BLASTX nr result
ID: Rehmannia24_contig00022455
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00022455
(1330 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 180 9e-48
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea] 164 2e-43
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 167 6e-42
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 155 8e-42
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 155 1e-41
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 153 7e-40
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 151 8e-40
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 151 8e-40
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 150 1e-39
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 158 2e-39
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623... 156 6e-39
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 142 3e-37
gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlise... 145 9e-37
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 134 2e-36
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 138 2e-35
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 138 2e-35
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 140 2e-35
ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629... 145 2e-35
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 145 1e-34
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 145 2e-34
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 180 bits (457), Expect(2) = 9e-48
Identities = 122/396 (30%), Positives = 183/396 (46%), Gaps = 5/396 (1%)
Frame = +2
Query: 158 VSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSVKSGYK 337
VSDLIH S W +L F +EV I+SIPLS R PD +WH+ K G+++VKS Y
Sbjct: 606 VSDLIHGDSREWNAPLLQNVFFPEEVMLIRSIPLSLRLTPDMLVWHYDKKGMFTVKSAYH 665
Query: 338 TAKLIKDCDNNVASS-SDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQRRRVL 514
A+ + +SS SD+ R W LW VP ++ F W+ I+GILP+K NL R++V
Sbjct: 666 VARSLHSSTGRASSSNSDAVARNWSLLWKAIVPARVKTFWWRVISGILPTKANLARKKVS 725
Query: 515 LDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNG--NLVEWIHHFMEKG 688
LD C+ C V++L ++DCPW +NG + +W+ E+
Sbjct: 726 LDEECMLCEGPVKSLIHILRDCPW------------------NNGAHSPKDWVCRCAEQL 767
Query: 689 DKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTAVE--GRKMKQSK 862
+ F M+ W ARN + NK + + RL + L G + +Q
Sbjct: 768 SSQDFATFLMVGWAIWEARNGLLWNNKKSRHEQVSLHASLRLHDFLRVSNCLGSQSRQG- 826
Query: 863 QQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVVIAE 1042
Q ++W +KIN+D R+ G V +T E
Sbjct: 827 QIKQMWQPPHENSLKINVDGAWKPGTTEGGVGVVVRDSTGKFVAGCATKLTNVFSAPQVE 886
Query: 1043 ALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFESFI 1222
ALA + LA G V+ E+D I LR++ +D S +G ++ED K + +
Sbjct: 887 ALAARTNTILAMERGYQNVVFESDALQIVTALRNHSIDRSVIGPVVEDTKSLLTQITGEG 946
Query: 1223 PSCVRRSGNLVAHHLVRFAFSLDGNNLKFEFIPEHV 1330
+ +RR+ N VAH L RFA + G+ FE P+ +
Sbjct: 947 FTHIRRTANGVAHRLARFALHIGGSLYWFEEPPDFI 982
Score = 38.5 bits (88), Expect(2) = 9e-48
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 27 IIFKGIRWNIGMGNQVRVWHDPWLAESPNF*VFRVR 134
+I +G RW +G G+ + +W D WL + +F +F R
Sbjct: 562 VIIQGSRWQVGSGDTIGIWEDRWLPQPNSFQIFSPR 597
>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
Length = 1255
Score = 164 bits (416), Expect(2) = 2e-43
Identities = 118/399 (29%), Positives = 170/399 (42%), Gaps = 3/399 (0%)
Frame = +2
Query: 143 PSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSV 322
P + VSDLI+ + W ++ F + I SIPL + PD+ IWH SKDG YSV
Sbjct: 851 PPTLRVSDLINPGTRDWNRSLIRHLFLPIDASSILSIPLGTGRHPDRLIWHFSKDGAYSV 910
Query: 323 KSGYKTAKLIKDCD-NNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQ 499
KSGYK A + A SSD+ WK LW + +PPKIL+F W+ ILP+K L+
Sbjct: 911 KSGYKRAWSTEHLRCPGPAHSSDTFSAFWKQLWRIALPPKILLFAWRLCRNILPTKALLR 970
Query: 500 RRRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFM 679
RR V D C C E A+ PWA W+ + L + L+ W+HH
Sbjct: 971 RRNVCRDSQCEVCDQEEENWHHAIATYPWAKLVWSNIHLPWALLSASLSDPLI-WVHHCF 1029
Query: 680 EKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTAV--EGRKMK 853
+ W RN + DV + L TA E + +
Sbjct: 1030 RALTASDFRKMLIGCWAIWSKRNEVRLFARSPDVMSTVAFINTYLATSTTAFDPEPQPLP 1089
Query: 854 QSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVV 1033
S W +G K+N+D+ R+ G V +K +
Sbjct: 1090 HSPTVTRRWEAPAHGTFKVNVDS--GRAGNHTVCAGIIRDDRGKCVGWFSKTSFPPLDPE 1147
Query: 1034 IAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFE 1213
E LA K LE A+ +GL V LE+D T+ + + +N + + L N++ DI + + F+
Sbjct: 1148 HGEYLAAKSGLEFARFLGLQAVTLESDCLTLVSAVNENVMHNASLFNILNDITALLATFD 1207
Query: 1214 SFIPSCVRRSGNLVAHHLVRFAFSLDGNNLKFEFIPEHV 1330
++ VRR N AH L + L G +P V
Sbjct: 1208 TYHVIFVRRQANNAAHLLGKVVSPLTGFGFDDSLLPSVV 1246
Score = 39.7 bits (91), Expect(2) = 2e-43
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWL 98
RS+L E++ G+RW G G+Q+ +W PWL
Sbjct: 804 RSLLTARELLVSGLRWCPGDGSQINIWSSPWL 835
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 167 bits (423), Expect(2) = 6e-42
Identities = 109/382 (28%), Positives = 183/382 (47%), Gaps = 3/382 (0%)
Frame = +2
Query: 143 PSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSV 322
PS+ +VS+LI+ + W E+++K F + + I IPL R R D+ IWH K G Y+V
Sbjct: 725 PSEALVSELINGEN-CWDEELIYKHFDKMDADVITQIPLPRRLREDELIWHFGKSGQYTV 783
Query: 323 KSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQR 502
KSGY+ A I+ + SSS+S K W +WSL +P KI +F W+A +LPS NL +
Sbjct: 784 KSGYQRALKIRF--PAMPSSSESSKNEWNIIWSLALPKKIRIFVWRAAKNLLPSAENLWK 841
Query: 503 RRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFME 682
R+++ +P C C+ +E + A+ DC A W +S + + Q +++ +H
Sbjct: 842 RKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDI-QAAPGQDILSLLHGVKR 900
Query: 683 KGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTAVEGRKMKQSK 862
+LFA++LW +ARN F+ K + Q + ++ + + K
Sbjct: 901 MRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQPSADVSHGK 960
Query: 863 QQAEV---WTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVV 1033
QQ W + G +KIN DA R+ G + K V
Sbjct: 961 QQKVAQLGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIKVSKFHGSVA 1020
Query: 1034 IAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFE 1213
AEA A + L++A+ + VI+E+D+ + + + + + S + ++ +I+ + F+
Sbjct: 1021 YAEAEAMEWGLQVAKDAHVKDVIMESDSQEVVSLVNNRQGSRSEIYWVVLEIQKLKESFD 1080
Query: 1214 SFIPSCVRRSGNLVAHHLVRFA 1279
RS N +AH LV+ A
Sbjct: 1081 HVSCVYTHRSCNAIAHSLVKIA 1102
Score = 32.0 bits (71), Expect(2) = 6e-42
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RSIL G +II G RW IG G V + W+ + F
Sbjct: 679 RSILWGRQIICGGSRWRIGNGQDVHIHKANWIPKPFTF 716
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 155 bits (392), Expect(2) = 8e-42
Identities = 105/384 (27%), Positives = 181/384 (47%), Gaps = 5/384 (1%)
Frame = +2
Query: 143 PSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSV 322
P + +V+DLI + W+++ L + F +++++ I I L S D+ +WH K G YSV
Sbjct: 1049 PHETVVADLIDSENK-WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSV 1107
Query: 323 KSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQR 502
KSGY+ A + N SS+S R+WK W L +P K+ +F W+A+ ILP+ NL +
Sbjct: 1108 KSGYQLA--LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWK 1165
Query: 503 RRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFME 682
RR L +P+C RC+ VET+ + +C A W ++P+ V+ ++ N + I
Sbjct: 1166 RRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQ-PSKDHNQDFFSAIQEMWS 1224
Query: 683 KGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTA-----VEGRK 847
+ L + W+ ARN F+ K D ++ + L+ + V G K
Sbjct: 1225 RSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAK 1284
Query: 848 MKQSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHE 1027
+ QQ W +K+N+DA R+ EG + K
Sbjct: 1285 DRGIDQQK--WKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRER 1342
Query: 1028 VVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASL 1207
V +AEA A L++A + + +I+E+D + L + + + + ++ D++ +
Sbjct: 1343 VSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKE 1402
Query: 1208 FESFIPSCVRRSGNLVAHHLVRFA 1279
F+ S + R+ N AH L +FA
Sbjct: 1403 FKQVQFSFIPRTCNTYAHALAKFA 1426
Score = 43.5 bits (101), Expect(2) = 8e-42
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF*VFRVRMVGHQT 152
RSIL G ++I KG+RW IG G +V V+ D W+ F + + H+T
Sbjct: 1003 RSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHET 1052
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 155 bits (391), Expect(2) = 1e-41
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 5/384 (1%)
Frame = +2
Query: 143 PSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSV 322
P + +V+DLI + W+++ L + F +++++ I I L S D+ +WH K G YSV
Sbjct: 362 PHETVVADLIDSENK-WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSV 420
Query: 323 KSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQR 502
KSGY+ A + N SS+S R+WK W L +P K+ +F W+A+ ILP+ NL +
Sbjct: 421 KSGYQLA--LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWK 478
Query: 503 RRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFME 682
RR L +P+C RC+ VET+ + +C A W ++P+ V+ ++ N + I
Sbjct: 479 RRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQ-PSKDHNQDFFSAIQEMWS 537
Query: 683 KGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTA-----VEGRK 847
+ L + W+ ARN F+ K D ++ + L+ + V G K
Sbjct: 538 RSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAK 597
Query: 848 MKQSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHE 1027
+ QQ W +K+N+DA R+ EG + K
Sbjct: 598 DRGIDQQK--WKPPSQNVLKLNVDAAVSTKXQKVGLGAIVRDAEGKILAVGIKQAQFRER 655
Query: 1028 VVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASL 1207
V +AEA A L++A + + +I+E+D + L + + + + ++ D++ +
Sbjct: 656 VSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKD 715
Query: 1208 FESFIPSCVRRSGNLVAHHLVRFA 1279
F+ S + R+ N AH L +FA
Sbjct: 716 FKQVQFSFIPRTCNTYAHALAKFA 739
Score = 43.5 bits (101), Expect(2) = 1e-41
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF*VFRVRMVGHQT 152
RSIL G ++I KG+RW IG G +V V+ D W+ F + + H+T
Sbjct: 316 RSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHET 365
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 153 bits (386), Expect(2) = 7e-40
Identities = 105/401 (26%), Positives = 190/401 (47%), Gaps = 5/401 (1%)
Frame = +2
Query: 143 PSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSV 322
P D V +L+ + + W + L++ F +++ + I IPL + D+ +WH+ K G YSV
Sbjct: 932 PIDTTVGELMDDENN-WNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMWHYDKHGEYSV 990
Query: 323 KSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQR 502
KSGY+ A +K D S+S S + WK +WS+++P K+ +F W+A +LP+ NL +
Sbjct: 991 KSGYQIALKLKAPDE--PSNSGSNSKRWKAVWSMELPEKMKIFMWRAARNLLPTAENLWK 1048
Query: 503 RRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFME 682
R+ L DP+C C VET+ A+ DC A W + V++ + N +++E+I+
Sbjct: 1049 RKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQISNAQ-NQDILEFIYEVWS 1107
Query: 683 KGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTAVEG-----RK 847
K W ARN + F+ K D + + L+ + A +
Sbjct: 1108 TWGKTKAEQTIAFCWAIWFARNKRIFEGKKSDPRASAAKAESLLEAYHRARKPDASHIHN 1167
Query: 848 MKQSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHE 1027
+K+ Q+ W +K+N+DA ++ G V + K +
Sbjct: 1168 VKRIVQKK--WEPPPGNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIVAAGTKQVPLREG 1225
Query: 1028 VVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASL 1207
V AEA A + L++A+ + L+ +I+ETD + + L + + + + +I DI+
Sbjct: 1226 VSFAEAEAMEWGLQIARELSLSALIMETDCKEVVDLLNNTKGSRTGISWVISDIQEQRRD 1285
Query: 1208 FESFIPSCVRRSGNLVAHHLVRFAFSLDGNNLKFEFIPEHV 1330
F+ + R+ N AH L + A + + + + IP+ +
Sbjct: 1286 FKEVKFRHIPRTCNTCAHSLAKLAVGANTSAVWLDHIPDEI 1326
Score = 39.3 bits (90), Expect(2) = 7e-40
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RSIL G ++I KG RW IG G+ + V+ D W+ F
Sbjct: 886 RSILWGRQVIQKGARWRIGNGSNILVYKDNWIPRPDTF 923
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
[Citrus sinensis]
Length = 968
Score = 151 bits (382), Expect(2) = 8e-40
Identities = 114/418 (27%), Positives = 186/418 (44%), Gaps = 10/418 (2%)
Frame = +2
Query: 107 PQLLSVSSSNGWPSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKT 286
P+ S P D VS LI E W+ +++ + F +++ I IPL + PD+
Sbjct: 557 PETFKPISPPSLPLDTTVSVLIDEDQ-CWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQV 615
Query: 287 IWHHSKDGIYSVKSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAI 466
+WH+ K G YSVKSGY+ A +K N SSS W +W LQ+P K+ +F W+A
Sbjct: 616 LWHYDKKGNYSVKSGYQLALQMKF--PNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRAT 673
Query: 467 NGILPSKVNLQRRRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDN 646
N +LP+ NL +RR+L P C RCRS ET+ ++ DC + W ++ + +
Sbjct: 674 NDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCK 733
Query: 647 GNLVEWIHHFMEKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHL 826
+++ + ++ K L + W H+RN+ FQNK D Q + +Q +
Sbjct: 734 -DVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYK 792
Query: 827 TAVEGRKMKQSKQQA---EVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNS 997
+ S Q + W G K+N+DA RN EG
Sbjct: 793 RIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEG----- 847
Query: 998 LNKFITAE-------HEVVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVD 1156
KFITA V AEA A + LE+A+S G +I+ETD+ + + + +
Sbjct: 848 --KFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVSARKST 905
Query: 1157 YSYLGNLIEDIKVIASLFESFIPSCVRRSGNLVAHHLVRFAFSLDGNNLKFEFIPEHV 1330
+ + ++ +++ + R+ N AH L + A + + +P H+
Sbjct: 906 KAEIFWIVSEVQDTMKRLKHVKLQHSPRACNGFAHTLAKLALDYTDCVIWEDNLPTHL 963
Score = 40.8 bits (94), Expect(2) = 8e-40
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RSIL G E+I KG+RW IG G V+V+ WL F
Sbjct: 523 RSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETF 560
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
[Citrus sinensis]
Length = 765
Score = 151 bits (382), Expect(2) = 8e-40
Identities = 114/418 (27%), Positives = 186/418 (44%), Gaps = 10/418 (2%)
Frame = +2
Query: 107 PQLLSVSSSNGWPSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKT 286
P+ S P D VS LI E W+ +++ + F +++ I IPL + PD+
Sbjct: 354 PETFKPISPPSLPLDTTVSVLIDEDQ-CWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQV 412
Query: 287 IWHHSKDGIYSVKSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAI 466
+WH+ K G YSVKSGY+ A +K N SSS W +W LQ+P K+ +F W+A
Sbjct: 413 LWHYDKKGNYSVKSGYQLALQMKF--PNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRAT 470
Query: 467 NGILPSKVNLQRRRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDN 646
N +LP+ NL +RR+L P C RCRS ET+ ++ DC + W ++ + +
Sbjct: 471 NDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCK 530
Query: 647 GNLVEWIHHFMEKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHL 826
+++ + ++ K L + W H+RN+ FQNK D Q + +Q +
Sbjct: 531 -DVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYK 589
Query: 827 TAVEGRKMKQSKQQA---EVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNS 997
+ S Q + W G K+N+DA RN EG
Sbjct: 590 RIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEG----- 644
Query: 998 LNKFITAE-------HEVVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVD 1156
KFITA V AEA A + LE+A+S G +I+ETD+ + + + +
Sbjct: 645 --KFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVSARKST 702
Query: 1157 YSYLGNLIEDIKVIASLFESFIPSCVRRSGNLVAHHLVRFAFSLDGNNLKFEFIPEHV 1330
+ + ++ +++ + R+ N AH L + A + + +P H+
Sbjct: 703 KAEIFWIVSEVQDTMKRLKHVKLQHSPRACNGFAHTLAKLALDYTDCVIWEDNLPTHL 760
Score = 40.8 bits (94), Expect(2) = 8e-40
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RSIL G E+I KG+RW IG G V+V+ WL F
Sbjct: 320 RSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETF 357
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 150 bits (380), Expect(2) = 1e-39
Identities = 106/350 (30%), Positives = 161/350 (46%), Gaps = 10/350 (2%)
Frame = +2
Query: 107 PQLLSVSSSNGWPSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKT 286
P+ S P D VS LI E W+ +++ + F +++ I IPL + PD+
Sbjct: 354 PETFKPISPPSLPLDTTVSVLIDEDQ-CWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQV 412
Query: 287 IWHHSKDGIYSVKSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAI 466
+WH+ K G YSVKSGY+ A +K N SSS W +W LQ+P K+ +F W+A
Sbjct: 413 LWHYDKKGNYSVKSGYQLALQMKF--PNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRAT 470
Query: 467 NGILPSKVNLQRRRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDN 646
N +LP+ NL +RR+L P C RCRS ET+ ++ DC + W ++ + +
Sbjct: 471 NDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCK 530
Query: 647 GNLVEWIHHFMEKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHL 826
+++ + ++ K L + W H+RN+ FQNK D Q + +Q +
Sbjct: 531 -DVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYK 589
Query: 827 TAVEGRKMKQSKQQA---EVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNS 997
+ S Q + W G K+N+DA RN EG
Sbjct: 590 RIQMPQLQAFSNQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEG----- 644
Query: 998 LNKFITAE-------HEVVIAEALACKDALELAQSVGLNKVILETDNATI 1126
KFITA V AEA A + LE+A+S G +I+ETD+ +
Sbjct: 645 --KFITAAIKPSKWLDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEV 692
Score = 40.8 bits (94), Expect(2) = 1e-39
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RSIL G E+I KG+RW IG G V+V+ WL F
Sbjct: 320 RSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETF 357
>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
Length = 589
Score = 158 bits (400), Expect(2) = 2e-39
Identities = 116/387 (29%), Positives = 185/387 (47%), Gaps = 8/387 (2%)
Frame = +2
Query: 143 PSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSV 322
P++ VS+L+ + W M+++ F++++ + I++IPL + D IWH++K GIYSV
Sbjct: 187 PTESKVSELLDQNLQ-WNEIMINQNFAKEDAEIIRNIPLPRTPQEDMVIWHYNKKGIYSV 245
Query: 323 KSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQR 502
KSGY+ A IK ++ S+ + W+ +W L +P KI +F WKA +LP NL R
Sbjct: 246 KSGYQLALKIKFSESPAGSTGAPQG--WQHIWRLNLPEKIKIFVWKATKNLLPMAENLWR 303
Query: 503 RRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPI--RVRLDQQEDNGNLVEWIHHF 676
R+VL +P C C++ E + A+ +C A W + + V+ +ED ++ +
Sbjct: 304 RKVLKEPTCHLCKAGCEDVFHALMECRVARKIWKCTHLENEVKSVIRED---MLSVMIGA 360
Query: 677 MEKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCI---KTTTNRLQEHLTAVEGRK 847
M K + A + W+A HARN FQ K LD + KT Q
Sbjct: 361 MNNWAKSEVDYVATIWWVAWHARNKLLFQGKKLDPIGSVAKGKTVMEVYQAQQVKERESH 420
Query: 848 MKQSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHE 1027
K + ++WT +K+N+DA RNH G + + K + +
Sbjct: 421 RNTVKGKMQIWTPPPNNKVKVNVDAAVKEDRKSAGLGVVIRNHRGQVLAAAVKSMNFQGN 480
Query: 1028 VVIAEALACKDALELAQSVGLNKVILETD---NATIFNKLRDNRVDYSYLGNLIEDIKVI 1198
+ IAEA A K +E+A+ + L+ VI+ETD A + NK NR + + + DI
Sbjct: 481 IAIAEAHAVKWGMEVAKDLSLSSVIIETDCKNVADLANKKVSNRTEILW---TMSDIHKS 537
Query: 1199 ASLFESFIPSCVRRSGNLVAHHLVRFA 1279
F+ V R N AH L + A
Sbjct: 538 TQDFQLISFQHVPRKCNDFAHFLAKRA 564
Score = 32.7 bits (73), Expect(2) = 2e-39
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RSI+ G ++ K IRW IG G ++++ W+ + F
Sbjct: 141 RSIVWGRHVLQKWIRWRIGNGEKIQIHSSNWIPKPSTF 178
>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
Length = 441
Score = 156 bits (395), Expect(2) = 6e-39
Identities = 109/384 (28%), Positives = 176/384 (45%), Gaps = 3/384 (0%)
Frame = +2
Query: 155 IVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSVKSGY 334
+V+DLI E WK EM+++ F +++ I I L + +PD+ +WH+ K G YSVKSGY
Sbjct: 42 VVADLIDENQN-WKKEMIYQHFMKEDAAMIVRIQLPNTPKPDQYLWHYDKYGQYSVKSGY 100
Query: 335 KTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQRRRVL 514
+ A +K C N+ SS DS W +W+ ++P KI +F W+A+ +LP+ NL RR+++
Sbjct: 101 QIALKLK-CPNSPCSS-DSSLSQWNVIWAAELPEKIKIFMWRAVKNLLPTTSNLWRRKIV 158
Query: 515 LDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFMEKGDK 694
P+C RC E + A+ DC A W + +++ + + +KG K
Sbjct: 159 GSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQDLMAVLVEIQRKKGKK 218
Query: 695 EGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTAVEGRKM---KQSKQ 865
E L +L W ++RN+ F+NK D Q I L + KQ +
Sbjct: 219 E-LELIVVLCWTIWYSRNLFIFENKREDSQLSIARAEANLDSFRRIKKPSSKILEKQQRN 277
Query: 866 QAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVVIAEA 1045
+ +VW G KIN+DA RN G V + + + EA
Sbjct: 278 RKQVWNPPPCGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEA 337
Query: 1046 LACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFESFIP 1225
A ++ AQ G + +I+ETD+ + + +V + +I DI+ F
Sbjct: 338 EAVILGIKSAQRAGFSPMIIETDSQEVVDLTLSKKVSITETSWIIADIQESIQSSNQFSI 397
Query: 1226 SCVRRSGNLVAHHLVRFAFSLDGN 1297
R N+ AH L + A + +
Sbjct: 398 QYTPRECNVTAHDLAKKALEFENS 421
Score = 32.7 bits (73), Expect(2) = 6e-39
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 36 KGIRWNIGMGNQVRVWHDPWL 98
KG+RW IG GNQV ++ WL
Sbjct: 3 KGLRWKIGSGNQVCIYKSNWL 23
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 142 bits (359), Expect(2) = 3e-37
Identities = 114/393 (29%), Positives = 177/393 (45%), Gaps = 15/393 (3%)
Frame = +2
Query: 158 VSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSVKSGYK 337
V +LI E + W +L + F+ E + I IPLS D+ +WH G Y+VKSGY
Sbjct: 719 VCELIEEGTGGWNEWLLEELFTPMESEIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGYF 778
Query: 338 TAKLIKDCDNNVASSSDSR---KRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQRRR 508
+L+ D N AS SDS R+W LW QVPPK+ + W+ + G LPS+ L +++
Sbjct: 779 VGRLL-DGLNRKASGSDSDVQWSRLWCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQ 837
Query: 509 VLLDPV-CVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFMEK 685
V L V CV C + VE ++C FW +++ + + ++ W +E
Sbjct: 838 VQLPDVNCVFCSTNVEDSLHLFKNCEALQPFWQQGMVQIH-PRTHPSISVEVWFWDMVEM 896
Query: 686 GDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQE----HLTAVEGRKMK 853
E F M LW+ RN ++ + ++ + +++ L E H +V RK
Sbjct: 897 LSGEKLEGFLMALWVIWVERNNMVWRGQFYNITNMMDWSSSLLLEYKHCHQRSVGTRKKN 956
Query: 854 QSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVV 1033
+SK WT G +++NID R+H+G V SL + +
Sbjct: 957 KSK-----WTCPPSGRLRVNIDGSFAHEEGRGGVGVVIRDHKGACVASLARPFPNAASAI 1011
Query: 1034 IAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFE 1213
E A + L + G V +E+D + ++ + D+S +G +IED + S F
Sbjct: 1012 HMEVEALRAGLLVCVQQGWRDVEVESDCMNLVQAMQTDGEDFSMVGRIIEDCQRYVSAFN 1071
Query: 1214 SFIPSCVRRSGNLVAHHLVRFA-------FSLD 1291
F V R N VA+ L FA FSLD
Sbjct: 1072 FFQLQHVCREANSVANRLAHFARCNSYDDFSLD 1104
Score = 40.8 bits (94), Expect(2) = 3e-37
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF*VFRVRMVGHQ 149
RS++ G E++ +G+R+ +G G + +W DPWL F F + M G +
Sbjct: 667 RSLMRGKELLQQGLRFQVGNGENIHLWDDPWLPLPYTFKPFSLPMHGSE 715
>gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlisea aurea]
Length = 1651
Score = 145 bits (366), Expect(2) = 9e-37
Identities = 113/386 (29%), Positives = 174/386 (45%), Gaps = 12/386 (3%)
Frame = +2
Query: 152 IIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSVKSG 331
I+V D I W L + FS +VK I SIPL+ PD+ IWH+++ G YSVK+G
Sbjct: 1270 ILVKDFILSNHSGWNHTRLRQIFSPLDVKHILSIPLAKNSCPDRLIWHYTRHGEYSVKTG 1329
Query: 332 YKTAKLIKDCDNNVASSSDSRKR----MWKWLWSLQVPPKILVFTWKAINGILPSKVNLQ 499
Y+ L+K ++ + SS MW+ LW LQ+P +IL F W+ ILP K NL
Sbjct: 1330 YQ---LLKGREDMLRPSSSQVNHDCILMWRALWKLQLPTRILTFGWRFAKNILPLKENLV 1386
Query: 500 RRRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFM 679
RRRV DP C C E+ A CP++ W + I + +E V+W+
Sbjct: 1387 RRRVGTDPTCPVCEMDRESWYHAFLTCPFSQAVWRLGGIPMDSVGREPLFP-VDWLIARF 1445
Query: 680 EKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLD-------VQWCIKTTTNRLQEHLTAVE 838
++ E + + LW R LD +++ + ++ + E L
Sbjct: 1446 QQLRAEQFSGLLVTLWCIWRHRMDHRHNQVTLDPLRTHHLIRYYVDSSGSAFSEQLDPPL 1505
Query: 839 GRKMKQSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITA 1018
+ Q + W G +K+N D+ R+ +G + +
Sbjct: 1506 LPPLLQQR-----WECPPVGFVKLNFDS-GRCTPSSTGLGGLIRDDQGRCQAWFSYQLDT 1559
Query: 1019 EHEVVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVD-YSYLGNLIEDIKV 1195
E + EALA + LELA ++G +VI+E D T+ L D V ++ LGN+++D
Sbjct: 1560 ELDPEAGEALAARKILELALAMGFTRVIVEGDCLTVLQALADQAVTLFASLGNVLQDSLR 1619
Query: 1196 IASLFESFIPSCVRRSGNLVAHHLVR 1273
+ FE+ S RR N AHHL +
Sbjct: 1620 LMEQFEACRLSHTRRQFNAAAHHLAK 1645
Score = 36.6 bits (83), Expect(2) = 9e-37
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF*VFR 128
R I E++ G+RW IG G V W DPW+ PN F+
Sbjct: 1220 RGIHSSREVLLGGLRWRIGNGLSVDAWKDPWI---PNTFAFK 1258
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 134 bits (337), Expect(2) = 2e-36
Identities = 114/429 (26%), Positives = 179/429 (41%), Gaps = 17/429 (3%)
Frame = +2
Query: 89 PLVSGVPQLLSVSSSNGWPSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSR 268
P V G+P + G P + VSDL+H W +E L+ +F++ E + I SI + +
Sbjct: 1225 PWVPGLPSFRPILRQ-GAPLFLRVSDLLHNNGG-WNMEALNYWFTDDECEAISSITVGAT 1282
Query: 269 YRPDKTIWHHSKDGIYSVKSGYKTAKLIKDCDNNVASSSD---SRKRMWKWLWSLQVPPK 439
RPD +W++ K+G Y+VKSGY A C+ N + + + + WK LW L++PPK
Sbjct: 1283 RRPDVYMWNYCKNGRYTVKSGYWLA-----CEENREEAINIVLAPRNFWKHLWKLKLPPK 1337
Query: 440 ILVFTWKAINGILPSKVNLQRRRVLLDPVCVRCRS*VETLEQAVQDCPW-------AGFF 598
I F W+ G +P L + + C RC+ E+ A C AGF+
Sbjct: 1338 INHFLWRCSMGFIPCMEVLLWKHIAHSASCFRCQQGRESPVHATWGCSCCVAVFERAGFY 1397
Query: 599 WTISPIRVRLDQQEDNGNLVEWIHHFMEKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLD 778
+S + + +HH DKE LFA+LLW+ H RN + +
Sbjct: 1398 SKLS--------SGQFPSFIHLLHHAFSTLDKEELQLFAVLLWLNWHERNNCYHKGAVVP 1449
Query: 779 VQWCIKTTTNRLQEHLTAVEGRKMKQSKQQAEV-------WTKSEYG*IKINIDAXXXXX 937
+ L+ A+ R + K EV W G +K+N D
Sbjct: 1450 SDIIYENGVKFLKCFKEALGCRAGVEVKAVEEVVPGSLRRWQAPSSGQLKVNCDGAANFK 1509
Query: 938 XXXXXXXNFFRNHEGIKVNSLNKFITAEHEVVIAEALACKDALELAQSVGLNKVILETDN 1117
R+ G + + K ++AE LA K L+L L +++E+D
Sbjct: 1510 DRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGLDLVVERRLRNIMVESDC 1569
Query: 1118 ATIFNKLRDNRVDYSYLGNLIEDIKVIASLFESFIPSCVRRSGNLVAHHLVRFAFSLDGN 1297
+ L + G L+EDI+ +L VRR GN AH + +F +G
Sbjct: 1570 LEAIHLLNSKERCLAPEGGLVEDIQNTMALVNISSIYHVRREGNTAAHAIAKFVARNNGR 1629
Query: 1298 NLKFEFIPE 1324
+ E P+
Sbjct: 1630 YVWLEDGPD 1638
Score = 46.6 bits (109), Expect(2) = 2e-36
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RS L G E++ KG+RW IG G +VRV+ DPW+ P+F
Sbjct: 1196 RSFLWGRELLRKGVRWRIGDGKEVRVFIDPWVPGLPSF 1233
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 138 bits (348), Expect(2) = 2e-35
Identities = 114/404 (28%), Positives = 181/404 (44%), Gaps = 13/404 (3%)
Frame = +2
Query: 107 PQLLSVSSSNGWPSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKT 286
PQL++ S +P+D VS L++E + W +++ F K I IP+S D
Sbjct: 960 PQLVTTLSP--FPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFA 1017
Query: 287 IWHHSKDGIYSVKSGYKTAK---LIKDCDNN---VASSSDSRKRMWKWLWSLQVPPKILV 448
W H K G+YSV+S Y A+ D N+ +AS ++ WK LW + P K+ +
Sbjct: 1018 SWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKI 1077
Query: 449 FTWKAINGILPSKVNLQRRRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFW--TISPIRV 622
W+A + L + L+RR + CV C +T+E CP+A W V
Sbjct: 1078 TLWRAAHECLATGFQLRRRHIPSTDGCVFCNR-DDTVEHVFLFCPFAAQIWEEIKGKCAV 1136
Query: 623 RLDQQEDNG--NLVEWIHHFMEKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWC-- 790
+L + NG + +WI F+++G + L A+ W ARN N + Q
Sbjct: 1137 KLGR---NGFSTMRQWIFDFLKRGSSHANTLLAVTFWHIWEARNNTKNNNGTVHPQRVVI 1193
Query: 791 -IKTTTNRLQEHLTAVEGRKMKQSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFF 967
I + + + +H T + + Q W IN DA
Sbjct: 1194 KILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSDAAIFSSSRTMGVGALI 1253
Query: 968 RNHEGIKVNSLNKFITAEHEVVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDN 1147
R++ G + + ++ I+ +AEALA + AL LA+ GL +++ +D T+ +++ +
Sbjct: 1254 RDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDCLTVIRRIQTS 1313
Query: 1148 RVDYSYLGNLIEDIKVIASLFESFIPSCVRRSGNLVAHHLVRFA 1279
D S +G +IEDIK +AS F V R NL AH L R A
Sbjct: 1314 GRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNA 1357
Score = 39.3 bits (90), Expect(2) = 2e-35
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWL 98
RS+L G E++ KG+RW +G G ++++ D W+
Sbjct: 924 RSLLFGRELLAKGVRWGVGDGKTIKIFSDNWI 955
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 138 bits (348), Expect(2) = 2e-35
Identities = 114/404 (28%), Positives = 181/404 (44%), Gaps = 13/404 (3%)
Frame = +2
Query: 107 PQLLSVSSSNGWPSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKT 286
PQL++ S +P+D VS L++E + W +++ F K I IP+S D
Sbjct: 917 PQLVTTLSP--FPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFA 974
Query: 287 IWHHSKDGIYSVKSGYKTAK---LIKDCDNN---VASSSDSRKRMWKWLWSLQVPPKILV 448
W H K G+YSV+S Y A+ D N+ +AS ++ WK LW + P K+ +
Sbjct: 975 SWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKI 1034
Query: 449 FTWKAINGILPSKVNLQRRRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFW--TISPIRV 622
W+A + L + L+RR + CV C +T+E CP+A W V
Sbjct: 1035 TLWRAAHECLATGFQLRRRHIPSTDGCVFCNR-DDTVEHVFLFCPFAAQIWEEIKGKCAV 1093
Query: 623 RLDQQEDNG--NLVEWIHHFMEKGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWC-- 790
+L + NG + +WI F+++G + L A+ W ARN N + Q
Sbjct: 1094 KLGR---NGFSTMRQWIFDFLKRGSSHANTLLAVTFWHIWEARNNTKNNNGTVHPQRVVI 1150
Query: 791 -IKTTTNRLQEHLTAVEGRKMKQSKQQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFF 967
I + + + +H T + + Q W IN DA
Sbjct: 1151 KILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSDAAIFSSSRTMGVGALI 1210
Query: 968 RNHEGIKVNSLNKFITAEHEVVIAEALACKDALELAQSVGLNKVILETDNATIFNKLRDN 1147
R++ G + + ++ I+ +AEALA + AL LA+ GL +++ +D T+ +++ +
Sbjct: 1211 RDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDCLTVIRRIQTS 1270
Query: 1148 RVDYSYLGNLIEDIKVIASLFESFIPSCVRRSGNLVAHHLVRFA 1279
D S +G +IEDIK +AS F V R NL AH L R A
Sbjct: 1271 GRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNA 1314
Score = 39.3 bits (90), Expect(2) = 2e-35
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWL 98
RS+L G E++ KG+RW +G G ++++ D W+
Sbjct: 881 RSLLFGRELLAKGVRWGVGDGKTIKIFSDNWI 912
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 140 bits (353), Expect(2) = 2e-35
Identities = 102/396 (25%), Positives = 168/396 (42%), Gaps = 2/396 (0%)
Frame = +2
Query: 149 DIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSVKS 328
D+ V DLI W +E + + F E+E + + SIPLS D W S++GI+SV+S
Sbjct: 961 DLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDDHRYWWPSRNGIFSVRS 1020
Query: 329 GYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQRRR 508
Y +L + +W+ +W LQ PPK+ F W+A G L K L R
Sbjct: 1021 CYWLGRL-GPVRTWQLQHGERETELWRRVWQLQGPPKLSHFLWRACKGSLAVKGRLFSRH 1079
Query: 509 VLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFMEKG 688
+ +D C C E++ A+ DC +A W +S L + E + +
Sbjct: 1080 ISVDATCSVCGDPDESINHALFDCTFARAIWQVSGF-ASLMMNAPLSSFSERLEWLAKHA 1138
Query: 689 DKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTAVEG--RKMKQSK 862
KE +W RN F+N+ D K + + ++ R
Sbjct: 1139 TKEEFRTMCSFMWAGWFCRNKLIFENELSDAPLVAKRFSKLVADYCEYAGSVFRGSGGGC 1198
Query: 863 QQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVVIAE 1042
+ +W+ G K+N DA N GIK+ + K + A V+AE
Sbjct: 1199 GSSALWSPPPTGMFKVNFDAHLSPNGEVGLGVVIRANDGGIKMLGV-KRVAARWTAVMAE 1257
Query: 1043 ALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFESFI 1222
A+A A+E+A +G +++LE D + N ++ + + + DI + + + F
Sbjct: 1258 AMAALFAVEVAHRLGFGRIVLEGDAMMVINAVKHKCEGVAPMFRIFNDISSLGACLDVFS 1317
Query: 1223 PSCVRRSGNLVAHHLVRFAFSLDGNNLKFEFIPEHV 1330
S VRR+GN VAH L R+ + + + P+ +
Sbjct: 1318 VSHVRRAGNTVAHLLARWCCDCNSEIVWLDSFPQSI 1353
Score = 37.0 bits (84), Expect(2) = 2e-35
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWL 98
RSI ++ +G++W +G G ++RVW D W+
Sbjct: 912 RSIWGSKSLLLEGLKWCVGSGERIRVWEDAWI 943
>ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629438 [Citrus sinensis]
Length = 715
Score = 145 bits (365), Expect(2) = 2e-35
Identities = 104/379 (27%), Positives = 169/379 (44%)
Frame = +2
Query: 143 PSDIIVSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSV 322
PS +VS+LI+ + W E++++ F + + I IPL R R D+ IWH K G Y+V
Sbjct: 336 PSKALVSELINGEN-CWDEELIYRHFDKMDADVITQIPLPRRSREDELIWHFGKSGQYTV 394
Query: 323 KSGYKTAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQR 502
KSGY+TA I+ + SSS+ K W +WSL +P KI +F W+A +LPS NL +
Sbjct: 395 KSGYQTALNIRF--PAMPSSSEFSKNEWNIIWSLALPKKIRIFVWRAAKNLLPSDENLWK 452
Query: 503 RRVLLDPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFME 682
R+++ +P C C+ +E + A+ DC A W +S + Q +++ +H
Sbjct: 453 RKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFDNDI-QAAPGQDILSLLHGVKR 511
Query: 683 KGDKEGHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRLQEHLTAVEGRKMKQSK 862
+LFA +LW +ARN QW K Q + E +
Sbjct: 512 MRSNADVDLFAAMLWAKWNARN-----------QWLFKGKRENPQSVVAKAEAVMEAYKR 560
Query: 863 QQAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVVIAE 1042
Q IN DA R+ G + K V AE
Sbjct: 561 VQPSA---------DINTDAATNSEKNLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAE 611
Query: 1043 ALACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFESFI 1222
A A + L++A+ + VI+E+D+ + + + + + S + ++ +I+ + F+
Sbjct: 612 AEAMEWGLQVAKDAHVKDVIMESDSQEVVSLVNNRQGSRSEIYWVVLEIQKLKESFDHVS 671
Query: 1223 PSCVRRSGNLVAHHLVRFA 1279
RS N +AH L + A
Sbjct: 672 CVYTHRSCNAIAHSLAKLA 690
Score = 32.3 bits (72), Expect(2) = 2e-35
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWLAESPNF 116
RSIL G +II G RW IG G V + W+ + F
Sbjct: 290 RSILWGRQIICAGSRWRIGNGQDVHIHKANWIPKPFTF 327
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 145 bits (367), Expect(2) = 1e-34
Identities = 106/384 (27%), Positives = 172/384 (44%), Gaps = 4/384 (1%)
Frame = +2
Query: 158 VSDLIHETSPIWKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSVKSGYK 337
VS L+ ++ W ++L+ F+E++ I IPLS+R D W H G+Y+V+S YK
Sbjct: 50 VSSLMVPSTRTWDSDILNDIFNERDKNLIWQIPLSNRSNADSWYWMHEAKGVYTVRSSYK 109
Query: 338 TAKLIKDCDNNVASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQRRRVLL 517
++ C + +SS +W LW L+VP K+ F W+A+ +LP+ NL ++ V +
Sbjct: 110 ---MLAPCLDIPSSS------IWNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEV 160
Query: 518 DPVCVRCRS*VETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFMEKGDKE 697
P C+ C + E++ + CP+A W S I D NL+ W+ + E
Sbjct: 161 PPACITCHASSESICHILLQCPFARTCWMTSSIGF----FGDGSNLLLWLEALFNRYSLE 216
Query: 698 GHNLFAMLLWMA*HARNMKNFQNKDLDVQWCIKTTTNRL-QEHLTAVEGRKMKQSK---Q 865
L M+ W RN ++ K VQ + + + L Q L + Q
Sbjct: 217 QTQLAVMICWSLWQNRNDMVWRGKTSGVQQLLNSAGHFLFQWQLVRKQQFLFSQPSPIGH 276
Query: 866 QAEVWTKSEYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVVIAEA 1045
A W G +K N+D N R+ + + I AEA
Sbjct: 277 GAICWEPPVAGRLKCNVDVALFAFRGYIGFGNVIRDSNCAFMAARCCSIPGRFSARDAEA 336
Query: 1046 LACKDALELAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFESFIP 1225
L ++AL + + L+ V +E D T++N L +N S +IED + +++
Sbjct: 337 LGVREALSWIKQLQLSNVTIEMDCLTVYNALVNNLSGPSSFSLIIEDCRALSNSIRDVSF 396
Query: 1226 SCVRRSGNLVAHHLVRFAFSLDGN 1297
S VRRS N VAH++ + SL G+
Sbjct: 397 SFVRRSANSVAHYVAQAGNSLSGH 420
Score = 28.9 bits (63), Expect(2) = 1e-34
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 24 EIIFKGIRWNIGMGNQVRVWHDPWLAES 107
+++ +G R IG G Q + DPWL +S
Sbjct: 5 QVVIEGSRIRIGDGEQTFIGKDPWLPDS 32
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 145 bits (365), Expect(2) = 2e-34
Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 7/387 (1%)
Frame = +2
Query: 191 WKLEMLHKFFSEQEVKWIKSIPLSSRYRPDKTIWHHSKDGIYSVKSGYKTAKLIKDCDNN 370
W +E+L+ F E I+ IP++ + +PD+ +W SK+G ++V+S Y +L++D
Sbjct: 981 WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYH-ELLEDRKTG 1039
Query: 371 VASSSDSRKRMWKWLWSLQVPPKILVFTWKAINGILPSKVNLQRRRVLLDPVCVRCRS*V 550
++S ++W+ +W ++PPK+ +F+WKAI+ L N+++R + +D C RC
Sbjct: 1040 PSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKE 1099
Query: 551 ETLEQAVQDCPWAGFFWTISPIRVRLDQQEDNGNLVEWIHHFME-KGDKEGHNLFAMLLW 727
ET E + C + W ISP+R+ E G+ W+ ++ D E LF M+ W
Sbjct: 1100 ETTEHLIWGCDESSRAWYISPLRIHTGNIE-AGSFRIWVESLLDTHKDTEWWALFWMICW 1158
Query: 728 MA*HARNMKNFQNKDLDVQWCIKTTTNRLQE------HLTAVEGRKMKQSKQQAEVWTKS 889
RN F+ K L Q ++ + E H + VE ++ W+
Sbjct: 1159 NIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENG-----WSVP 1213
Query: 890 EYG*IKINIDAXXXXXXXXXXXXNFFRNHEGIKVNSLNKFITAEHEVVIAEALACKDALE 1069
G +K+N+DA R+ EG + + A + +AEA + + L+
Sbjct: 1214 PVGMVKLNVDA-AVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLK 1272
Query: 1070 LAQSVGLNKVILETDNATIFNKLRDNRVDYSYLGNLIEDIKVIASLFESFIPSCVRRSGN 1249
+A G +++E D +F +LR D + G +++DI +AS + + V+R N
Sbjct: 1273 VAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKCSNVVFEHVKRHCN 1332
Query: 1250 LVAHHLVRFAFSLDGNNLKFEFIPEHV 1330
VAH L + + + E P V
Sbjct: 1333 KVAHLLAQMCKNAMEKRVWLEEYPSEV 1359
Score = 29.3 bits (64), Expect(2) = 2e-34
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 3 RSILVGWEIIFKGIRWNIGMGNQVRVWHDPWL 98
+SIL +I KG+ IG G +W DPW+
Sbjct: 918 KSILSARAVIQKGMCRVIGDGRDTTIWGDPWV 949