BLASTX nr result
ID: Rehmannia24_contig00022157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00022157
(568 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig... 96 8e-18
emb|CBI19874.3| unnamed protein product [Vitis vinifera] 96 8e-18
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] 96 8e-18
gb|EOY07584.1| Transducin/WD40 repeat-like superfamily protein [... 88 2e-15
ref|XP_006442167.1| hypothetical protein CICLE_v10024300mg [Citr... 80 3e-13
ref|XP_006492801.1| PREDICTED: putative E3 ubiquitin-protein lig... 80 4e-13
ref|XP_006357361.1| PREDICTED: putative E3 ubiquitin-protein lig... 79 1e-12
ref|XP_006851973.1| hypothetical protein AMTR_s00041p00198410 [A... 79 1e-12
ref|XP_004237578.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 2e-12
ref|XP_004292946.1| PREDICTED: putative E3 ubiquitin-protein lig... 75 9e-12
sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-prote... 68 1e-09
dbj|BAH86605.1| U-box protein with unknown function [Lotus japon... 68 1e-09
gb|EXC00994.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus... 67 2e-09
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr... 66 5e-09
sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protei... 66 5e-09
ref|XP_004496090.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 1e-08
ref|XP_002307730.2| hypothetical protein POPTR_0005s26160g [Popu... 64 3e-08
gb|ACL14424.1| putative E3 ubiquitin ligase [Lotus japonicus] 64 3e-08
sp|D1FP57.1|LIN2_LOTJA RecName: Full=Putative E3 ubiquitin-prote... 64 3e-08
gb|ESW16191.1| hypothetical protein PHAVU_007G136300g [Phaseolus... 63 6e-08
>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1494
Score = 95.5 bits (236), Expect = 8e-18
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSV--- 168
+LRLLS+RAMDS +S S PV GE+ ++ R++ GH QS+
Sbjct: 423 VLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSD-GEVIELPRSCRKNHGHNQSISHQ 481
Query: 167 ---RLVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
R V SSLN ++G+ S S P S+ LTP+SRPPKDFVCPITGQIF+D VTLET
Sbjct: 482 NLNRQVSENSSLNENDEGSQSCISLPLSDKLTPRSRPPKDFVCPITGQIFSDAVTLET 539
>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
Length = 1510
Score = 95.5 bits (236), Expect = 8e-18
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSV--- 168
+LRLLS+RAMDS +S S PV GE+ ++ R++ GH QS+
Sbjct: 439 VLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSD-GEVIELPRSCRKNHGHNQSISHQ 497
Query: 167 ---RLVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
R V SSLN ++G+ S S P S+ LTP+SRPPKDFVCPITGQIF+D VTLET
Sbjct: 498 NLNRQVSENSSLNENDEGSQSCISLPLSDKLTPRSRPPKDFVCPITGQIFSDAVTLET 555
>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
Length = 1494
Score = 95.5 bits (236), Expect = 8e-18
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSV--- 168
+LRLLS+RAMDS +S S PV GE+ ++ R++ GH QS+
Sbjct: 423 VLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSD-GEVIELPRSCRKNHGHNQSISHQ 481
Query: 167 ---RLVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
R V SSLN ++G+ S S P S+ LTP+SRPPKDFVCPITGQIF+D VTLET
Sbjct: 482 NLNRQVSENSSLNENDEGSQSCISLPLSDKLTPRSRPPKDFVCPITGQIFSDAVTLET 539
>gb|EOY07584.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1500
Score = 87.8 bits (216), Expect = 2e-15
Identities = 55/118 (46%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSVRL- 162
+LRLLS R DS S P+ GE+ K+ R++ G A S+
Sbjct: 427 ILRLLSCRITDSSDPTSLPISPCKSNDHSISSGESD-GEVIEMQKSCRKNRGRAHSMSYD 485
Query: 161 -----VFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
SS N +GN S S P SE LTPQSRPPKDFVCPITGQIFNDPVTLET
Sbjct: 486 NVNIRTSEHSSQNESSEGNHSCVSLPLSEKLTPQSRPPKDFVCPITGQIFNDPVTLET 543
>ref|XP_006442167.1| hypothetical protein CICLE_v10024300mg [Citrus clementina]
gi|557544429|gb|ESR55407.1| hypothetical protein
CICLE_v10024300mg [Citrus clementina]
Length = 1441
Score = 80.5 bits (197), Expect = 3e-13
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSVR-- 165
+LRLLS+R S + S P DGE+ + K++ R+ A+S+
Sbjct: 408 LLRLLSSRISHSPVPTSSP-SSPQLSKDYSISSADSDGELVEKQKSSTRNSSRARSMSYE 466
Query: 164 ----LVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
++ S N ++G+ S S P SE +T +SRPPKDFVCPITGQIFNDPVTLET
Sbjct: 467 NVNIVLLENSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLET 524
>ref|XP_006492801.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Citrus
sinensis]
Length = 1496
Score = 80.1 bits (196), Expect = 4e-13
Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTR-----RSVGHAQ 174
+LRLLS+R S + S P DGE+ Q +TR RS+ +
Sbjct: 422 LLRLLSSRISHSPVPTSSP-SSPQLSKDYSISSADSDGELEKQKSSTRNSSRARSMSYEN 480
Query: 173 SVRLVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
++ S N ++G+ S S P SE +T +SRPPKDFVCPITGQIFNDPVTLET
Sbjct: 481 VNIVLLENSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLET 537
>ref|XP_006357361.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Solanum
tuberosum]
Length = 1490
Score = 78.6 bits (192), Expect = 1e-12
Identities = 53/119 (44%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSVRLV 159
+LRLLS R DS +SNS + E T Q +T + QS+
Sbjct: 419 VLRLLSGRVKDSSMSNSLHLSQELKINSADSDE-----ERTVQHETVGKRNDRRQSLSQS 473
Query: 158 FPK-------SSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
K SS N+ ++G+LS S P SE T SRPPKDFVCPITGQIFNDPVTLET
Sbjct: 474 LEKGISSNNDSSPNNSDEGSLSCISLPLSEKSTAPSRPPKDFVCPITGQIFNDPVTLET 532
>ref|XP_006851973.1| hypothetical protein AMTR_s00041p00198410 [Amborella trichopoda]
gi|548855556|gb|ERN13440.1| hypothetical protein
AMTR_s00041p00198410 [Amborella trichopoda]
Length = 647
Score = 78.6 bits (192), Expect = 1e-12
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQ--LKTTRRSVGHAQSV- 168
++R LSTR S +S+S P + + Q +++R+ + +S+
Sbjct: 135 IIRFLSTRLSSSALSSSLPASPTCNDSSISSNGSEVEDKTLFQEVQRSSRKDISSKRSLS 194
Query: 167 ----RLVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
+ P+S ED + S S PTSE LTP+ RPPKDFVCPITGQ+FNDPVTLET
Sbjct: 195 FGISKTQLPESGTESEEDISQSTTSIPTSEKLTPRKRPPKDFVCPITGQLFNDPVTLET 253
>ref|XP_004237578.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Solanum
lycopersicum]
Length = 1488
Score = 77.8 bits (190), Expect = 2e-12
Identities = 50/113 (44%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSVRLV 159
+LRLLS R +S +SNS + E G+ RRS+ + +
Sbjct: 419 VLRLLSGRVKNSSMSNSLHLSQEINSTDSDEERTVQH-ETVGKRNARRRSLSQSLEKGIS 477
Query: 158 FPK-SSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
SS N+ ++G+LS S P SE T SRPPKDFVCPITGQIFNDPVTLET
Sbjct: 478 SNNDSSPNNSDEGSLSCISLPLSEKSTAPSRPPKDFVCPITGQIFNDPVTLET 530
>ref|XP_004292946.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like
[Fragaria vesca subsp. vesca]
Length = 1476
Score = 75.5 bits (184), Expect = 9e-12
Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Frame = -3
Query: 335 LRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSVRLVF 156
LRLLS R DS ++ S P E+ K+ R+ S+
Sbjct: 404 LRLLSVRITDSAVATSLPASPGMSNDYSISSADTDV-EVIETTKSCRKVYSRTSSINNEL 462
Query: 155 PKSSLN----HGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
K S N ++G S S P+SE +T +SRPPKDFVCPITGQIF+DPVTLET
Sbjct: 463 VKMSKNSPPNENDEGGQSCVSLPSSERMTAKSRPPKDFVCPITGQIFSDPVTLET 517
>sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1; AltName:
Full=Protein cerberus
Length = 1485
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = -3
Query: 191 SVGHAQSVRLVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVT 12
S+ H L+ SSL +DG S+ S P E L+ S+PPKDFVCPITGQIF DPVT
Sbjct: 470 SMNHENENSLILNGSSLCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVT 529
Query: 11 LET 3
LET
Sbjct: 530 LET 532
>dbj|BAH86605.1| U-box protein with unknown function [Lotus japonicus]
gi|254749430|dbj|BAH86606.1| U-box protein with unknown
function [Lotus japonicus]
Length = 1477
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = -3
Query: 191 SVGHAQSVRLVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVT 12
S+ H L+ SSL +DG S+ S P E L+ S+PPKDFVCPITGQIF DPVT
Sbjct: 462 SMNHENENSLILNGSSLCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVT 521
Query: 11 LET 3
LET
Sbjct: 522 LET 524
>gb|EXC00994.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus notabilis]
Length = 1555
Score = 67.4 bits (163), Expect = 2e-09
Identities = 48/116 (41%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = -3
Query: 338 MLRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRRSVGHAQSVRLV 159
+LRL S R DS + S PV GE L++ R+ S V
Sbjct: 494 LLRLKSVRLTDSASATSLPVSPPMSNDYSTSSVDSD-GEAIEVLQSCSRNSSQKHSFESV 552
Query: 158 FPK----SSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
+ SS+N +G+ S S P SE T +SRP KDFVCPITGQIF DPVTLET
Sbjct: 553 NNRTCKNSSINEDYEGSQSCISFPLSEKPTSKSRPLKDFVCPITGQIFCDPVTLET 608
>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
gi|358346073|ref|XP_003637097.1| U-box domain-containing
protein [Medicago truncatula]
gi|355480708|gb|AES61911.1| U-box domain-containing
protein [Medicago truncatula]
gi|355503032|gb|AES84235.1| U-box domain-containing
protein [Medicago truncatula]
Length = 1490
Score = 66.2 bits (160), Expect = 5e-09
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = -3
Query: 164 LVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
LV SS EDG S +S P E LT S+PPKDFVCPITGQIF+DPVTLET
Sbjct: 483 LVLNDSSHCESEDGYQSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLET 536
>sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protein ligase LIN; Short=MtLIN
gi|219522090|gb|ACL14419.1| putative E3 ubiquitin ligase
[Medicago truncatula] gi|219522092|gb|ACL14420.1|
putative E3 ubiquitin ligase [Medicago truncatula]
Length = 1488
Score = 66.2 bits (160), Expect = 5e-09
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = -3
Query: 164 LVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
LV SS EDG S +S P E LT S+PPKDFVCPITGQIF+DPVTLET
Sbjct: 481 LVLNDSSHCESEDGYQSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLET 534
>ref|XP_004496090.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like isoform X1
[Cicer arietinum] gi|502118080|ref|XP_004496091.1|
PREDICTED: putative E3 ubiquitin-protein ligase LIN-like
isoform X2 [Cicer arietinum]
Length = 1486
Score = 65.1 bits (157), Expect = 1e-08
Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = -3
Query: 335 LRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXD--GEMTGQLKTTRRSVGHAQSVRL 162
LRLLS+R +S + +SQ + G+ + S+ L
Sbjct: 420 LRLLSSRFRNSTVCDSQSSSPDISSDHILNGDEEVMVLENIKGKNDSQTPSMNQDNESSL 479
Query: 161 VFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
V SS +DG S S P E LT S+PPKDFVCPITGQIF DPVTLET
Sbjct: 480 VLNDSSHCESDDGYQSSTSFPKLEKLTIGSKPPKDFVCPITGQIFCDPVTLET 532
>ref|XP_002307730.2| hypothetical protein POPTR_0005s26160g [Populus trichocarpa]
gi|550339769|gb|EEE94726.2| hypothetical protein
POPTR_0005s26160g [Populus trichocarpa]
Length = 1368
Score = 63.9 bits (154), Expect = 3e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 4/40 (10%)
Frame = -3
Query: 110 ASSPTSE----VLTPQSRPPKDFVCPITGQIFNDPVTLET 3
+SSP S+ +LTP+SRPPKDFVCPITGQ+FNDPVTLET
Sbjct: 363 SSSPDSDGEVIMLTPRSRPPKDFVCPITGQLFNDPVTLET 402
>gb|ACL14424.1| putative E3 ubiquitin ligase [Lotus japonicus]
Length = 1485
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -3
Query: 164 LVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
LV SS EDG S +S P E L+ S+PPKDFVCPITGQIF DPVTLET
Sbjct: 479 LVLNDSSHCESEDGYQSSSSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLET 532
>sp|D1FP57.1|LIN2_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-2;
Short=LjLIN gi|219522098|gb|ACL14423.1| putative E3
ubiquitin ligase [Lotus japonicus]
Length = 1485
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -3
Query: 164 LVFPKSSLNHGEDGNLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
LV SS EDG S +S P E L+ S+PPKDFVCPITGQIF DPVTLET
Sbjct: 479 LVLNDSSHCESEDGYQSSSSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLET 532
>gb|ESW16191.1| hypothetical protein PHAVU_007G136300g [Phaseolus vulgaris]
Length = 1491
Score = 62.8 bits (151), Expect = 6e-08
Identities = 46/114 (40%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = -3
Query: 335 LRLLSTRAMDSQISNSQPVXXXXXXXXXXXXXXXXDGEMTGQLKTTRR--SVGHAQSVRL 162
LRLLSTR DS S+S G + K + S+ + L
Sbjct: 424 LRLLSTRLRDSTTSDSLSSSLELSTDHILNSDKEIMGLKNIKRKNNNQTPSMNNDSGNSL 483
Query: 161 VFPKSSLNHGEDG-NLSYASSPTSEVLTPQSRPPKDFVCPITGQIFNDPVTLET 3
SSL +D N S+ + P E L S+PPKDFVCPITGQIF DPVTLET
Sbjct: 484 GLNDSSLCESDDEENQSFTTLPKLEKLAIGSKPPKDFVCPITGQIFCDPVTLET 537