BLASTX nr result
ID: Rehmannia24_contig00023104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00023104
(463 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 174 1e-41
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 171 7e-41
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 167 1e-39
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 163 2e-38
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 163 3e-38
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 162 4e-38
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 162 4e-38
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 162 6e-38
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 162 6e-38
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 159 3e-37
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 158 8e-37
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 157 1e-36
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 157 1e-36
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 156 3e-36
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 156 3e-36
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 156 3e-36
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 156 3e-36
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 155 4e-36
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 155 5e-36
gb|AAB82754.1| retrofit [Oryza longistaminata] 155 7e-36
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 174 bits (441), Expect = 1e-41
Identities = 76/138 (55%), Positives = 102/138 (73%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T +QN +ERKHRHI+E+GL+LL+Q+ LP KYW DAFST+V+L+NR+P + ++ + PY
Sbjct: 468 PHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPY 527
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMPKGKI 361
E L KP Y L+ FGC CFP LRPYNK KLD RS P FLGYS++ KGYK L +G++
Sbjct: 528 EFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRM 587
Query: 362 LFTRHIVFNENEFPFLSK 415
+R +VF+E FPF +
Sbjct: 588 FISRSVVFDETRFPFADR 605
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 171 bits (434), Expect = 7e-41
Identities = 75/135 (55%), Positives = 100/135 (74%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T +QN +ERKHRHI+E+GL+LL+Q+ LP KYW DAFST V+L+NR+P + ++ + PY
Sbjct: 714 PHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTXVFLINRLPTEVLKQKCPY 773
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMPKGKI 361
E L KP Y L+ FGC CFP LRPYNK KLD RS P FLGYS++ KGYK L +G++
Sbjct: 774 EFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRM 833
Query: 362 LFTRHIVFNENEFPF 406
+R + F+E +FPF
Sbjct: 834 FISRSVXFDETKFPF 848
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 167 bits (423), Expect = 1e-39
Identities = 76/135 (56%), Positives = 96/135 (71%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
PYT +QN ERKHRHI+E G++LL+Q+ LP KYWD+AF TSVYL+NR+P ++ +SP
Sbjct: 656 PYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPL 715
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMPKGKI 361
EVL KP+Y L+ FGC C+P LRP+N KL RS P FLGYS KGYK L P G I
Sbjct: 716 EVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNI 775
Query: 362 LFTRHIVFNENEFPF 406
L +R ++F+E FPF
Sbjct: 776 LISRDVIFDEXAFPF 790
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 163 bits (413), Expect = 2e-38
Identities = 77/138 (55%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN + ERKHRHI+EVGLSLL+ + +P K+WD+AF + YL+NR P+K IQY +P
Sbjct: 598 PHTHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINRTPSKVIQYETPL 657
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
E L KP+Y LR FGC C+P LRPYN KL RS+ VFLGYSN KG+K L + G+
Sbjct: 658 EHLFHQKPSYTSLRVFGCACWPNLRPYNARKLQFRSKQCVFLGYSNLHKGFKCLDVAAGR 717
Query: 359 ILFTRHIVFNENEFPFLS 412
+ +R +VF+EN FPF S
Sbjct: 718 VYISRDVVFDENVFPFAS 735
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 163 bits (412), Expect = 3e-38
Identities = 77/136 (56%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN + ERKHRHIIEVGLSLLS + +P K+WD+AF + YL+NR+P+KTIQ +P
Sbjct: 607 PHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPL 666
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
E L KP YL LR FGC C+P LRPYN KL RS+ VFLG+S KG+K L + G+
Sbjct: 667 EKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGR 726
Query: 359 ILFTRHIVFNENEFPF 406
+ +R +VF+EN FPF
Sbjct: 727 VYISRDVVFDENIFPF 742
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 162 bits (410), Expect = 4e-38
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
PYTP+QN ERK RHIIE GL+LL+ + LP K+W AF T+++L+NR+P K + Y+SP+
Sbjct: 670 PYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPF 729
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMP-KGK 358
++L G P Y + FGC C+P++RPYNK+KL RS VFLGYS+ KGY L P G+
Sbjct: 730 QILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGR 789
Query: 359 ILFTRHIVFNENEFPFLSKGGDTEVVSRVP 448
+ TRH+VF+E FPF S + V +P
Sbjct: 790 LYVTRHVVFHETVFPFQSTPDQSSSVVTIP 819
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 162 bits (410), Expect = 4e-38
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
PYTP+QN ERK RHIIE GL+LL+ + LP K+W AF T+++L+NR+P K + Y+SP+
Sbjct: 479 PYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTIFLINRLPTKVLNYQSPF 538
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMP-KGK 358
++L G P Y + FGC C+P++RPYNK+KL RS VFLGYS+ KGY L P G+
Sbjct: 539 QILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGR 598
Query: 359 ILFTRHIVFNENEFPFLSKGGDTEVVSRVP 448
+ TRH+VF+E FPF S + V +P
Sbjct: 599 LYVTRHVVFHETVFPFQSTPDQSSSVVTIP 628
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 162 bits (409), Expect = 6e-38
Identities = 76/136 (55%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
PY QQN + ERKHRHI+EVGL+LL+ + +P K+WD+AF + YL+NR+P+K IQY +P
Sbjct: 218 PYAHQQNGSAERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLINRLPSKVIQYSAPL 277
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
E L KP Y LR FGC C+P LRPYNK KL+ RS+ VFLGYSN KG+K L + G+
Sbjct: 278 ERLLDQKPNYSALRTFGCACWPNLRPYNKRKLEFRSKQCVFLGYSNIHKGFKCLDVSTGR 337
Query: 359 ILFTRHIVFNENEFPF 406
+ +R +VF+EN FPF
Sbjct: 338 VYISRDVVFDENVFPF 353
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 162 bits (409), Expect = 6e-38
Identities = 77/136 (56%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
PY QQN + ERKHRHI+EVGLSLL+ + +P K+WD+AF T+ YL+NR P+K IQY +P
Sbjct: 522 PYAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPSKVIQYSTPL 581
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
E L KP Y LR FGC C+P LRPYN KL RS+ VFLGYSN KG+K L + G+
Sbjct: 582 ERLLNQKPNYSSLRTFGCACWPNLRPYNNRKLQFRSKQCVFLGYSNIHKGFKCLDVATGR 641
Query: 359 ILFTRHIVFNENEFPF 406
+ +R +VF+EN FPF
Sbjct: 642 VYISRDVVFDENIFPF 657
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 159 bits (403), Expect = 3e-37
Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 3/151 (1%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN ERKHRHI+EVGL+LL+QS +P KYWD AF +VYL+NR P+KTI + +P
Sbjct: 607 PHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDTPL 666
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
L G P Y LR FGC C+P LRPYN+ KL RS VFLGYSN KG+K L + G+
Sbjct: 667 HKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGR 726
Query: 359 ILFTRHIVFNENEFPF--LSKGGDTEVVSRV 445
I +R +VF+E+ FPF L+K + S V
Sbjct: 727 IYISRDVVFDEHVFPFASLNKNAGVKYTSEV 757
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 158 bits (399), Expect = 8e-37
Identities = 74/137 (54%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKT-IQYRSP 178
P+TPQQN ER+HRHI+E+GLSLL QS P+KYW +AF T+ +L N +P+ SP
Sbjct: 615 PHTPQQNGLAERRHRHIVELGLSLLFQSRAPQKYWVEAFMTANFLSNLLPHSANTNTASP 674
Query: 179 YEVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMP-KG 355
YE LH P+Y LR FGC CFP LRPY ++KLD RS VFLGYS ++KGY+ L+P G
Sbjct: 675 YEKLHNKSPSYDALRIFGCACFPMLRPYTQNKLDPRSLQCVFLGYSEKYKGYRCLLPATG 734
Query: 356 KILFTRHIVFNENEFPF 406
++ +RH++F+E++FPF
Sbjct: 735 RVYISRHVIFDESKFPF 751
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 157 bits (397), Expect = 1e-36
Identities = 69/147 (46%), Positives = 102/147 (69%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+ QN +ERKHRHI+++GL+LL+Q+ LP K+W +AF T+V+L+NR+P T+ SPY
Sbjct: 73 PHIHHQNGRIERKHRHIVDIGLTLLAQANLPLKFWWNAFHTAVFLINRLPTPTLNNISPY 132
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMPKGKI 361
+ L P Y+ LR FGC CFP+LRPYN+ KL RS VF+GYS+ KGY+ L G++
Sbjct: 133 QKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLSFRSNRCVFIGYSSSHKGYQCLHSSGRV 192
Query: 362 LFTRHIVFNENEFPFLSKGGDTEVVSR 442
+ H++F+E FP++S G D +++
Sbjct: 193 YVSNHVIFDEQSFPYVS-GSDFSSIAQ 218
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 157 bits (397), Expect = 1e-36
Identities = 73/136 (53%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN + ERKHRHI+EVGLSLLS + +P K+WD+AF + YL+NR+P++ IQ +P
Sbjct: 477 PHTHQQNGSAERKHRHIVEVGLSLLSHAHMPLKFWDEAFQAATYLINRVPSRVIQNTTPL 536
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
E KP Y LR FGC C+P LRPYNK KL RS+ FLG+SN KG+K L + G+
Sbjct: 537 EKFFHQKPDYSSLRVFGCACWPNLRPYNKHKLQFRSKRCAFLGFSNMHKGFKCLDISSGR 596
Query: 359 ILFTRHIVFNENEFPF 406
+ +R +VF+EN FPF
Sbjct: 597 VYISRDVVFDENIFPF 612
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 156 bits (394), Expect = 3e-36
Identities = 74/136 (54%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN + ERKH+HIIEVGLSLLS + +P K+WD+AF + YL+NRIP+KTIQ +P
Sbjct: 610 PHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPL 669
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
E L KP Y LR F C C+P L PYN KL RS+ VFLG+S KG+K L + G+
Sbjct: 670 EKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGR 729
Query: 359 ILFTRHIVFNENEFPF 406
+ +R +VF+EN FPF
Sbjct: 730 VYISRDVVFDENVFPF 745
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 156 bits (394), Expect = 3e-36
Identities = 74/136 (54%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN + ERKH+HIIEVGLSLLS + +P K+WD+AF + YL+NRIP+KTIQ +P
Sbjct: 610 PHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPL 669
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
E L KP Y LR F C C+P L PYN KL RS+ VFLG+S KG+K L + G+
Sbjct: 670 EKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGR 729
Query: 359 ILFTRHIVFNENEFPF 406
+ +R +VF+EN FPF
Sbjct: 730 VYISRDVVFDENVFPF 745
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 156 bits (394), Expect = 3e-36
Identities = 68/136 (50%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P P+QN ERKHRHI++ GL+LL+ + +P YW D+F+T+VY++NR+P++ + Y SPY
Sbjct: 551 PKHPEQNGLAERKHRHIVDTGLTLLAHAHMPSTYWVDSFNTAVYIINRLPSRVLNYASPY 610
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMP-KGK 358
E L P Y L+ FGC CFP+LRPYN KL LRS+ VFLGYS +GY+ P G+
Sbjct: 611 EQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSLNHQGYRCFDPSSGR 670
Query: 359 ILFTRHIVFNENEFPF 406
+ +RH++F+E+ FPF
Sbjct: 671 VYLSRHVLFDESSFPF 686
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 156 bits (394), Expect = 3e-36
Identities = 72/135 (53%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN VERKHRHI E+GL+LL+QS L +YW DAF TSV+L+NR+P K + +PY
Sbjct: 611 PHTSQQNGIVERKHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLINRLPTKVLDNLTPY 670
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGK 358
+LH +P Y+ LR FGC C+P LRPYN KL RS+ +FLGYSN KGY+ L + +
Sbjct: 671 FLLHKTEPTYMDLRVFGCACYPLLRPYNDHKLTFRSKKCIFLGYSNCQKGYRCLDLATKR 730
Query: 359 ILFTRHIVFNENEFP 403
+ +RH++F+E+ FP
Sbjct: 731 VYISRHVIFDEHSFP 745
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 155 bits (393), Expect = 4e-36
Identities = 74/136 (54%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
P+T QQN + ERKHRHI+EVGL+LL+ S +P K+W +AF ++VYL+NR P++ + SP
Sbjct: 605 PHTHQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPL 664
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLMPK-GK 358
E L GHKP Y LR FGC C+P LRPYNK KL RS FLGYS KG+K L P G+
Sbjct: 665 ERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGR 724
Query: 359 ILFTRHIVFNENEFPF 406
+ +R +VF+E +FPF
Sbjct: 725 VYISRDVVFDETQFPF 740
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 155 bits (392), Expect = 5e-36
Identities = 70/139 (50%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 PYTPQQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPY 181
PYTPQQN ERKHRH++E+GLS+L S P+K+W ++F T+ Y++NR+P+ ++ SPY
Sbjct: 607 PYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPY 666
Query: 182 EVLHGHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVLM-PKGK 358
E L G KP Y LR FG C+P LRP ++K D RS VFLGY++Q+KGY+ P GK
Sbjct: 667 EALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGK 726
Query: 359 ILFTRHIVFNENEFPFLSK 415
+ +R+++FNE+E PF K
Sbjct: 727 VYISRNVIFNESELPFKEK 745
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 155 bits (391), Expect = 7e-36
Identities = 73/132 (55%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Frame = +2
Query: 14 QQNETVERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLH 193
+QN + ERKHRHI+EVGLSLLS + +P K+WD+AF + YL+NRIP+KTIQ +P E L
Sbjct: 611 RQNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLF 670
Query: 194 GHKPAYLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSNQFKGYKVL-MPKGKILFT 370
KP Y LR FGC C+P LRPYN KL RS+ VFLG+S KG+K L + G++ +
Sbjct: 671 NQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYIS 730
Query: 371 RHIVFNENEFPF 406
R +VF+EN FPF
Sbjct: 731 RDVVFDENVFPF 742