BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00023111
         (1050 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   306   7e-81
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              293   6e-77
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   293   6e-77
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...   289   1e-75
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   276   1e-71
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   276   1e-71
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no...   273   6e-71
gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus pe...   264   4e-68
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   261   3e-67
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   260   6e-67
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...   257   6e-66
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   251   3e-64
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme...   247   6e-63
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid...   247   6e-63
dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana]           247   6e-63
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   242   2e-61
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr...   241   3e-61
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps...   239   2e-60
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   238   4e-60
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   238   4e-60

>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 1110

 Score =  306 bits (785), Expect = 7e-81
 Identities = 159/304 (52%), Positives = 211/304 (69%), Gaps = 5/304 (1%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARS 869
            DFDGD YWVS+NP+LLKYF A +PW+R +S P++  + P  FS             E R 
Sbjct: 801  DFDGDKYWVSQNPQLLKYFTASRPWSRIHSTPKTLHREPNNFSAEEREHDLFQTFLETRM 860

Query: 868  PSFSMATAADSWLTYMDRLLILGDHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKV 698
            P++SMA A+ +W   MDRLLILG +  TE    KS+K+K+ +L+D+YYDA+DAPK+GNKV
Sbjct: 861  PNYSMADASANWYALMDRLLILGKNNTTENEEIKSVKEKLFELIDLYYDAIDAPKSGNKV 920

Query: 697  PVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIP 518
             +P  L+VD FPH +++    SY S SVLG+IYD V+ FK+E     EI K+S F+V IP
Sbjct: 921  YIPKRLKVDKFPHFLQK--KESYHSTSVLGEIYDRVEKFKAEEPAAVEIKKLSAFEVGIP 978

Query: 517  EIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVI 338
            +  + +W+ RY NYR EM +ALN+  ESKND A++VIKKYKQLLYEAPDMEES + +  +
Sbjct: 979  DTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRSTTDM 1038

Query: 337  YDEAISIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLR 164
            Y++A++IY VTYDYA   G V KCGFAW+VAG+ALC L A   A    +K + + PS+L 
Sbjct: 1039 YNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAELHAKEHNQKVMAMSPSILH 1098

Query: 163  DLLN 152
             LLN
Sbjct: 1099 KLLN 1102


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  293 bits (751), Expect = 6e-77
 Identities = 154/302 (50%), Positives = 198/302 (65%), Gaps = 3/302 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDMYWVSRN +LL+YF+A +PW R  S      K P +FS               R 
Sbjct: 633  DFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRF 692

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPV 692
              S ++  AAD+WL +MDRLL L D C+ EK+ LK KM++L DIYYDALDAPK+G KV V
Sbjct: 693  QTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNV 752

Query: 691  PIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVP-IPE 515
              EL+ + FPH M  G +SSY S S+LGQIYD V++F+ E    KEIW++  F++  +P+
Sbjct: 753  SKELKAEKFPHFM--GRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQ 810

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
              +  WK RYD YR EMA AL  G E+K++ A EVI KYKQ+LY A + EESP++ E I+
Sbjct: 811  ACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIF 870

Query: 334  DEAISIYHVTYDYAM-GHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
            DEA++IYHVTY++ + G  V  C F WRVAG ALC L   KL    EK +V +PSVLR +
Sbjct: 871  DEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLG---EKSMVCVPSVLRQV 927

Query: 157  LN 152
             N
Sbjct: 928  FN 929


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  293 bits (751), Expect = 6e-77
 Identities = 154/302 (50%), Positives = 198/302 (65%), Gaps = 3/302 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDMYWVSRN +LL+YF+A +PW R  S      K P +FS               R 
Sbjct: 647  DFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRF 706

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPV 692
              S ++  AAD+WL +MDRLL L D C+ EK+ LK KM++L DIYYDALDAPK+G KV V
Sbjct: 707  QTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNV 766

Query: 691  PIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVP-IPE 515
              EL+ + FPH M  G +SSY S S+LGQIYD V++F+ E    KEIW++  F++  +P+
Sbjct: 767  SKELKAEKFPHFM--GRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQ 824

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
              +  WK RYD YR EMA AL  G E+K++ A EVI KYKQ+LY A + EESP++ E I+
Sbjct: 825  ACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIF 884

Query: 334  DEAISIYHVTYDYAM-GHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
            DEA++IYHVTY++ + G  V  C F WRVAG ALC L   KL    EK +V +PSVLR +
Sbjct: 885  DEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLG---EKSMVCVPSVLRQV 941

Query: 157  LN 152
             N
Sbjct: 942  FN 943


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            lycopersicum]
          Length = 1011

 Score =  289 bits (740), Expect = 1e-75
 Identities = 147/299 (49%), Positives = 200/299 (66%), Gaps = 1/299 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARS 869
            DFDGDMYWVS N +L+  +   +PW R +S P +  K P EFS             EA+S
Sbjct: 716  DFDGDMYWVSINRKLVDSYTTSRPWIRMHSTPNAVSKKPSEFSADELEYELFRQFLEAKS 775

Query: 868  PSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVP 689
               +M+ AADSWL +MDRLL L D    +  SLK KM+ L+DIYYDALDAPK+G KV +P
Sbjct: 776  KGANMSLAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIP 835

Query: 688  IELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIY 509
              L+ + FPH+ME+G   SY S S+LGQIYD V ++  E +   EI K+ CF+V IP+  
Sbjct: 836  HYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKLPCFEVEIPQRC 895

Query: 508  VEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDE 329
            + +W+ RY+ Y+K+M +A+N   E +  + NEVIKKYK LLY A + E++ + +E I+DE
Sbjct: 896  MTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKTEDIFDE 955

Query: 328  AISIYHVTYDYA-MGHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 155
            A++IYHVTYD A + + +EKCGFAW+VAGSALC + A      KEK + ILPSVL+++L
Sbjct: 956  ALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMY---RKEKDLPILPSVLQEIL 1011


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  276 bits (705), Expect = 1e-71
 Identities = 142/301 (47%), Positives = 194/301 (64%), Gaps = 3/301 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDM++VSRNP+LL+ FK  +PWT S S P    + P EFSD              R 
Sbjct: 580  DFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRF 639

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNK-VP 695
             PS ++  AADSWL  MDRLL LG+ CA E   +K+ +  L+DIYYDALDAPK G + + 
Sbjct: 640  QPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIE 699

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPE 515
            VP  L+ ++FPH M +    +YRS S+LG+IYD V+A++   +   ++WK+ CFD  + E
Sbjct: 700  VPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHE 759

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
            +Y+  WK  Y  YRKEM  AL +G+ES ND ANEVI+KYK+ LYEA +   S +  E I+
Sbjct: 760  LYLVKWKELYGQYRKEMRNALKAGEES-NDKANEVIRKYKEFLYEAAEFNLSKRRDEEIF 818

Query: 334  DEAISIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
            +EA+++Y V+Y++A   G V  C FAWRVAG ALC+L   K  G  E+P++  PS L+ +
Sbjct: 819  EEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQG--ERPMICSPSALKGI 876

Query: 157  L 155
            L
Sbjct: 877  L 877


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  276 bits (705), Expect = 1e-71
 Identities = 142/301 (47%), Positives = 194/301 (64%), Gaps = 3/301 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDM++VSRNP+LL+ FK  +PWT S S P    + P EFSD              R 
Sbjct: 602  DFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRF 661

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNK-VP 695
             PS ++  AADSWL  MDRLL LG+ CA E   +K+ +  L+DIYYDALDAPK G + + 
Sbjct: 662  QPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIE 721

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPE 515
            VP  L+ ++FPH M +    +YRS S+LG+IYD V+A++   +   ++WK+ CFD  + E
Sbjct: 722  VPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHE 781

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
            +Y+  WK  Y  YRKEM  AL +G+ES ND ANEVI+KYK+ LYEA +   S +  E I+
Sbjct: 782  LYLVKWKELYGQYRKEMRNALKAGEES-NDKANEVIRKYKEFLYEAAEFNLSKRRDEEIF 840

Query: 334  DEAISIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
            +EA+++Y V+Y++A   G V  C FAWRVAG ALC+L   K  G  E+P++  PS L+ +
Sbjct: 841  EEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQG--ERPMICSPSALKGI 898

Query: 157  L 155
            L
Sbjct: 899  L 899


>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
          Length = 521

 Score =  273 bits (699), Expect = 6e-71
 Identities = 149/319 (46%), Positives = 195/319 (61%), Gaps = 21/319 (6%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDM+WVSRNPELLKYFK   PW + +S  + + K P + SD              R 
Sbjct: 207  DFDGDMFWVSRNPELLKYFKPSDPWIKKSSTGKVKSKQPIDLSDRELEDELIKLFLTVRF 266

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNK--- 701
             PSF+ + A++ WL  MDR L LGD C  EK ++KD + +LVDIYYDALDAPK G K   
Sbjct: 267  KPSFAKSEASEGWLALMDRFLTLGDDCVAEKNAVKDNLFELVDIYYDALDAPKQGGKQQD 326

Query: 700  ----------------VPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEA 569
                            V VP EL+ + FPH+ME+   +S+ S S+LG IYD V A++ E 
Sbjct: 327  LAKFFEAYAALELSFQVEVPRELKPNRFPHYMEK--QNSFHSRSILGWIYDEVDAYQLED 384

Query: 568  VPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQL 389
               KEI+K+  F+V +PE  +  WKA Y +YR +M  AL + D  K +AA EV +KYK+L
Sbjct: 385  HSNKEIFKLPHFEVEVPEACLTKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRL 444

Query: 388  LYEAPDMEESPKDSEVIYDEAISIYHVTYDYAMG-HGVEKCGFAWRVAGSALCSLCAWKL 212
            LY A ++EES K  E IY+EA++IYHV YDYA+    V  C FAW +AGSAL  L A+K 
Sbjct: 445  LYGAEELEESTKKMEEIYNEALAIYHVCYDYAISQRKVSYCSFAWNIAGSALLKLHAFKK 504

Query: 211  AGPKEKPIVILPSVLRDLL 155
             G  E+    LPSVL+++L
Sbjct: 505  IG--ERAFFCLPSVLKEVL 521


>gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score =  264 bits (675), Expect = 4e-68
 Identities = 145/303 (47%), Positives = 199/303 (65%), Gaps = 5/303 (1%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTR-SNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR 872
            DFDGD+YWVSRNP+LL+ FK  +PW   S+S P+     P E               + R
Sbjct: 501  DFDGDLYWVSRNPQLLECFKPSEPWIEASSSTPKVASTRPSELLPNHIEDALIKLFLKTR 560

Query: 871  -SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVP 695
              PSF+M+ A+DSWL  MDRLLILGD   +EK  +K  M++LVD+YY+ALDAPK G KV 
Sbjct: 561  FEPSFAMSEASDSWLAMMDRLLILGDSSNSEKTHVKANMLRLVDLYYEALDAPKKGGKVV 620

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPE 515
            VP EL+ ++FPH+MER   +SY+S S+LG IYD V A+++E    KE+ K+  FDV +PE
Sbjct: 621  VPGELKSNLFPHYMER--VNSYKSTSILGLIYDTVNAYQAEDASIKEVKKLPMFDVEVPE 678

Query: 514  IYVEMWKARYDNYRKEMAKALNSGD-ESKNDAANEVIKKYKQLLY-EAPDMEESPKDSEV 341
              ++ W+  Y +YR EM+ A+   D +SKN+AA++V++KYK++LY  A D+E S +    
Sbjct: 679  ECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILYGGAEDLENSTRPLHE 738

Query: 340  IYDEAISIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLR 164
            I+DEA++IY VTYD+A+  G V KC FAW+VAGSALC     K      + I    SVL+
Sbjct: 739  IFDEALAIYRVTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGA---RTIEASFSVLK 795

Query: 163  DLL 155
            DL+
Sbjct: 796  DLV 798


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  261 bits (667), Expect = 3e-67
 Identities = 137/299 (45%), Positives = 187/299 (62%), Gaps = 2/299 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDMYWVSRN +LL+YF+  +PW  S S      K P+EFS               R 
Sbjct: 761  DFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRF 820

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNK-VP 695
             PS++ + AAD+WL  MD+ L+LG+    E+  ++ K++QL++IYYDALDAPK G K + 
Sbjct: 821  QPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIE 880

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPE 515
            VP  L+    PH MERG  +SY S S+LGQI+D    ++ E VP  E+ K+ CF+  +PE
Sbjct: 881  VPKHLKAGTLPHFMERG-KNSYVSTSILGQIFDTANMYQEE-VPNIEVQKLPCFEEELPE 938

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
                 WK  Y+ YRK+M  A+    ++KN AA   IKKYK++LY A ++E SP+ +E +Y
Sbjct: 939  YIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVY 998

Query: 334  DEAISIYHVTYDYAMGHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
             EA++IY VTYD+AM   V  CGFAW+VAGSAL  L A K     E+    LPSV+R++
Sbjct: 999  QEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFKLYAIK---HSERSFHCLPSVMREI 1054


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  260 bits (665), Expect = 6e-67
 Identities = 141/305 (46%), Positives = 194/305 (63%), Gaps = 8/305 (2%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPW------TRSNSVPQSEKKNPQEFSDXXXXXXXXXX 887
            DFDGDMY++SRNPELL++FK  +PW      ++SNS     + +P+E  +          
Sbjct: 686  DFDGDMYFISRNPELLEHFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLKAG 745

Query: 886  XXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTG 707
               +      +  AADSWLT MDRLLILGD  A EK  +K KM++L+DIYYDALDAPK G
Sbjct: 746  FHASNV----IGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKG 801

Query: 706  NKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQA-FKSEAVPQKEIWKMSCF- 533
            +KV +P ELR D+FPH+MER  +  ++S S+LG IYD V++    E  P  EI K+ CF 
Sbjct: 802  DKVYLPNELRPDIFPHYMER--EKKFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCFE 859

Query: 532  DVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPK 353
            D P+ E ++E  +  YDNYR EM +A+ +    K+++ANEVI++YKQ  Y A   E+S K
Sbjct: 860  DEPVSEFHMEKCRRWYDNYRSEMTQAMKT---DKDESANEVIQRYKQEFYGAAGFEDSKK 916

Query: 352  DSEVIYDEAISIYHVTYDYAMGHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPS 173
              E +Y +A+++Y + YDYA+  GV KCGF W+VAG  LC     K    +EK +V  PS
Sbjct: 917  SLEELYPQALTLYKIVYDYAIHAGVSKCGFVWKVAGPVLCRFYLMKKM--QEKSLVCAPS 974

Query: 172  VLRDL 158
            VL++L
Sbjct: 975  VLKEL 979


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
            gi|548857326|gb|ERN15132.1| hypothetical protein
            AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  257 bits (656), Expect = 6e-66
 Identities = 144/300 (48%), Positives = 189/300 (63%), Gaps = 2/300 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDMYW+S NPELL YFKA  PW RS+S     ++ P E+S             E+R 
Sbjct: 695  DFDGDMYWISTNPELLHYFKAGPPWERSSSEKPPPQRKPIEYSPDELETELFDLFLESRF 754

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPV 692
             PS +   AADSWL YMDRLL LGD CA EK  L  KM++L D+YY+A+DAPK+G KV V
Sbjct: 755  HPSIAKCAAADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEV 814

Query: 691  PIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEI 512
            P +L+ + +PH MER     Y S S+LGQIYD+V + + + VP ++I  + CF   +   
Sbjct: 815  PKDLKPERYPHFMER--TYQYTSTSILGQIYDLVASAQMD-VPCEDIELLPCFLEEVEPS 871

Query: 511  YVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYD 332
             +E WK  Y  YR EM KAL+S D+ K++ A+EVI+ YK++LY A + EE  +  E I+ 
Sbjct: 872  GMEKWKGLYAQYRDEMNKALSSTDQKKSN-ADEVIQNYKKILYGAQEYEERTRPREEIFR 930

Query: 331  EAISIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 155
            EA  IY ++Y YA     + KCGFAW+VAG ALC L A K    K+  I  L SVL++LL
Sbjct: 931  EACEIYAISYFYAKEKSDIAKCGFAWKVAGCALCELHALK---QKKNSITCLSSVLQELL 987


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
            gi|550336519|gb|ERP59562.1| hypothetical protein
            POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  251 bits (641), Expect = 3e-64
 Identities = 139/301 (46%), Positives = 184/301 (61%), Gaps = 3/301 (0%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDM++VSRNP LL+ FK  +PWT S S P    + P EFSD              R 
Sbjct: 580  DFDGDMFFVSRNPRLLENFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRF 639

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKT-GNKVP 695
             PSF++  AADSWL  MDRLL LG+ C  E   +K  +  L+DIYYDALDAPK  G K+ 
Sbjct: 640  QPSFTVGVAADSWLAMMDRLLTLGNDCTEEIACVKKNINLLIDIYYDALDAPKKGGRKIE 699

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPE 515
            VP  L+ ++FPH ME+    +YRS S+LG+IYD V+A++   +              + E
Sbjct: 700  VPEALKAELFPHFMEKHEKKTYRSTSILGKIYDKVKAYEDMDLSSN-----------VHE 748

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
              +  WK  Y  YR EM  AL +G E KN+ ANEVIKKYK++LYEA +   S +  E I+
Sbjct: 749  SCLVKWKGLYGQYRTEMRNALQAGKE-KNNEANEVIKKYKEILYEAAEFNLSRRRDEEIF 807

Query: 334  DEAISIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
            +EA ++Y VTY++A   G V KCGFAWRVAG ALC+L  + L   +E+P++  PS L+ +
Sbjct: 808  EEARALYQVTYNHAKRQGAVGKCGFAWRVAGLALCTL--YVLKNQEERPLICSPSALKGI 865

Query: 157  L 155
            L
Sbjct: 866  L 866


>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1405

 Score =  247 bits (630), Expect = 6e-63
 Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 5/303 (1%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSN-SVPQSEKKNPQEFSDXXXXXXXXXXXXEAR 872
            DFDGD+YWVSRNP+LL+++K  +PW  ++ S  ++  + P + S               R
Sbjct: 1108 DFDGDLYWVSRNPQLLEWYKPSEPWIEASISTKKNPSRCPSDHSPEDLEDVLFRSFLTTR 1167

Query: 871  -SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVP 695
              PSF+M+ AAD+WL +MD  L LGD    EK ++K+K++QLVD+YY ALDA K G KV 
Sbjct: 1168 FEPSFAMSEAADNWLAWMDHFLTLGDSNIHEKNNVKEKILQLVDLYYTALDAAKKGVKVD 1227

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDV-PIP 518
            VP EL+V  FPH+M  G + SY S S+LG IY+ V   ++E    KE+ K+  FD   +P
Sbjct: 1228 VPKELKVSCFPHYM--GKNRSYPSTSILGSIYNRVDEHQTEDRSLKEVEKLPAFDENEVP 1285

Query: 517  EIYVEMWKARYDNYRKEMAKALNSGD-ESKNDAANEVIKKYKQLLYEAPDMEESPKDSEV 341
            +  ++ W   +  YRKEMA AL+  D +SKN +A+ VI+KY+++LYEA D EES +  E 
Sbjct: 1286 DACLDKWAELHRQYRKEMASALDDDDKQSKNQSADVVIRKYRKILYEANDFEESRRPIEE 1345

Query: 340  IYDEAISIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLR 164
            IY+EA +IYHV YD+A   G V+ C FAWRVAG ALC L A       E+   I+ SVL 
Sbjct: 1346 IYNEAHAIYHVCYDHAKRVGNVKVCSFAWRVAGKALCQLHA---RNNNERFCTIVSSVLM 1402

Query: 163  DLL 155
            ++L
Sbjct: 1403 EIL 1405


>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
            polymerase 5 [Arabidopsis thaliana]
          Length = 977

 Score =  247 bits (630), Expect = 6e-63
 Identities = 136/305 (44%), Positives = 191/305 (62%), Gaps = 8/305 (2%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPW------TRSNSVPQSEKKNPQEFSDXXXXXXXXXX 887
            DFDGDMY++SRNPELL+ FK  +PW      ++SNS     + +P+E  +          
Sbjct: 682  DFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAG 741

Query: 886  XXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTG 707
               +      +  AADSWLT MDR LILGD  A EK  +K KM++L+DIYYDALDAPK G
Sbjct: 742  FHASNV----IGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKG 797

Query: 706  NKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQA-FKSEAVPQKEIWKMSCF- 533
            +KV +P +L+ D+FPH+MER  D  ++S S+LG I+D V++    E  P  EI K+ CF 
Sbjct: 798  DKVYLPNKLKPDIFPHYMER--DKKFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCFE 855

Query: 532  DVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPK 353
            D P+ E +++  +  YDNYR EM +A+ +    K+++ANEVI++YKQ  Y A   E+S K
Sbjct: 856  DEPVSEFHMQKCRLWYDNYRTEMTQAMKT---DKDESANEVIQRYKQEFYGAAGFEDSKK 912

Query: 352  DSEVIYDEAISIYHVTYDYAMGHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPS 173
              E +Y +A+++Y + YDYA+  GV KC F W+VAG  LC     K    +EK +V  PS
Sbjct: 913  SLEELYPQALALYKIVYDYAIHAGVSKCRFVWKVAGPVLCRFYLNKKM--QEKCLVCAPS 970

Query: 172  VLRDL 158
            VL++L
Sbjct: 971  VLKEL 975


>dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana]
          Length = 339

 Score =  247 bits (630), Expect = 6e-63
 Identities = 136/305 (44%), Positives = 191/305 (62%), Gaps = 8/305 (2%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPW------TRSNSVPQSEKKNPQEFSDXXXXXXXXXX 887
            DFDGDMY++SRNPELL+ FK  +PW      ++SNS     + +P+E  +          
Sbjct: 44   DFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAG 103

Query: 886  XXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTG 707
               +      +  AADSWLT MDR LILGD  A EK  +K KM++L+DIYYDALDAPK G
Sbjct: 104  FHASNV----IGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKG 159

Query: 706  NKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQA-FKSEAVPQKEIWKMSCF- 533
            +KV +P +L+ D+FPH+MER  D  ++S S+LG I+D V++    E  P  EI K+ CF 
Sbjct: 160  DKVYLPNKLKPDIFPHYMER--DKKFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCFE 217

Query: 532  DVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPK 353
            D P+ E +++  +  YDNYR EM +A+ +    K+++ANEVI++YKQ  Y A   E+S K
Sbjct: 218  DEPVSEFHMQKCRLWYDNYRTEMTQAMKT---DKDESANEVIQRYKQEFYGAAGFEDSKK 274

Query: 352  DSEVIYDEAISIYHVTYDYAMGHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPS 173
              E +Y +A+++Y + YDYA+  GV KC F W+VAG  LC     K    +EK +V  PS
Sbjct: 275  SLEELYPQALALYKIVYDYAIHAGVSKCRFVWKVAGPVLCRFYLNKKM--QEKCLVCAPS 332

Query: 172  VLRDL 158
            VL++L
Sbjct: 333  VLKEL 337


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  242 bits (618), Expect = 2e-61
 Identities = 135/282 (47%), Positives = 173/282 (61%), Gaps = 2/282 (0%)
 Frame = -3

Query: 991  KAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR-SPSFSMATAADSWLTYMDR 815
            +A +PW R  S      K P +FS               R   S ++  AAD+WL +MDR
Sbjct: 935  EASEPWMRKXSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDR 994

Query: 814  LLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDS 635
            LL L D C+ EK+ LK KM++L DIYYDALDAPK+G KV V  EL+ + FPH M  G +S
Sbjct: 995  LLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFM--GRES 1052

Query: 634  SYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKA 455
            SY S S+LGQIYD V++F+ E    K+          +P+  +  WK RYD YR EMA A
Sbjct: 1053 SYHSTSILGQIYDAVESFQPENQSTKDA---------VPQACLRSWKDRYDQYRSEMAAA 1103

Query: 454  LNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAISIYHVTYDYAM-GHGV 278
            L  G E+K++ A EVI KYKQ+LY A + EESP+  E I+DEA++IYHVTY++A+ G  V
Sbjct: 1104 LQHGGETKDEYAAEVINKYKQILYGAAEFEESPRKLEDIFDEALAIYHVTYEFAINGARV 1163

Query: 277  EKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLLN 152
              C F WRVAG ALC L   KL    EK +V +PSVLR + N
Sbjct: 1164 SYCNFPWRVAGRALCKLYTVKLG---EKSMVCVPSVLRQVFN 1202


>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
            gi|557110064|gb|ESQ50361.1| hypothetical protein
            EUTSA_v10001897mg [Eutrema salsugineum]
          Length = 988

 Score =  241 bits (616), Expect = 3e-61
 Identities = 139/302 (46%), Positives = 187/302 (61%), Gaps = 5/302 (1%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEK-KNPQEFSDXXXXXXXXXXXXEAR 872
            DFDGDMY++SRNPELL+ FK  +PW   +   +S   + P +FS             +AR
Sbjct: 694  DFDGDMYFISRNPELLEQFKPSEPWVSLSPPSKSNSTRKPIDFSPEELEEELFDMFLKAR 753

Query: 871  SPSFSM-ATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVP 695
              S ++   AADSWLT MDR L LGD  A EK  +K KM+ L+DIYYDALDA K G KV 
Sbjct: 754  FHSSNVIGMAADSWLTIMDRFLTLGDERAEEKAEMKRKMLSLIDIYYDALDAAKKGVKVS 813

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEA-VPQKEIWKMSCF-DVPI 521
            +P  L+ D+FPH+MER  D  ++S S+LG IYD VQ+  +E   P  EI K+ CF D P+
Sbjct: 814  LPDALKPDIFPHYMER--DKKFKSTSILGIIYDFVQSQTAEEHTPSSEISKLQCFEDEPV 871

Query: 520  PEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEV 341
             E + E  +  YDNYR EM +AL+    +K+D A+EVI+KYKQ  Y A   E+S K  E 
Sbjct: 872  SEFHKEKCRPWYDNYRAEMIQALS----NKDDTASEVIEKYKQEFYGAAGFEDSKKSLEE 927

Query: 340  IYDEAISIYHVTYDYAMG-HGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLR 164
            +Y +A+++Y++ YDYA+    V KCGFAW+VAG  LC     K  G   K ++   S+L+
Sbjct: 928  LYPQALALYNIVYDYAIEMKSVRKCGFAWKVAGPVLCRFYLKKTGG---KALLCSLSMLK 984

Query: 163  DL 158
            +L
Sbjct: 985  EL 986


>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
            gi|482565615|gb|EOA29804.1| hypothetical protein
            CARUB_v10012898mg [Capsella rubella]
          Length = 982

 Score =  239 bits (609), Expect = 2e-60
 Identities = 133/301 (44%), Positives = 185/301 (61%), Gaps = 4/301 (1%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEK-KNPQEFSDXXXXXXXXXXXXEAR 872
            DFDGD+Y++SRNPELL++FK  +PW       +S   + P +FS             +A 
Sbjct: 689  DFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSNSARGPCQFSPEELEEELFEMFLKAG 748

Query: 871  -SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVP 695
               S  +  AADSWLT MDR LILGD  A EK  +K KM++L+DIYYDALDAPK G KV 
Sbjct: 749  FHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVY 808

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQA-FKSEAVPQKEIWKMSCF-DVPI 521
            +P ELR D+FPH+MER  D  ++S S+LG IYD VQ+    +  P  EI K+ CF D P+
Sbjct: 809  LPNELRPDIFPHYMER--DKKFKSTSILGLIYDFVQSQTTKQPSPPSEINKLPCFEDEPV 866

Query: 520  PEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEV 341
             E +++  +  YD Y+ EM  A+N+   +K    NE+I++ K+  Y A   EES K  E 
Sbjct: 867  SEFHMKECRRWYDEYKDEMTHAMNTDASNK----NEIIERCKEDFYGAASFEESKKSLEE 922

Query: 340  IYDEAISIYHVTYDYAMGHGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRD 161
            +Y +A+++Y++ YD+A   GV +CGF W+VAG     LC + L    EK +V  PSVL++
Sbjct: 923  LYPQALALYNIVYDHATHAGVSRCGFVWKVAGPV---LCRFYLKKRHEKTLVSSPSVLKE 979

Query: 160  L 158
            +
Sbjct: 980  I 980


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  238 bits (606), Expect = 4e-60
 Identities = 135/300 (45%), Positives = 185/300 (61%), Gaps = 3/300 (1%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDMY+VSRNPELLK+FK  + W  S S   S  K P +FS               R 
Sbjct: 716  DFDGDMYFVSRNPELLKHFKESERWM-STSKNLSANKRPIDFSLEELESELFKLFLNTRF 774

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPK-TGNKVP 695
             PS + + AAD W   MDR L LGD  A EK ++K+ M++L++IYYDALDAPK +G KV 
Sbjct: 775  CPSNAKSLAADCWQAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVE 834

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPE 515
            VP +L+V+ FP +M R    S+ S SVLG IY+ V+++++      EIWK+ CFD  +PE
Sbjct: 835  VPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPCFDDGVPE 894

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
              +  WK  YD YR EM +A++     + +AA  VI+KYKQ+LY A + E+S +  E IY
Sbjct: 895  ACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTLEEIY 954

Query: 334  DEAISIYHVTYDYAMG-HGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
            +EA++IY++TYD A     V  C FAWRVAGSAL    A +     ++ ++   SVLR++
Sbjct: 955  NEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQG---DRSMLCSASVLREI 1011


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  238 bits (606), Expect = 4e-60
 Identities = 135/300 (45%), Positives = 185/300 (61%), Gaps = 3/300 (1%)
 Frame = -3

Query: 1048 DFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEAR- 872
            DFDGDMY+VSRNPELLK+FK  + W  S S   S  K P +FS               R 
Sbjct: 718  DFDGDMYFVSRNPELLKHFKESERWM-STSKNLSANKRPIDFSLEELESELFKLFLNTRF 776

Query: 871  SPSFSMATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPK-TGNKVP 695
             PS + + AAD W   MDR L LGD  A EK ++K+ M++L++IYYDALDAPK +G KV 
Sbjct: 777  CPSNAKSLAADCWQAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVE 836

Query: 694  VPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPE 515
            VP +L+V+ FP +M R    S+ S SVLG IY+ V+++++      EIWK+ CFD  +PE
Sbjct: 837  VPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPCFDDGVPE 896

Query: 514  IYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIY 335
              +  WK  YD YR EM +A++     + +AA  VI+KYKQ+LY A + E+S +  E IY
Sbjct: 897  ACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTLEEIY 956

Query: 334  DEAISIYHVTYDYAMG-HGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDL 158
            +EA++IY++TYD A     V  C FAWRVAGSAL    A +     ++ ++   SVLR++
Sbjct: 957  NEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQG---DRSMLCSASVLREI 1013