BLASTX nr result

ID: Rehmannia24_contig00021933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00021933
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239116.1| PREDICTED: putative late blight resistance p...    59   5e-07
gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]                    59   9e-07
gb|AAC49408.1| PRF [Solanum lycopersicum]                              58   1e-06
gb|AAF76308.1| Prf [Solanum pimpinellifolium]                          58   1e-06
ref|XP_006348601.1| PREDICTED: putative late blight resistance p...    57   3e-06

>ref|XP_004239116.1| PREDICTED: putative late blight resistance protein homolog
            R1B-17-like [Solanum lycopersicum]
          Length = 1825

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372  IGLLYHLSYLDVEYLPTSISCLVNLQVLVVRS-GGR--ISEALLKMPKLKYVHFHSRVQF 202
            I + Y  +  D   +P+SI+ L NL+  VVR  GG   +  +LLKM KL+++H + RV F
Sbjct: 1522 IQMKYFAAQTDANSIPSSIAKLENLETFVVRGLGGEMILPCSLLKMVKLRHIHVNDRVSF 1581

Query: 201  SDSLHLLTTKNNKSLDKNKIQSVSFLRISHGRD-DAILKNFTGLRRLKCSFIASKGL--- 34
                ++     N  L  + +++ S  R+ +G+D + IL+    LR+L C F  + G    
Sbjct: 1582 GLHENMDVLTGNSQL--SNLETFSTPRLFYGKDAEKILRKMPKLRKLSCIFSGTFGYSRK 1639

Query: 33   -------YPVVDFLAQLE 1
                   +P +DFL+ LE
Sbjct: 1640 LKGRCVRFPRLDFLSHLE 1657


>gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]
          Length = 1825

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372  IGLLYHLSYLDVEYLPTSISCLVNLQVLVVRS-GGR--ISEALLKMPKLKYVHFHSRVQF 202
            I + Y  +  D   +P+SI+ L NL+  VVR  GG   +  +LLKM KL+++H + RV F
Sbjct: 1522 IQMKYFAAQTDANSIPSSIAKLENLETFVVRGLGGEMILPCSLLKMVKLRHIHVNDRVSF 1581

Query: 201  SDSLHLLTTKNNKSLDKNKIQSVSFLRISHGRD-DAILKNFTGLRRLKCSFIASKGL--- 34
                ++     N  L    +++ S  R+ +G+D + IL+    LR+L C F  + G    
Sbjct: 1582 GLRENMDVLTGNSQLP--NLETFSTPRLFYGKDAEKILRKMPKLRKLSCIFSGTFGYSRK 1639

Query: 33   -------YPVVDFLAQLE 1
                   +P +DFL+ LE
Sbjct: 1640 LKGRCVRFPRLDFLSHLE 1657


>gb|AAC49408.1| PRF [Solanum lycopersicum]
          Length = 1824

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372  IGLLYHLSYLDVEYLPTSISCLVNLQVLVVRS-GGR--ISEALLKMPKLKYVHFHSRVQF 202
            I + Y  +  D   +P+SI+ L NL+  VVR  GG   +  +LLKM KL+++H + RV F
Sbjct: 1521 IQMKYFAAQTDANSIPSSIAKLENLETFVVRGLGGEMILPCSLLKMVKLRHIHVNDRVSF 1580

Query: 201  SDSLHLLTTKNNKSLDKNKIQSVSFLRISHGRD-DAILKNFTGLRRLKCSFIASKGL--- 34
                ++     N  L    +++ S  R+ +G+D + +L+    LR+L C F  + G    
Sbjct: 1581 GLHENMDVLTGNSQLP--NLETFSTPRLFYGKDAEKVLRKMPKLRKLSCIFSGTFGYSRK 1638

Query: 33   -------YPVVDFLAQLE 1
                   +P +DFL+ LE
Sbjct: 1639 LKGRCVRFPRLDFLSHLE 1656


>gb|AAF76308.1| Prf [Solanum pimpinellifolium]
          Length = 1824

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372  IGLLYHLSYLDVEYLPTSISCLVNLQVLVVRS-GGR--ISEALLKMPKLKYVHFHSRVQF 202
            I + Y  +  D   +P+SI+ L NL+  VVR  GG   +  +LLKM KL+++H + RV F
Sbjct: 1521 IQMKYFAAQTDANSIPSSIAKLENLETFVVRGLGGEMILPCSLLKMVKLRHIHVNDRVSF 1580

Query: 201  SDSLHLLTTKNNKSLDKNKIQSVSFLRISHGRD-DAILKNFTGLRRLKCSFIASKGL--- 34
                ++     N  L    +++ S  R+ +G+D + +L+    LR+L C F  + G    
Sbjct: 1581 GLHENMDVLTGNSQLP--NLETFSTPRLFYGKDAEKVLRKMPKLRKLSCIFSGTFGYSRK 1638

Query: 33   -------YPVVDFLAQLE 1
                   +P +DFL+ LE
Sbjct: 1639 LKGRCVRFPRLDFLSHLE 1656


>ref|XP_006348601.1| PREDICTED: putative late blight resistance protein homolog
            R1B-16-like [Solanum tuberosum]
          Length = 1733

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 18/139 (12%)
 Frame = -3

Query: 363  LYHLSYL----DVEYLPTSISCLVNLQVLVVRS-GGRI--SEALLKMPKLKYVHFHSRVQ 205
            L HL YL    D   +P+ I+ L NL+  VVR  GG +    +LL+M KL+++    R  
Sbjct: 1431 LIHLRYLAVQTDANSIPSFIAKLQNLETFVVRGLGGEVILPRSLLRMVKLRHILVKRRAS 1490

Query: 204  FSDSLHLLTTKNNKSLDKNKIQSVSFLRISHGRD-DAILKNFTGLRRLKCSFIAS----- 43
            F  +LH    ++  +   N +++ S  R+S+G+D + IL     LR+L C F+ +     
Sbjct: 1491 F--TLHENMDESLANSQLNDLETFSTPRLSYGKDAETILAKMPNLRKLSCIFLETFSYSE 1548

Query: 42   --KG---LYPVVDFLAQLE 1
              KG   L+P ++FL+ LE
Sbjct: 1549 KLKGRCVLFPRLEFLSHLE 1567


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