BLASTX nr result
ID: Rehmannia24_contig00022252
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia24_contig00022252 (613 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844... 63 7e-08 ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ... 59 1e-06 ref|XP_006393413.1| hypothetical protein EUTSA_v10012119mg [Eutr... 56 9e-06 >ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844438 [Brachypodium distachyon] Length = 2492 Score = 62.8 bits (151), Expect = 7e-08 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 3/107 (2%) Frame = -1 Query: 604 ICEVCGEDQETIEHMFFFCHRAIMVWKLAPVNWD---GLMEESKDFTSWWRRIICLPKSQ 434 +C +C + QE H+ C A VW + V W + S +WWR+II PKS Sbjct: 2025 LCLLCDQVQEGAAHLMIHCVFAKEVWHASSVKWPRVGAVAAASPSLRTWWRQIISGPKSA 2084 Query: 433 TLKDRIHVSTYILWWLWKTRNIWKFQRKLISEPELIASALFDWNEAE 293 + I ++ I W LWK RN FQ+K E+ A+AL+ E E Sbjct: 2085 SKDKEIAMAALIAWHLWKERNSRVFQQK-----EMNAAALYRMIEDE 2126 >ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana] gi|3184275|gb|AAC18922.1| putative reverse transcriptase [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase H domain-containing protein [Arabidopsis thaliana] Length = 365 Score = 58.9 bits (141), Expect = 1e-06 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Frame = -1 Query: 610 DPICEVCGEDQETIEHMFFFCHRAIMVWKLAPVNWDGLMEESKDFTSWWRRIICLPKSQT 431 DPIC+ C ++ETI H+ F C VW+ A + F R+I L K+QT Sbjct: 72 DPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQT 131 Query: 430 LK--DRIHVSTYILWWLWKTRNIWKFQRK 350 DR + +I+W LWK+RN++ FQ+K Sbjct: 132 TNSLDRF-LPFWIMWRLWKSRNVFLFQQK 159 >ref|XP_006393413.1| hypothetical protein EUTSA_v10012119mg [Eutrema salsugineum] gi|557089991|gb|ESQ30699.1| hypothetical protein EUTSA_v10012119mg [Eutrema salsugineum] Length = 238 Score = 55.8 bits (133), Expect = 9e-06 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 4/101 (3%) Frame = -1 Query: 610 DPICEVCGEDQETIEHMFFFCHRAIMVWKLAPVNW--DGLMEESKDFTSWWRRIICLPKS 437 D C +CGE QE + H+ F C + +WKLAP++ +E S + R++C P Sbjct: 2 DHNCHLCGEHQEMLNHILFQCRVSNEIWKLAPLHAPPGDTLEISTLIKNMNERLLCSPAK 61 Query: 436 QTLKDRIHVSTYILWWLWKTRN--IWKFQRKLISEPELIAS 320 Q + +++ W +WK RN I+K ++ I +P I S Sbjct: 62 QDAS----LISFVAWRIWKMRNMLIFKNKKDFIPQPPQIQS 98