 (50%), Positives = 46/74 (62%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L+ PFT++E+V AL QM P KA  PDG PA F++K W  V+  VI   + ILN       
Sbjct: 402 LEEPFTEEEIVEALHQMSPTKAPGPDGLPAAFFQKHWQTVRSSVIGTCMHILNEGGNLSA 461

Query: 188 FNHTFLALIPKKKK 229
            NHTF+ALIPK  K
Sbjct: 462 LNHTFIALIPKTTK 475



 Score = 55.8 bits (133), Expect(4) = e-100
 Identities = 33/88 (37%), Positives = 44/88 (50%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+ C E FS +L + E      G++       ISHL FADDS++F  A+  E +    I
Sbjct: 621 LFIICTEVFSSLLLQAETKKRISGLRFAEDVT-ISHLLFADDSLVFSTASVAECKHLKGI 679

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREE 888
              Y  A GQ  N EKS + F   + EE
Sbjct: 680 FDRYAKASGQIFNFEKSSMFFGGKIPEE 707


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  159 bits (403), Expect(4) = 3e-99
 Identities = 72/167 (43%), Positives = 106/167 (63%)
 Frame = +2

Query: 929  VSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTY 1108
            V +   YL IP + GRS                  WK KLLS AGK +LIK+V QA+PTY
Sbjct: 751  VDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTY 810

Query: 1109 IISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFND 1288
            ++  ++LP  + Q+I+  ++ FWW  + D+RK+HW +W K+C  K  GG+GF+DL  FND
Sbjct: 811  LMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGFKDLAVFND 870

Query: 1289 AMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            A+L KQ WRL++  +SLL+  + AKY+P  +   A++GY+ S++WRS
Sbjct: 871  ALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLGYSHSYSWRS 917



 Score =  122 bits (307), Expect(4) = 3e-99
 Identities = 64/139 (46%), Positives = 87/139 (62%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K K    V EFRPISLCNV+YK+ SK I  RLK  LP +    QSAFV G LI+DN+
Sbjct: 498 LIPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKRFLPCIATENQSAFVPGRLISDNS 557

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           L+A EIFH MK  +  +K    ++    + YDRVEW FL  ++L +     +V+L+M CV
Sbjct: 558 LIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCV 617

Query: 570 SMVSFSILINGQPGNTFSP 626
           + VS+S +ING+   + +P
Sbjct: 618 ATVSYSFIINGRVCGSVTP 636



 Score = 78.2 bits (191), Expect(4) = 3e-99
 Identities = 42/93 (45%), Positives = 57/93 (61%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+  A+AFS ++++  +    HG +     P ISHL FADDS++F RA  +E      I
Sbjct: 650 LFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDI 709

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREEIGAEL 903
           + +YE A GQ IN EKS++SFSRGV  E   EL
Sbjct: 710 LNKYEAASGQKINYEKSEVSFSRGVSCEKKEEL 742



 Score = 73.2 bits (178), Expect(4) = 3e-99
 Identities = 34/75 (45%), Positives = 50/75 (66%)
 Frame = +2

Query: 2   ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
           + L +P++K+E+ AAL+ MHP KA  PDG  AIFY++FW I+  +V + +  IL+  + P
Sbjct: 429 DILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSCP 488

Query: 182 KYFNHTFLALIPKKK 226
              N T +ALIPK K
Sbjct: 489 GNVNCTNIALIPKVK 503


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score =  165 bits (417), Expect(4) = 3e-99
 Identities = 72/168 (42%), Positives = 106/168 (63%)
 Frame = +2

Query: 926  LVSKQVVYLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPT 1105
            +VS+   YL +P+++GR                  NW+    S+ GK ILIK+VAQA+P 
Sbjct: 357  VVSRHEKYLGLPSMVGRKKTSFFNEIKLRIINKISNWQANFFSSGGKEILIKAVAQAVPA 416

Query: 1106 YIISCFQLPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFN 1285
            Y +S F+LP  +C+ +   I+ FWW ++++KR IHW  W +LC +K  GGLGFRDL  FN
Sbjct: 417  YAMSVFKLPLGLCEDMQKAIAGFWWGKKREKRSIHWSKWERLCQAKKRGGLGFRDLSSFN 476

Query: 1286 DAMLVKQCWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             A++ KQ WR++   +SL+A  +K KYF  + F+EA++G NPS+ WRS
Sbjct: 477  QALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRS 524



 Score =  136 bits (342), Expect(4) = 3e-99
 Identities = 74/147 (50%), Positives = 97/147 (65%), Gaps = 13/147 (8%)
 Frame = +3

Query: 240 VHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNALLAFEIFHKM 419
           V E+RPISLCNVIY++I+KTIANRLKLIL ++I  TQSAFV   LITDN ++ +E  HK+
Sbjct: 116 VMEYRPISLCNVIYRIIAKTIANRLKLILDSVISPTQSAFVPNRLITDNIIVGYECLHKI 175

Query: 420 KHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCVSMVSFSILIN 599
           +H+  KK     L+    + YDRVEW FL   ++RL     +V+L+MRC+S  SFS+LIN
Sbjct: 176 RHSKNKKHGLVALKLDNSKAYDRVEWEFLRCTLVRLGFSHKWVELVMRCISTTSFSVLIN 235

Query: 600 G------QP------GNTFSP-IFILC 641
           G      QP      G   SP +FI+C
Sbjct: 236 GVAKGLIQPQRGLRQGCPLSPYLFIIC 262



 Score = 74.7 bits (182), Expect(4) = 3e-99
 Identities = 35/71 (49%), Positives = 46/71 (64%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L + FT+ E++ AL+QMHP KA  PDG PA+F++K W+ V   VI+  L ILN       
Sbjct: 39  LDQAFTEAEILEALSQMHPTKAPGPDGLPAVFFQKHWASVSEGVIATCLHILNDGGNIAP 98

Query: 188 FNHTFLALIPK 220
            NHTF+ LIPK
Sbjct: 99  LNHTFICLIPK 109



 Score = 57.8 bits (138), Expect(4) = 3e-99
 Identities = 31/87 (35%), Positives = 45/87 (51%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+ CAE F+ +L + E     HG++       I+HL FADDS++F RA   +      +
Sbjct: 258 LFIICAEVFTNLLHQAESNQLIHGLKFSGNLS-ITHLLFADDSLVFTRATKEDCTNLKQL 316

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVRE 885
              Y  A GQ  N EKS + FS   ++
Sbjct: 317 FDCYAAASGQIFNFEKSSMFFSENAKQ 343


>gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
          Length = 1072

 Score =  177 bits (448), Expect(4) = 5e-99
 Identities = 82/161 (50%), Positives = 105/161 (65%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +PTI G+                   WK KLLS AGK ILIK+V QAIPTY +SCFQ
Sbjct: 703  YLGLPTIAGKGRKQLFQHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFQ 762

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            +P  +C+++N +++ FWW + +DKR IHW  W  LC SK  GGLGFRDLE FN A+L KQ
Sbjct: 763  IPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQ 822

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            CWR++   +SL+A   +A+Y P   FLEA++G NPSF W S
Sbjct: 823  CWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWGS 863



 Score =  115 bits (289), Expect(4) = 5e-99
 Identities = 62/139 (44%), Positives = 83/139 (59%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K K    V EFRPISLC  +YK+I+KTIANRLK +LP +I  TQSAFV   +I DN 
Sbjct: 444 LIPKVKMPTTVSEFRPISLCTTVYKMIAKTIANRLKTVLPHVITETQSAFVPNRMILDNV 503

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           + AFEI + +K    ++     L+    + YDRVEW FL  +ML+L    ++V  +M C+
Sbjct: 504 MAAFEIMNTIKGVKKRRDVQMALKLDMAKAYDRVEWVFLRAMMLKLGFSATWVSKVMDCI 563

Query: 570 SMVSFSILINGQPGNTFSP 626
           S  +FS+L  G P     P
Sbjct: 564 STTTFSVLWKGTPVGHIMP 582



 Score = 70.9 bits (172), Expect(4) = 5e-99
 Identities = 35/75 (46%), Positives = 47/75 (62%)
 Frame = +2

Query: 2   ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
           + L + FT++E+   L QM P KA   DG PA+F++K+W IV   V    L ILNG  + 
Sbjct: 375 DRLLQAFTREELEHTLFQMFPTKAPGHDGMPALFFQKYWHIVGDKVAKKCLQILNGEGSV 434

Query: 182 KYFNHTFLALIPKKK 226
           + FNHT +ALIPK K
Sbjct: 435 REFNHTLIALIPKVK 449



 Score = 69.3 bits (168), Expect(4) = 5e-99
 Identities = 34/82 (41%), Positives = 47/82 (57%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LFL C E FS +L   E  G+  G+Q+   AP ++HL FADDSI+F +A ++       +
Sbjct: 596 LFLICTEGFSCLLHGAERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKACMALETL 655

Query: 805 IKEYE*AYGQWINLEKSKISFS 870
            + YE   GQ IN  KS +S S
Sbjct: 656 FQTYEEVTGQQINYSKSALSLS 677


>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score =  178 bits (451), Expect(4) = 1e-98
 Identities = 82/161 (50%), Positives = 106/161 (65%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +PTI G+                   WK KLLS AGK ILIK+V QAIPTY +SCF+
Sbjct: 453  YLGLPTIAGKGRKQLFQHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFR 512

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            +P  +C+++N +++ FWW + +DKR IHW  W  LC SK  GGLGFRDLE FN A+L KQ
Sbjct: 513  IPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQ 572

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            CWR++   +SL+A   +A+Y P   FLEA++G NPSF WRS
Sbjct: 573  CWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRS 613



 Score =  110 bits (276), Expect(4) = 1e-98
 Identities = 61/139 (43%), Positives = 81/139 (58%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K K    V EFRPISLC  +YK+I+KTIANRLK +L  +I  TQSAFV   +I DN 
Sbjct: 194 LIPKVKMPTIVSEFRPISLCTTVYKMIAKTIANRLKTVLSHVITETQSAFVPNRMILDNV 253

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           + AFEI + +K     +     L+    + YDRVEW FL  +ML+L    ++V  +M C+
Sbjct: 254 MAAFEIMNTIKGVKKGRDVQMALKLDMAKAYDRVEWVFLRAMMLKLGFSATWVSKVMDCI 313

Query: 570 SMVSFSILINGQPGNTFSP 626
           S  +FS+L  G P     P
Sbjct: 314 STTTFSVLWKGTPVGHIMP 332



 Score = 72.4 bits (176), Expect(4) = 1e-98
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LFL C E FS +LR  E  G+  G+Q+   AP ++HL FADDSI+F +A +++      +
Sbjct: 346 LFLICTEGFSCLLRGAERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKDCMALETL 405

Query: 805 IKEYE*AYGQWINLEKSKISFS 870
            + YE   GQ IN  KS +S S
Sbjct: 406 FQTYEEVTGQQINYSKSALSLS 427



 Score = 70.5 bits (171), Expect(4) = 1e-98
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L + FT++E+   L QM P KA   DG PA+F++K+W IV   V    L ILNG  + + 
Sbjct: 127 LLQAFTREELEHTLFQMFPTKAPGHDGMPALFFQKYWHIVGDKVAKKCLQILNGEGSVRE 186

Query: 188 FNHTFLALIPKKK 226
           FNHT +ALIPK K
Sbjct: 187 FNHTLIALIPKVK 199


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  161 bits (407), Expect(4) = 2e-94
 Identities = 81/161 (50%), Positives = 102/161 (63%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +PT+ G+                   W+GKLLS AGK +LIK+VAQAIP Y +S FQ
Sbjct: 1038 YLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQ 1097

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            LP      IN  ++ FWW +   K  IHW  W+ LC SK +GGLGFRDL  FN A+L KQ
Sbjct: 1098 LPAGTSDAINKCVARFWWGKEGGKG-IHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQ 1156

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WRLM   DSL+A  LKAKYFP ++F+EA++G +PS+ WRS
Sbjct: 1157 GWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRS 1197



 Score =  116 bits (290), Expect(4) = 2e-94
 Identities = 61/139 (43%), Positives = 83/139 (59%)
 Frame = +3

Query: 210  LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
            L  K +  + V E+RPISLCNV+YKL+SK +ANRLK +LP +I   QSAF+   +I DN 
Sbjct: 779  LIPKVQNPKKVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQRIIHDNI 838

Query: 390  LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
            + AFEI H +K      ++   L+    + YDRVEW FL  +M  +     FV LIM CV
Sbjct: 839  IAAFEIIHCLKRRGKDSRQKIALKLDMTKAYDRVEWGFLQRMMEVMGFPDRFVFLIMDCV 898

Query: 570  SMVSFSILINGQPGNTFSP 626
              V++S+L+ G P     P
Sbjct: 899  KSVTYSVLLQGAPFGKIKP 917



 Score = 70.5 bits (171), Expect(4) = 2e-94
 Identities = 37/82 (45%), Positives = 47/82 (57%)
 Frame = +1

Query: 625  LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
            LFL  AE  S ++RK E     HG+ I   AP +SHLF+ADDS++F  A   +     +I
Sbjct: 931  LFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNI 990

Query: 805  IKEYE*AYGQWINLEKSKISFS 870
               YE A GQ IN +KS I FS
Sbjct: 991  FSTYEAASGQKINKDKSAICFS 1012



 Score = 69.3 bits (168), Expect(4) = 2e-94
 Identities = 30/73 (41%), Positives = 50/73 (68%)
 Frame = +2

Query: 2   ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
           ++L + + ++E+  AL  M+P K+   DG PA F++KFW+I+ +DV+ + L  LNG+ + 
Sbjct: 710 KSLDQVYRREEIELALKDMNPSKSPGSDGMPARFFQKFWNIIGNDVVDVCLRFLNGDGSI 769

Query: 182 KYFNHTFLALIPK 220
             FNH+ +ALIPK
Sbjct: 770 ADFNHSLIALIPK 782


>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
            subsp. vesca]
          Length = 1687

 Score =  147 bits (371), Expect(4) = 2e-94
 Identities = 69/161 (42%), Positives = 95/161 (59%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +PT+ GR+                  W+ +LLS AGK ILIK+VAQAIP+Y +S F+
Sbjct: 754  YLGLPTVAGRNKKEMFKRIHERLDQHLQGWQSRLLSKAGKTILIKAVAQAIPSYTMSVFK 813

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            L   +C+     ++++WW     K  IHWC W+ LC +K +GGLGFRD+ECFN A+L K 
Sbjct: 814  LSKGVCRIYQSKVANYWWGSGGKKNGIHWCKWDLLCRNKMDGGLGFRDIECFNQALLAKT 873

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WR++    SL    L+AKY    ++  A +G  PSF WRS
Sbjct: 874  VWRIVMQPTSLANRVLQAKYVHGGDWAAAPIGPKPSFIWRS 914



 Score =  123 bits (309), Expect(4) = 2e-94
 Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 13/157 (8%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K +  + V +FRPISLCNV+YKLISK + NR+K++LP +I   QSAFV G  I DN 
Sbjct: 495 LIPKIENPQGVADFRPISLCNVLYKLISKAMVNRMKVLLPEVISCYQSAFVPGRCIHDNV 554

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           + AFE+ H +++       +  L+    + YDRVEW FL  +ML+L     +V+L+M+CV
Sbjct: 555 VTAFEVIHSIRNKQTGTHPYCVLKLDISKAYDRVEWIFLRNIMLKLGFSERWVELVMKCV 614

Query: 570 SMVSFSILING------------QPGNTFSP-IFILC 641
             VSFSIL NG            + G+  SP +F+LC
Sbjct: 615 ESVSFSILWNGKAMGMINLSRGLRQGDPLSPYLFLLC 651



 Score = 81.6 bits (200), Expect(4) = 2e-94
 Identities = 41/101 (40%), Positives = 62/101 (61%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LFL C+E  + + +  E  G  HG ++   +P ISH+ FADDS++FGRA  +E+ +    
Sbjct: 647 LFLLCSEGLTSLFQNVEREGLVHGAKVSEGSPPISHILFADDSMLFGRAEMQELTLLKQC 706

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREEIGAELAERLGVLV 927
           +  YE A GQ +N +KS ++F  G+ EE  + +A  LGVLV
Sbjct: 707 LLLYERAAGQKVNFQKSAVAFGPGLLEEQKSLIATFLGVLV 747



 Score = 64.7 bits (156), Expect(4) = 2e-94
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L +PFTK ++  AL QM P K+   DG  A FY+ +W IV  +V +  L +LN  A+ K 
Sbjct: 428 LNKPFTKLDIDEALKQMGPDKSPGEDGFSARFYQAYWEIVGDEVSNRCLQVLNEGASVKD 487

Query: 188 FNHTFLALIPK 220
            NHT LALIPK
Sbjct: 488 LNHTLLALIPK 498


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  153 bits (386), Expect(4) = 4e-94
 Identities = 68/161 (42%), Positives = 96/161 (59%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +P  +G S                  W  K LS  GK ++IKSVA  +P Y++SCF+
Sbjct: 534  YLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFR 593

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            LP  I  ++   ++ FWW    D R +HW AW+KLC+SK +GGLGFR+++ FN A+L KQ
Sbjct: 594  LPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQ 653

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WRL+   DSL A   K +YF ++N L++   Y+PS+ WRS
Sbjct: 654  LWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRS 694



 Score =  130 bits (327), Expect(4) = 4e-94
 Identities = 67/157 (42%), Positives = 97/157 (61%), Gaps = 13/157 (8%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K ++   + E RPISLCNV YK+ISK +  RLK +LP LI  TQSAFV G LI+DN 
Sbjct: 275 LIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNI 334

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           L+A E+FH ++ N + K +F  ++T   + YD+VEW F+  ++ ++  C  ++  IM C+
Sbjct: 335 LIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCI 394

Query: 570 SMVSFSILINGQP------------GNTFSP-IFILC 641
           + V + +LINGQP            G+  SP +FILC
Sbjct: 395 TTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILC 431



 Score = 74.7 bits (182), Expect(4) = 4e-94
 Identities = 38/99 (38%), Positives = 54/99 (54%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+ C E     +RK E      GI++   +P +SHL FADDS+ F +AN  +  +   I
Sbjct: 427 LFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEI 486

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREEIGAELAERLGV 921
           +K+YE   GQ IN  KS I F   V + I A++   LG+
Sbjct: 487 LKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGI 525



 Score = 58.2 bits (139), Expect(4) = 4e-94
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = +2

Query: 23  TKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKYFNHTF 202
           T+ EV AAL  +HP KA  PDG  A+F++K W+I++ D++S++   L      K  N T 
Sbjct: 213 TECEVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTN 272

Query: 203 LALIPKKKK 229
           + LIPK ++
Sbjct: 273 ICLIPKTER 281


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  150 bits (379), Expect(4) = 5e-94
 Identities = 68/161 (42%), Positives = 93/161 (57%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +P  +G S                  W  K LS  GK ++IKSV   +PTY++SCF+
Sbjct: 600  YLGLPESLGGSKTRIFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFR 659

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            LP  I  ++   ++ FWW    + R +HW AWNKLC+SK +GGLGFR +  FN A+L KQ
Sbjct: 660  LPKTITSKLTSAVAKFWWSSDGESRGMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQ 719

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WRL+   DSL A   K +YF ++N L+    Y+PS+ WRS
Sbjct: 720  LWRLITVPDSLFAKVFKGRYFRKSNPLDKLKSYSPSYGWRS 760



 Score =  129 bits (323), Expect(4) = 5e-94
 Identities = 67/157 (42%), Positives = 97/157 (61%), Gaps = 13/157 (8%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K ++   + E RPISLCNV YK+ISK +  RLK ILP+LI  T SAFV G LI+DN 
Sbjct: 341 LIPKTERPTRMTELRPISLCNVGYKIISKILCQRLKKILPSLISETHSAFVEGRLISDNI 400

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           L+A E+FH ++ N + K +F  ++T   + YDRVEW F+  ++ ++  C  ++  IM C+
Sbjct: 401 LIAQEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKWISWIMWCI 460

Query: 570 SMVSFSILINGQP------------GNTFSP-IFILC 641
           + V + +L+NGQP            G+  SP +FILC
Sbjct: 461 TTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFILC 497



 Score = 76.3 bits (186), Expect(4) = 5e-94
 Identities = 39/99 (39%), Positives = 55/99 (55%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LF+ C E     +RK E      GI++   +P +SHL FA+DS+ F +AN  +  V   I
Sbjct: 493 LFILCTEVLIANIRKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCGVILGI 552

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREEIGAELAERLGV 921
           +K+YE   GQ IN  KS I F   V ++I AE+   LG+
Sbjct: 553 LKQYEAVSGQMINFSKSSIQFGHKVGDDIKAEIKSALGI 591



 Score = 60.5 bits (145), Expect(4) = 5e-94
 Identities = 30/74 (40%), Positives = 44/74 (59%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L  P T+DEV AAL  MHP KA  PDG  A+F++K W+ ++ D++ ++   L      K 
Sbjct: 274 LTTPATEDEVRAALFLMHPEKAPGPDGMTALFFQKPWATIKMDMLFLVNSFLQDGVFDKQ 333

Query: 188 FNHTFLALIPKKKK 229
            N T + LIPK ++
Sbjct: 334 LNTTNICLIPKTER 347


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 1152

 Score =  163 bits (413), Expect(4) = 2e-93
 Identities = 73/161 (45%), Positives = 105/161 (65%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +PT +  S                  W+ K LS  GK +L+K+V Q+IPTY++SCF+
Sbjct: 508  YLGLPTELSYSKDEAFRYLIDRVRKRTQGWRDKTLSGVGKEVLLKAVIQSIPTYVMSCFE 567

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            LP  +C +++ L++ FWW +  D+RKIHW AW+KLC+SK  GGLGFRD+  FN A+L KQ
Sbjct: 568  LPRHLCNEMHQLMARFWWGEFGDERKIHWIAWDKLCSSKKEGGLGFRDMHVFNKALLAKQ 627

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WR++    SLLA  LK KYFP ++ ++A++G   S++WRS
Sbjct: 628  GWRMLCRPQSLLAQVLKMKYFPTSSLIQAEVGKRISYSWRS 668



 Score =  126 bits (316), Expect(4) = 2e-93
 Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 13/157 (8%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K K  E+V + RPISLCNVIYKL SK +ANR+K +L  +I   QSAFV G LI+DN+
Sbjct: 249 LIPKVKSPEYVTQLRPISLCNVIYKLGSKVLANRIKPLLDDIISQQQSAFVPGRLISDNS 308

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           LLAFE+ H +K   + K     L+    + YDRVEW FL  V+ +L    +FV  IM C+
Sbjct: 309 LLAFEVSHCLKCRRSGKVGLCALKLDMSKAYDRVEWCFLEKVLGKLGFGDTFVRWIMHCI 368

Query: 570 SMVSFSILINGQP------------GNTFSP-IFILC 641
           + VS+S L+NG+P            G+  SP +F+LC
Sbjct: 369 TTVSYSFLVNGEPCGKLIPTRGLRQGDAISPYLFLLC 405



 Score = 88.2 bits (217), Expect(4) = 2e-93
 Identities = 47/99 (47%), Positives = 59/99 (59%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LFL CAE  S ++++ E  G   G+++C  AP ISHL+FADDS IF RA  R++     I
Sbjct: 401 LFLLCAEVLSRMIKQAETNGEIQGVKVCTDAPSISHLYFADDSFIFSRAEERDMLCMKDI 460

Query: 805 IKEYE*AYGQWINLEKSKISFSRGVREEIGAELAERLGV 921
              YE   GQ IN EKS +SFSR V      +LA  LGV
Sbjct: 461 FVTYETMSGQQINYEKSSVSFSRNVPLWKQHDLAAVLGV 499



 Score = 36.2 bits (82), Expect(4) = 2e-93
 Identities = 19/50 (38%), Positives = 30/50 (60%)
 Frame = +2

Query: 77  RPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKYFNHTFLALIPKKK 226
           R +GT  I  E+FW++V  DV++ + + LN     +  N T++ LIPK K
Sbjct: 207 RLNGT--ISEEEFWNVVGTDVVAAVREFLNSKELLREINCTWVTLIPKVK 254


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  160 bits (404), Expect(4) = 7e-93
 Identities = 76/161 (47%), Positives = 98/161 (60%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +P  +GRS                  WK KLLS AGK ILIK+VAQ IPT+ + CF+
Sbjct: 951  YLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFE 1010

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            L  D+C QI+ +I+ +WW  ++   K+HW +WNKL   K+ GGLGFRD+  FN AML KQ
Sbjct: 1011 LTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQ 1070

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WRL+   DSL +  L+AKYFP  +    K   N S+TWRS
Sbjct: 1071 GWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1111



 Score =  102 bits (255), Expect(4) = 7e-93
 Identities = 52/114 (45%), Positives = 75/114 (65%)
 Frame = +3

Query: 285  LISKTIANRLKLILPTLIHHTQSAFVLGHLITDNALLAFEIFHKMKHNHAKKKRFFRLQT 464
            LI K +ANRLK ILP +I   QSAFV G LI+DN L+A+E+ H M++  + +  +   + 
Sbjct: 717  LIPKVLANRLKKILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKL 776

Query: 465  RYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCVSMVSFSILINGQPGNTFSP 626
               + YDRVEW FL  +ML+L     +V+LIM+CVS V++ I +NG+   +FSP
Sbjct: 777  DMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSP 830



 Score = 87.0 bits (214), Expect(4) = 7e-93
 Identities = 49/95 (51%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +1

Query: 625  LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
            LFL CAE FS +L KTE  G  HGI+IC  AP +SHL FADDS+I  RAN  E Q    I
Sbjct: 844  LFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTI 903

Query: 805  IKEYE*AYGQWINLEKSKISFSRGVRE-EIGAELA 906
            ++ YE   GQ IN +KS + FS      E GA +A
Sbjct: 904  LQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMA 938



 Score = 62.4 bits (150), Expect(4) = 7e-93
 Identities = 31/73 (42%), Positives = 45/73 (61%)
 Frame = +2

Query: 2   ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
           E+L+  FT++EV  AL  +  +KA  PDG PA FY+  W +V   V   +L++L G A P
Sbjct: 648 ESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTVEVLEVLRGGAIP 707

Query: 182 KYFNHTFLALIPK 220
           + +N T + LIPK
Sbjct: 708 EGWNDTTIVLIPK 720


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  160 bits (404), Expect(4) = 7e-93
 Identities = 76/161 (47%), Positives = 98/161 (60%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +P  +GRS                  WK KLLS AGK ILIK+VAQ IPT+ + CF+
Sbjct: 947  YLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFE 1006

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            L  D+C QI+ +I+ +WW  ++   K+HW +WNKL   K+ GGLGFRD+  FN AML KQ
Sbjct: 1007 LTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQ 1066

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
             WRL+   DSL +  L+AKYFP  +    K   N S+TWRS
Sbjct: 1067 GWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1107



 Score =  102 bits (255), Expect(4) = 7e-93
 Identities = 52/114 (45%), Positives = 75/114 (65%)
 Frame = +3

Query: 285  LISKTIANRLKLILPTLIHHTQSAFVLGHLITDNALLAFEIFHKMKHNHAKKKRFFRLQT 464
            LI K +ANRLK ILP +I   QSAFV G LI+DN L+A+E+ H M++  + +  +   + 
Sbjct: 713  LIPKVLANRLKKILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKL 772

Query: 465  RYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCVSMVSFSILINGQPGNTFSP 626
               + YDRVEW FL  +ML+L     +V+LIM+CVS V++ I +NG+   +FSP
Sbjct: 773  DMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSP 826



 Score = 87.0 bits (214), Expect(4) = 7e-93
 Identities = 49/95 (51%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +1

Query: 625  LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
            LFL CAE FS +L KTE  G  HGI+IC  AP +SHL FADDS+I  RAN  E Q    I
Sbjct: 840  LFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTI 899

Query: 805  IKEYE*AYGQWINLEKSKISFSRGVRE-EIGAELA 906
            ++ YE   GQ IN +KS + FS      E GA +A
Sbjct: 900  LQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMA 934



 Score = 62.4 bits (150), Expect(4) = 7e-93
 Identities = 31/73 (42%), Positives = 45/73 (61%)
 Frame = +2

Query: 2   ETLQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATP 181
           E+L+  FT++EV  AL  +  +KA  PDG PA FY+  W +V   V   +L++L G A P
Sbjct: 644 ESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTVEVLEVLRGGAIP 703

Query: 182 KYFNHTFLALIPK 220
           + +N T + LIPK
Sbjct: 704 EGWNDTTIVLIPK 716


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  145 bits (367), Expect(4) = 7e-89
 Identities = 68/161 (42%), Positives = 95/161 (59%)
 Frame = +2

Query: 947  YLEIPTIIGRSXXXXXXXXXXXXXXXXXNWKGKLLSNAGKLILIKSVAQAIPTYIISCFQ 1126
            YL +PT IG +                  W  + LS AG   ++K+VAQAIP Y++SCF+
Sbjct: 765  YLGMPTEIGLATTNFFKFLPERIWKRVNGWTDRPLSRAGMETMLKAVAQAIPNYVMSCFR 824

Query: 1127 LPNDICQQINFLISSFWWDQRQDKRKIHWCAWNKLCNSKDNGGLGFRDLECFNDAMLVKQ 1306
            +P  IC+++   I+  WW     K+K+HW +W+ L   K  GG+GFR+   FN AML +Q
Sbjct: 825  IPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQ 884

Query: 1307 CWRLMNGTDSLLANSLKAKYFPRNNFLEAKMGYNPSFTWRS 1429
            CWRL+   DSL +  LK +YFP ++F EA    +PSFTWRS
Sbjct: 885  CWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRS 925



 Score =  124 bits (312), Expect(4) = 7e-89
 Identities = 67/157 (42%), Positives = 95/157 (60%), Gaps = 13/157 (8%)
 Frame = +3

Query: 210 LSQKRKKHEHVHEFRPISLCNVIYKLISKTIANRLKLILPTLIHHTQSAFVLGHLITDNA 389
           L  K     H+ +FRPISLCNV+YK+ SK +ANRLK  LP ++   QSAFV G LITD+A
Sbjct: 507 LIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLITDSA 566

Query: 390 LLAFEIFHKMKHNHAKKKRFFRLQTRYEQGYDRVEWRFLSTVMLRLYLCPSFVDLIMRCV 569
           L+A+E  H ++  H  K  FF L+    + YDRVEW +LS  + +L     +++ +MRCV
Sbjct: 567 LVAYECLHTIRKQH-NKNPFFALKIDMMKAYDRVEWAYLSGCLSKLGFSQDWINTVMRCV 625

Query: 570 SMVSFSILINGQ------------PGNTFSP-IFILC 641
           S V +++ ING+             G+  SP +F+LC
Sbjct: 626 SSVRYAVKINGELTKPVVPSRGIRQGDPISPYLFLLC 662



 Score = 75.9 bits (185), Expect(4) = 7e-89
 Identities = 39/83 (46%), Positives = 49/83 (59%)
 Frame = +1

Query: 625 LFLFCAEAFSLILRKTEMGGNNHGIQICNRAPHISHLFFADDSIIFGRANSREIQVTSHI 804
           LFL C E  S +L K E+ G   GI+     P ISHL FADDSI F +A+SR +Q   + 
Sbjct: 658 LFLLCTEGLSCLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNT 717

Query: 805 IKEYE*AYGQWINLEKSKISFSR 873
           ++ Y  A GQ INL KS I F +
Sbjct: 718 LRSYCSASGQKINLHKSSIFFGK 740



 Score = 52.4 bits (124), Expect(4) = 7e-89
 Identities = 25/71 (35%), Positives = 39/71 (54%)
 Frame = +2

Query: 8   LQRPFTKDEVVAALTQMHPIKALRPDGTPAIFYEKFWSIVQHDVISIILDILNGNATPKY 187
           L + +T +E+  AL QM   KA  PDG PA+FY+  W I++  + + +   L G   P+ 
Sbjct: 440 LGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEG 499

Query: 188 FNHTFLALIPK 220
              + + LIPK
Sbjct: 500 LCDSVVVLIPK 510