BLASTX nr result

ID: Rehmannia24_contig00021640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00021640
         (430 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...    55   1e-05
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a...    55   1e-05
gb|AEW22801.1| RNA-dependent RNA polymerase, partial [Tulip viru...    55   1e-05
gb|AAW30634.1| replicase [Tulip virus X]                               55   1e-05

>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
           gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
           [Tulip virus X]
          Length = 1361

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = +2

Query: 269 AHNQAAQDS*EILKLYTHPKKIAKKPTNLYKNHTHAAAKAIESDLYEVVSHYLP 430
           A + AA D+ E+L + +HP  I          HTHAAAKAIESDLYEV SHYLP
Sbjct: 42  AQSPAAADTLELLGINSHPLAITP--------HTHAAAKAIESDLYEVTSHYLP 87


>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
           virus]
          Length = 669

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = +2

Query: 269 AHNQAAQDS*EILKLYTHPKKIAKKPTNLYKNHTHAAAKAIESDLYEVVSHYLP 430
           A +  A D+ E+L + +HP  I          HTHAAAKAIESDLYEVVSHYLP
Sbjct: 42  AQSPEAADALEVLGINSHPYAITP--------HTHAAAKAIESDLYEVVSHYLP 87


>gb|AEW22801.1| RNA-dependent RNA polymerase, partial [Tulip virus X]
           gi|363412003|gb|AEW22802.1| RNA-dependent RNA
           polymerase, partial [Tulip virus X]
          Length = 72

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = +2

Query: 269 AHNQAAQDS*EILKLYTHPKKIAKKPTNLYKNHTHAAAKAIESDLYEVVSHYLP 430
           A + AA D+ E+L + +HP  I          HTHAAAKAIESDLYEV SHYLP
Sbjct: 6   AQSPAAADTLELLGINSHPLAITP--------HTHAAAKAIESDLYEVTSHYLP 51


>gb|AAW30634.1| replicase [Tulip virus X]
          Length = 144

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = +2

Query: 269 AHNQAAQDS*EILKLYTHPKKIAKKPTNLYKNHTHAAAKAIESDLYEVVSHYLP 430
           A + AA D+ E+L + +HP  I          HTHAAAKAIESDLYEV SHYLP
Sbjct: 30  AQSPAAADTLELLGINSHPLAITP--------HTHAAAKAIESDLYEVTSHYLP 75


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