BLASTX nr result
ID: Rehmannia24_contig00021417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00021417
(987 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 385 e-108
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 385 e-108
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-... 385 e-108
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group] 384 e-107
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc... 384 e-107
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc... 384 e-107
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc... 384 e-107
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group... 384 e-107
gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group] 384 e-107
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 384 e-107
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group] 384 e-107
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap... 384 e-107
gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group] 384 e-107
emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group] 384 e-107
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc... 384 e-107
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group] 384 e-107
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] gi... 384 e-107
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group] 384 e-107
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc... 384 e-107
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 384 e-107
>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 385 bits (990), Expect(2) = e-108
Identities = 184/318 (57%), Positives = 239/318 (75%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 610 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 669
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA+FFE+ FPMKD S P + +EE + PRR
Sbjct: 670 GTIMESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 729
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 730 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 789
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 790 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 849
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 850 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 909
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 910 QWHEKFDKTLTSAGFAVN 927
Score = 33.9 bits (76), Expect(2) = e-108
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 591 LNRVPNRNKDKTPYEIWIGRK 611
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 385 bits (988), Expect(2) = e-108
Identities = 185/318 (58%), Positives = 239/318 (75%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L++WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE ++
Sbjct: 649 RKPSLSYLRIWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
IIESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIIESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD +IS GF +N
Sbjct: 949 QWHEKFDKTLISAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-108
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 713
Score = 385 bits (988), Expect(2) = e-108
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 42 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 101
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 102 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 161
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 162 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 221
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 222 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 281
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 282 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 341
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 342 QWHEKFDKTLTSAGFVVN 359
Score = 33.9 bits (76), Expect(2) = e-108
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 23 LNRVPNRNKDKTPYEIWIGRK 43
>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1861
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 1063 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 1122
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 1123 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 1182
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 1183 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 1242
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 1243 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 1302
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 1303 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 1362
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 1363 QWHEKFDKTLTSAGFAVN 1380
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 1044 LNRVPNRNKDKTPYEIWIGRK 1064
>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1320
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1320
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEIPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSLITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEIPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSLITPPEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]
Length = 1113
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 442 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 501
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 502 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 561
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 562 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 621
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 622 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 681
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 682 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 741
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 742 QWHEKFDKTLTSAGFAVN 759
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 423 LNRVPNRNKDKTPYEIWIGRK 443
>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 384 bits (986), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 844 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 903
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 904 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 963
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 964 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 1023
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 1024 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 1083
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 1084 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 1143
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 1144 QWHEKFDKTLTSAGFGVN 1161
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 825 LNRVPNRNKDKTPYEIWIGRK 845
>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 384 bits (987), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 738 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 797
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 798 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 857
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 858 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 917
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 918 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 977
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 978 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 1037
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 1038 QWHEKFDKTLTSAGFAVN 1055
Score = 33.5 bits (75), Expect(2) = e-107
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNR+ +N DKTPYE+W +K
Sbjct: 719 LNRIPNRNKDKTPYEIWIGRK 739
>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
gi|38345937|emb|CAD41412.2| OSJNBb0078D11.12 [Oryza
sativa Japonica Group]
Length = 1320
Score = 384 bits (986), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 237/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELISEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKLISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 949 QWHEKFDKTLTSAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 384 bits (986), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 649 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708
Query: 749 NIIIESRDAVFFENIFPMKDKLSR--------PVGACXXXXXXXXSPTIFNEEPIE-PRR 597
I+ESRDA FFE+ FPMKD S P + E+ E PRR
Sbjct: 709 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPSEQTEHTHELVSEEDVSEAPRR 768
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEA+ EM+S+ N TW +T+
Sbjct: 769 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAICSEMDSIIANGTWEVTER 828
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 829 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 888
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 889 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 948
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD +IS GF +N
Sbjct: 949 QWHEKFDKTLISAGFAVN 966
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRK 650
>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1095
Score = 384 bits (986), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 238/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP+L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 442 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 501
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 502 GTIMESRDATFFESFFPMKDTHSGSNQPFEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 561
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 562 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 621
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 622 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 681
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 682 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 741
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 742 QWHEKFDKTLTSAGFAVN 759
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 423 LNRVPNRNKDKTPYEIWIGRK 443
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 384 bits (985), Expect(2) = e-107
Identities = 184/318 (57%), Positives = 237/318 (74%), Gaps = 9/318 (2%)
Frame = -2
Query: 929 KKPTLKFLKVWGCLAKVNIPIVKKRKIGPKTIDCVFVGYSSNSPTYRFLVFNSEDPEISN 750
+KP L +L+ WGCLAKVN+PI KKRK+GPKT+DCVF+GY+ +S YRFL+ SE P++
Sbjct: 865 RKPLLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 924
Query: 749 NIIIESRDAVFFENIFPMKDKLSRPVGACXXXXXXXXSPT-------IFNEEPIE--PRR 597
I+ESRDA FFE+ FPMKD S P + +EE + PRR
Sbjct: 925 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRR 984
Query: 596 SKRSRKAKNFGDDFYTFLLEDDPKTYNDAMLSLESPFWKEAVNDEMNSLFINKTWVLTDL 417
SKR R AK+FGDDF +L++D PK+ ++A S ++ +WKEAV EM+S+ N TW +T+
Sbjct: 985 SKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTER 1044
Query: 416 PPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLI 237
P GCKP+G KW+FKKKLR DG+IEKYKARLV KG+ QK G DFFDTYSPV+++TTIR+L+
Sbjct: 1045 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 1104
Query: 236 AIASVYKLDIHQMDVKTAFLNGDLEEEIYMNQPEGFVVAGEEKKVCKLVKSLYGLKQAPM 57
++A+ + L +HQMDVKTAFLNG+L+EEIYM+QP+GFVV G+E KVCKL+KSLYGLKQAP
Sbjct: 1105 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 1164
Query: 56 QWHEKFDSVIISNGFYIN 3
QWHEKFD + S GF +N
Sbjct: 1165 QWHEKFDKTLTSAGFAVN 1182
Score = 33.9 bits (76), Expect(2) = e-107
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 987 LNRVSYKNSDKTPYELWKNKK 925
LNRV +N DKTPYE+W +K
Sbjct: 846 LNRVPNRNKDKTPYEIWIGRK 866