BLASTX nr result

ID: Rehmannia24_contig00022252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00022252
         (613 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844...    63   7e-08
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    59   1e-06
ref|XP_006393413.1| hypothetical protein EUTSA_v10012119mg [Eutr...    56   9e-06

>ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844438 [Brachypodium
            distachyon]
          Length = 2492

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
 Frame = -1

Query: 604  ICEVCGEDQETIEHMFFFCHRAIMVWKLAPVNWD---GLMEESKDFTSWWRRIICLPKSQ 434
            +C +C + QE   H+   C  A  VW  + V W     +   S    +WWR+II  PKS 
Sbjct: 2025 LCLLCDQVQEGAAHLMIHCVFAKEVWHASSVKWPRVGAVAAASPSLRTWWRQIISGPKSA 2084

Query: 433  TLKDRIHVSTYILWWLWKTRNIWKFQRKLISEPELIASALFDWNEAE 293
            +    I ++  I W LWK RN   FQ+K     E+ A+AL+   E E
Sbjct: 2085 SKDKEIAMAALIAWHLWKERNSRVFQQK-----EMNAAALYRMIEDE 2126


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = -1

Query: 610 DPICEVCGEDQETIEHMFFFCHRAIMVWKLAPVNWDGLMEESKDFTSWWRRIICLPKSQT 431
           DPIC+ C  ++ETI H+ F C     VW+ A +           F     R+I L K+QT
Sbjct: 72  DPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQT 131

Query: 430 LK--DRIHVSTYILWWLWKTRNIWKFQRK 350
               DR  +  +I+W LWK+RN++ FQ+K
Sbjct: 132 TNSLDRF-LPFWIMWRLWKSRNVFLFQQK 159


>ref|XP_006393413.1| hypothetical protein EUTSA_v10012119mg [Eutrema salsugineum]
           gi|557089991|gb|ESQ30699.1| hypothetical protein
           EUTSA_v10012119mg [Eutrema salsugineum]
          Length = 238

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = -1

Query: 610 DPICEVCGEDQETIEHMFFFCHRAIMVWKLAPVNW--DGLMEESKDFTSWWRRIICLPKS 437
           D  C +CGE QE + H+ F C  +  +WKLAP++      +E S    +   R++C P  
Sbjct: 2   DHNCHLCGEHQEMLNHILFQCRVSNEIWKLAPLHAPPGDTLEISTLIKNMNERLLCSPAK 61

Query: 436 QTLKDRIHVSTYILWWLWKTRN--IWKFQRKLISEPELIAS 320
           Q       + +++ W +WK RN  I+K ++  I +P  I S
Sbjct: 62  QDAS----LISFVAWRIWKMRNMLIFKNKKDFIPQPPQIQS 98


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