BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00021819
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    61   2e-07
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    61   2e-07
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    59   7e-07
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    57   2e-06
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    57   2e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    57   3e-06
gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus pe...    57   3e-06
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    56   6e-06
ref|XP_004296277.1| PREDICTED: uncharacterized protein LOC101301...    55   1e-05
emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]    55   1e-05

>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 48/102 (47%)
 Frame = -3

Query: 309 PKGRSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRGLQWD 130
           P GRSGGL L+W   V +  I      I+       +  Y   V+ + + ++R +   W 
Sbjct: 216 PNGRSGGLALMWKNNVSLSLISQDERLIDSHVTFNNKSFYLSCVYGHPTQSERHQ--LWQ 273

Query: 129 FLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
            L          WLL GDFN+I SN EK GG +R  W+F  F
Sbjct: 274 TLEHISDNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNF 315


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1750

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 48/102 (47%)
 Frame = -3

Query: 309 PKGRSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRGLQWD 130
           P GRSGGL L+W   V +  I      I+       +  Y   V+ + + ++R +   W 
Sbjct: 442 PNGRSGGLALMWKNNVSLSLISQDERLIDSHVTFNNKSFYLSCVYGHPTQSERHQ--LWQ 499

Query: 129 FLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
            L          WLL GDFN+I SN EK GG +R  W+F  F
Sbjct: 500 TLEHISDNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNF 541


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/106 (34%), Positives = 54/106 (50%)
 Frame = -3

Query: 321 HCVEPKGRSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRG 142
           H VEP+GRSGGL + W   ++I  + A    ++++     +  +   V+    T+ R + 
Sbjct: 56  HTVEPEGRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPK- 114

Query: 141 LQWDFLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
             W+ L     K  ++W L GDFNDI SN EK GG  R   SF  F
Sbjct: 115 -LWEHLNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCF 159


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/102 (32%), Positives = 48/102 (47%)
 Frame = -3

Query: 309 PKGRSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRGLQWD 130
           P+G SGGL L+W + V++  +      I+V         Y   V+ +   ++R     W 
Sbjct: 442 PQGHSGGLALLWKDSVRLSNLYQDDRHIDVHISINNINFYLSRVYGHPCQSERHS--LWT 499

Query: 129 FLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
                 +   D W+L GDFN+I SN EK GG  R  W+F  F
Sbjct: 500 HFENLSKTRNDPWILIGDFNEILSNNEKIGGPQRDEWTFRGF 541


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/102 (32%), Positives = 48/102 (47%)
 Frame = -3

Query: 309 PKGRSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRGLQWD 130
           P+G SGGL L+W + V++  +      I+V         Y   V+ +   ++R     W 
Sbjct: 422 PQGHSGGLALLWKDSVRLSNLYQDDRHIDVHISINNINFYLSRVYGHPCQSERHS--LWT 479

Query: 129 FLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
                 +   D W+L GDFN+I SN EK GG  R  W+F  F
Sbjct: 480 HFENLSKTRNDPWILIGDFNEILSNNEKIGGPQRDEWTFRGF 521


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/106 (33%), Positives = 54/106 (50%)
 Frame = -3

Query: 321 HCVEPKGRSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRG 142
           H VEP G+SGGL L+W + V+I  + +    I+     + +KE+ +   +Y      +RG
Sbjct: 57  HTVEPIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQ-DKEF-YLTCIYGEPVQAERG 114

Query: 141 LQWDFLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
             W+ L +        W+LTGDFN++    EK GG  R   S  +F
Sbjct: 115 ELWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEF 160


>gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus persica]
          Length = 1171

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
 Frame = -3

Query: 318 CVEPKGRSGGLLLVWAEKVKIIQIIAYYFC-IEVEFCREGEKEYRWAVFVYASTNDRDRG 142
           C+   GR GG++L+W   +  I I+ Y+ C I  E       +     F+YA      + 
Sbjct: 149 CIPYVGRCGGIILMWNPAIFNISILNYHECYINCELQDITTNKSWTTTFIYAYPQKAKQS 208

Query: 141 LQWDFLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKFN 1
             W  ++  +      WL+ GDFN ICS  EK GG    + +   FN
Sbjct: 209 NLWREIVSLKPTNNHPWLMLGDFNSICSMNEKVGGSFETSQAMRNFN 255


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%)
 Frame = -3

Query: 315 VEPKGRSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRGLQ 136
           VEP G SGGL L ++    +  I      I++E   +G + +    FVY     + R L 
Sbjct: 59  VEPIGNSGGLALFYSRDYPVKFIYVCDRLIDIETIIDGNRVF--ITFVYGDPVVQYRELV 116

Query: 135 WDFLLQARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
           W  L +      + W + GDFN+I  N EK+GG+ R   SF  F
Sbjct: 117 WKRLTRIGIVRSEPWFMIGDFNEIIGNHEKRGGKKRSESSFLPF 160


>ref|XP_004296277.1| PREDICTED: uncharacterized protein LOC101301378 [Fragaria vesca
            subsp. vesca]
          Length = 1570

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/99 (31%), Positives = 50/99 (50%)
 Frame = -3

Query: 300  RSGGLLLVWAEKVKIIQIIAYYFCIEVEFCREGEKEYRWAVFVYASTNDRDRGLQWDFLL 121
            RSGGL L+W + +++      YF I+V+     + ++R+  F Y  ++   R   WD L 
Sbjct: 1010 RSGGLALLWDDSIRVSVRDVNYFFIDVDVIDLEDVQWRFTGF-YGHSDTGQRQHSWDLLR 1068

Query: 120  QARRKWGDSWLLTGDFNDICSNLEKKGGRLRPAWSFTKF 4
               R+  D W++  D N+I    EK GG++R     T F
Sbjct: 1069 SRCRRDRDRWVVAEDSNEILGLGEKSGGQIRDVDQITAF 1107


>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
 Frame = -3

Query: 324 WHCVEPKGRSGGLLLVWAEKVKIIQIIAY-YFCIEVEF--CREGEKEYRWAVF-VYASTN 157
           W  +  +G +GG+L+ W ++V  ++ +    F I   F  C +G   + W    VY  T 
Sbjct: 363 WGVMNARGAAGGVLVFWDKRVLELEGMEVGLFSISCRFKNCEDG---FNWVFSGVYGPTL 419

Query: 156 DRDRGLQWDFLLQARRKWGDSWLLTGDFNDI-CSNLEKKGGRL 31
            R R L W+ L   RR W D W + GDFN I   N  ++GGRL
Sbjct: 420 KRYRELFWEELRAIRRLWSDPWCIGGDFNLIRFPNESRRGGRL 462