BLASTX nr result
ID: Rehmannia24_contig00021196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00021196
(1376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 533 e-168
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 526 e-166
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 533 e-165
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 529 e-165
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr... 511 e-163
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 531 e-163
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ... 518 e-163
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 518 e-163
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 509 e-162
gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrola... 515 e-162
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 511 e-161
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 521 e-160
gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus pe... 508 e-158
ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutr... 505 e-157
ref|XP_004507705.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 497 e-155
ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabido... 493 e-154
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 484 e-154
ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arab... 493 e-153
ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicag... 487 e-151
ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 480 e-151
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Vitis vinifera]
Length = 482
Score = 533 bits (1373), Expect(2) = e-168
Identities = 263/354 (74%), Positives = 298/354 (84%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFSVVN K S+VQAL+VVPTRELG+QVTKVARMLAAK +E E EQ+
Sbjct: 123 AQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQK 182
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG L+RHKSWLK EPP IV+AT+RSLCQML+KQ L+ MRVLVIDEVDF+
Sbjct: 183 SCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFM 242
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIPQHRRF++DCIQQKWT++DVVHVHVNP+
Sbjct: 243 FNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNPI 302
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPS L+HRFVIC K ER TLL LL SDAP+ IIFVGEQSEKSKKAGNAP TLLI+
Sbjct: 303 EPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLID 362
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLKTS+ GCP+++LLEEDMNFN RAASL++V+Q GGYLL++TDIAARGVDLPETTHIYNF
Sbjct: 363 FLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNF 422
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEEL 1345
DLP+ +YLHRAGR RKPFSD KC VT+IIT+EERFVLQR+ENEL F CEEL
Sbjct: 423 DLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFHCEEL 476
Score = 87.4 bits (215), Expect(2) = e-168
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +3
Query: 18 RPNCTVPLPFNRTNRMLDSLPISASLSSTCVGE-SDVGTTKNTCSTLRELCQGHVPDHVL 194
R + TV +N ++ P A+L+S+ + E SD+G TLRE+CQG VP+HVL
Sbjct: 35 RTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIG---ERTLTLREICQGCVPEHVL 91
Query: 195 RRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
RR EEVG+I+PT VQ +ALPVL SGRDC++ AQ
Sbjct: 92 RRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQ 124
>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gi|11385590|gb|AAG34876.1|AF261021_1 putative chloroplast
RNA helicase VDL isoform 1 [Nicotiana tabacum]
Length = 466
Score = 526 bits (1354), Expect(2) = e-166
Identities = 262/356 (73%), Positives = 295/356 (82%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTLAYLL I SV++++RS+VQAL+VVPTRELGMQVTKVARMLAAK ELES +
Sbjct: 111 AQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPK 170
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML+K L LD +VLV+DEVDF+
Sbjct: 171 SCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFM 230
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN V
Sbjct: 231 FNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSV 290
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPSCL+HRFV+C KRE+ LL LLQ D+P+SAIIFV EQSEKSKKAGNAPP TLL++
Sbjct: 291 EPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVD 350
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FL +S G + LLEEDMNFN+RAASL++++ GGYLLVATDIAARGVDLPETTHIYNF
Sbjct: 351 FLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNF 410
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELLF 1351
D+PKDA NYLHRAGRTGRKPFSD KCFVTSIIT EERFVLQRFENEL F CE+L F
Sbjct: 411 DIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQLFF 466
Score = 89.0 bits (219), Expect(2) = e-166
Identities = 46/92 (50%), Positives = 62/92 (67%)
Frame = +3
Query: 18 RPNCTVPLPFNRTNRMLDSLPISASLSSTCVGESDVGTTKNTCSTLRELCQGHVPDHVLR 197
+PN T P + P+ AS S++ V E+ T ++ +TLRELC GHVP+HV+R
Sbjct: 26 KPNYTYRTP----KFLFRQKPLIASFSTSDV-EARTETKDSSTATLRELCHGHVPEHVIR 80
Query: 198 RAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
R EEVGY++PT VQ +ALP L+SGRDCV+ AQ
Sbjct: 81 RVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQ 112
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 533 bits (1373), Expect(2) = e-165
Identities = 263/354 (74%), Positives = 298/354 (84%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFSVVN K S+VQAL+VVPTRELG+QVTKVARMLAAK +E E EQ+
Sbjct: 127 AQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQK 186
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG L+RHKSWLK EPP IV+AT+RSLCQML+KQ L+ MRVLVIDEVDF+
Sbjct: 187 SCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFM 246
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIPQHRRF++DCIQQKWT++DVVHVHVNP+
Sbjct: 247 FNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNPI 306
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPS L+HRFVIC K ER TLL LL SDAP+ IIFVGEQSEKSKKAGNAP TLLI+
Sbjct: 307 EPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLID 366
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLKTS+ GCP+++LLEEDMNFN RAASL++V+Q GGYLL++TDIAARGVDLPETTHIYNF
Sbjct: 367 FLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNF 426
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEEL 1345
DLP+ +YLHRAGR RKPFSD KC VT+IIT+EERFVLQR+ENEL F CEEL
Sbjct: 427 DLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFHCEEL 480
Score = 78.6 bits (192), Expect(2) = e-165
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Frame = +3
Query: 18 RPNCTVPLPFNRTNRMLDSLPISASLSSTCVGE-SDVGTTKNTCSTLRELCQGHVPDHVL 194
R + TV +N ++ P A+L+S+ + E SD+G TLRE+CQG VP+HV+
Sbjct: 35 RTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIG---ERTLTLREICQGCVPEHVI 91
Query: 195 R----RAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
R EEVG+I+PT VQ +ALPVL SGRDC++ AQ
Sbjct: 92 ALICFRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQ 128
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 529 bits (1362), Expect(2) = e-165
Identities = 260/354 (73%), Positives = 297/354 (83%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTLAYLLLIFSV+N +RS+VQAL+VVPTRELG+QVTKVARMLAA E ++EQ+
Sbjct: 122 AQTGSGKTLAYLLLIFSVINTQRSAVQALIVVPTRELGIQVTKVARMLAATPTENDAEQK 181
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML+K L L+ M+VLVIDEVDF+
Sbjct: 182 SCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQMLEKHLLKLESMQVLVIDEVDFM 241
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN N+RQT+FASASIPQH RF+YDCIQQKWT+ DVVHVHVNP+
Sbjct: 242 FNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVHVNPI 301
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMP+CL HRFVIC K++R+ TLL LLQSDAP+S IIFVGEQSEKSKKAGN PPT L++
Sbjct: 302 EPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPTIDLVD 361
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLKTS+ C E++LLEEDMNFN RAASL++V+Q GGYLLVATDIAARGVDLPE THIYNF
Sbjct: 362 FLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVDLPEITHIYNF 421
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEEL 1345
+LP+ A +YLHRAGRTGRKPFSD KC VTSII EERFVLQR+ENEL F CEEL
Sbjct: 422 NLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFNCEEL 475
Score = 82.0 bits (201), Expect(2) = e-165
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 78 PISASLSSTCVGE-SDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALP 254
P+ A L+S + + +D K TLRE+C G VP+H+LRR EEVGY +PT VQ +ALP
Sbjct: 51 PLKAILNSPSLTKVADDAKEKGEALTLREICLGRVPEHLLRRVEEVGYAVPTDVQKQALP 110
Query: 255 VLFSGRDCVIQAQ 293
VLFSGRDC++ AQ
Sbjct: 111 VLFSGRDCILHAQ 123
>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
gi|557521726|gb|ESR33093.1| hypothetical protein
CICLE_v10004897mg [Citrus clementina]
Length = 473
Score = 511 bits (1317), Expect(2) = e-163
Identities = 249/354 (70%), Positives = 298/354 (84%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFS+VNA+RS+VQA++VVPTRELGMQVTKVAR+LAAK + + E +
Sbjct: 114 AQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHK 173
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
CTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQ+++K L+ ++VLVIDEVDFL
Sbjct: 174 PCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFL 233
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIPQHRRF++DCIQQKWT++DVVHVHVN +
Sbjct: 234 FNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNAI 293
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
+P+PSCL+HRFVICGK+ +Y TLL L+QSDAP+S IIFVGEQSEKSKKAGNAP TTLL++
Sbjct: 294 KPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVD 353
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FL S++G +++LLEE+MNFN RAASL +V+Q GGYLLV+TDIAARG+DLPETTHIYNF
Sbjct: 354 FLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNF 413
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEEL 1345
DLP+ A +YLHRAGRTGRKPFSD K VTSIIT+EE FVLQR+ENEL+F+ EEL
Sbjct: 414 DLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 467
Score = 93.2 bits (230), Expect(2) = e-163
Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = +3
Query: 78 PISASLSSTCVGESDVGT-TKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALP 254
P+ A LSS+ V ++ T N TLRELCQGHVP+HVLRR +E GY+LPT +Q EALP
Sbjct: 43 PLRAVLSSSAVSTEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALP 102
Query: 255 VLFSGRDCVIQAQ 293
VLFS RDC++ AQ
Sbjct: 103 VLFSSRDCILHAQ 115
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 531 bits (1368), Expect(2) = e-163
Identities = 258/354 (72%), Positives = 302/354 (85%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFSVVN +RS+VQAL+VVPTRELGMQVTKVAR LAAK +E + EQ+
Sbjct: 109 AQTGSGKTLTYLLLIFSVVNTQRSAVQALIVVPTRELGMQVTKVARTLAAKPMESDLEQK 168
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SC+VMALLDGGTLRRHKSWLK EPP +V+AT+ SLCQ LDKQ L L+ MRVLVIDEVDF+
Sbjct: 169 SCSVMALLDGGTLRRHKSWLKAEPPTVVVATIGSLCQQLDKQILTLESMRVLVIDEVDFI 228
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN I+NRQT+FASASIPQHRRF+++C+QQKWT+++VVHVHVNP+
Sbjct: 229 FNSSKQVSSLRKLLTSYSTISNRQTVFASASIPQHRRFLHECVQQKWTKSNVVHVHVNPI 288
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPSCL+H FVICGK +R TLL LL SDAP S IIFVGEQSEKSKKAGNAPPTT+L++
Sbjct: 289 EPMPSCLHHNFVICGKNKRLQTLLSLLHSDAPHSGIIFVGEQSEKSKKAGNAPPTTILMD 348
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLK S++G E++LLEEDMN N R ASL++V+Q GGYLLV+TD+AARGVDLPETTHIYNF
Sbjct: 349 FLKDSYKGGSEILLLEEDMNINSRTASLSEVRQGGGYLLVSTDLAARGVDLPETTHIYNF 408
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEEL 1345
DLP+ AT+YLHRAGRTGRKPFS+ +C VT+IIT+EERFVLQR+ENEL F CEEL
Sbjct: 409 DLPRTATDYLHRAGRTGRKPFSNEECTVTNIITSEERFVLQRYENELMFNCEEL 462
Score = 72.4 bits (176), Expect(2) = e-163
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Frame = +3
Query: 9 SFTRPNCTVPLPFNRTN---RMLDSLPISA----SLSSTCVGESDVGTTKNTCSTLRELC 167
S P + LPF N ++ S+P S S+ + +D + +TLR LC
Sbjct: 12 SLKLPYSSHHLPFRFRNPNPSLVSSIPRSPLAIRSVPNLLSSAADAVPDEQRAATLRRLC 71
Query: 168 QGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
+G VP+HV+ EEVGYI PT VQ +ALP+LFSGRDCV+ AQ
Sbjct: 72 EGLVPEHVV---EEVGYIEPTDVQRQALPILFSGRDCVLHAQ 110
>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum]
Length = 466
Score = 518 bits (1335), Expect(2) = e-163
Identities = 258/354 (72%), Positives = 293/354 (82%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTLAYLL + SV++++RS+VQAL+VVPTRELGMQVTKVAR LAAK EL+S +
Sbjct: 111 AQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPK 170
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML+K L LD +VLV+DEVDF+
Sbjct: 171 SCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFM 230
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN V
Sbjct: 231 FNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSV 290
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPSCL+HRFV+C KRE+ LL LLQ D+P+SAIIFV EQSEKSKKAGNAPP TLL++
Sbjct: 291 EPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVD 350
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FL +S G + LLEEDMNFN+RAASL++++ GGYLLVATDIAARGVDLPETTHIYNF
Sbjct: 351 FLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNF 410
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEEL 1345
D+PKDA NYLHRAGRTGRKPFSD KCFVTSIIT EERFVLQRFENEL F CE+L
Sbjct: 411 DIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQL 464
Score = 84.0 bits (206), Expect(2) = e-163
Identities = 44/92 (47%), Positives = 60/92 (65%)
Frame = +3
Query: 18 RPNCTVPLPFNRTNRMLDSLPISASLSSTCVGESDVGTTKNTCSTLRELCQGHVPDHVLR 197
+PN T P + P+ AS S++ + E+ T ++ +T RELC GHVP+HV+R
Sbjct: 26 KPNYTYRTP----KFLFRQKPLIASFSTSDI-EARTETKDSSTATPRELCHGHVPEHVIR 80
Query: 198 RAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
R EEVGY++PT VQ ALP L+SGRDCV+ AQ
Sbjct: 81 RVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQ 112
>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Solanum lycopersicum]
Length = 459
Score = 518 bits (1335), Expect(2) = e-163
Identities = 258/356 (72%), Positives = 296/356 (83%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTLAYLL + SVV+++RS+VQAL+VVPTRELGMQVTKVARMLAA E ES +
Sbjct: 104 AQTGSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLK 163
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG L+RHKSWLK EPP IV+AT+ SLCQML+K L LD +VLV+DEVDF+
Sbjct: 164 SCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFM 223
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN V
Sbjct: 224 FNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSV 283
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPSCL+HRFV+C + E+ LL LLQ+D+P+SAIIFV EQSEKSKKAG+APPTTLL++
Sbjct: 284 EPMPSCLHHRFVVCNRMEKNPMLLSLLQTDSPESAIIFVSEQSEKSKKAGSAPPTTLLVD 343
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLK+S ++ LLEEDMNFNQRAASL++++ GGYLLVATDIAARGVDLPETTHIYNF
Sbjct: 344 FLKSSCGRFSDISLLEEDMNFNQRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNF 403
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELLF 1351
D+PKDA NYLHRAGRTGRKPFSD KCFVTSIIT EERFVL+RFENEL F CE+L F
Sbjct: 404 DIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLKRFENELMFCCEQLFF 459
Score = 84.0 bits (206), Expect(2) = e-163
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = +3
Query: 78 PISASLSSTCVGESDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPV 257
P AS SS+ V E+ T ++ +TLRELC GHV +HV+ RAEE+GY++PT VQ +ALP
Sbjct: 35 PSRASFSSSNV-ETTTLTKDSSTTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALPF 93
Query: 258 LFSGRDCVIQAQ 293
LFSGRDCV+ AQ
Sbjct: 94 LFSGRDCVLHAQ 105
>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 473
Score = 509 bits (1312), Expect(2) = e-162
Identities = 248/354 (70%), Positives = 298/354 (84%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFS+VNA+RS+VQA++VVPTRELGMQVTKVAR+LAAK + + E +
Sbjct: 114 AQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHK 173
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
CTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQ+++K L+ ++VLVIDEVDFL
Sbjct: 174 PCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFL 233
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIPQHRRF+++CIQQKWT++DVVHVHVN +
Sbjct: 234 FNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAI 293
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
+P+PSCL+HRFVICGK+ +Y TLL L+QSDAP+S IIFVGEQSEKSKKAGNAP TTLL++
Sbjct: 294 KPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVD 353
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FL S++G +++LLEE+MNFN RAASL +V+Q GGYLLV+TDIAARG+DLPETTHIYNF
Sbjct: 354 FLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNF 413
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEEL 1345
DLP+ A +YLHRAGRTGRKPFSD K VTSIIT+EE FVLQR+ENEL+F+ EEL
Sbjct: 414 DLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 467
Score = 92.4 bits (228), Expect(2) = e-162
Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = +3
Query: 78 PISASLSSTCVGESDVGT-TKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALP 254
P+ A LSS+ V ++ T N TLRELCQGHVP+HVLRR +E GY+LPT +Q EALP
Sbjct: 43 PLRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALP 102
Query: 255 VLFSGRDCVIQAQ 293
VLFS RDC++ AQ
Sbjct: 103 VLFSSRDCILHAQ 115
>gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
Length = 477
Score = 515 bits (1327), Expect(2) = e-162
Identities = 254/355 (71%), Positives = 296/355 (83%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLI+SV+N KRS+VQAL+VVPTRELGMQVTKVARMLAAK ++ E EQ+
Sbjct: 118 AQTGSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQK 177
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
S TVMALLDGG LRRHKSWLK EPP IV+AT+ SL QML+KQ LD MR+LV+DEVDF+
Sbjct: 178 SYTVMALLDGGMLRRHKSWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFI 237
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIPQHRRF++DCIQQKWT+ DVVHVHVNPV
Sbjct: 238 FNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKGDVVHVHVNPV 297
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
+PMPSCL HRFVICG++E++ LL LLQSD P+S IIFV EQSEKSKKAG AP TTL+I+
Sbjct: 298 KPMPSCLLHRFVICGRKEKHRLLLSLLQSDLPESGIIFVNEQSEKSKKAGKAPSTTLIID 357
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLK S+ G E++LLE++MNFN RAASL++V+Q GG+LLV+TDIAARG+DLPETT IYNF
Sbjct: 358 FLKASYGGSLEIILLEDNMNFNSRAASLSEVRQGGGHLLVSTDIAARGIDLPETTDIYNF 417
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLPK A +YLHRAGRTGRKPFSD KC VT+II +EERFVLQR+ENEL F CEEL+
Sbjct: 418 DLPKTAIDYLHRAGRTGRKPFSDKKCTVTNIILSEERFVLQRYENELMFNCEELI 472
Score = 84.3 bits (207), Expect(2) = e-162
Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Frame = +3
Query: 42 PFNRTNRMLDSLPISASLSSTCVGESDVGTTKN---TCS--TLRELCQGHVPDHVLRRAE 206
P NR + S SA + + V TK C+ TLRE+CQ HVPDHVL R E
Sbjct: 31 PRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDHVPDHVLGRME 90
Query: 207 EVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
E+GY++PT VQ EALPVLFSG DC++ AQ
Sbjct: 91 ELGYVMPTDVQREALPVLFSGNDCILHAQ 119
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Solanum tuberosum]
Length = 462
Score = 511 bits (1316), Expect(2) = e-161
Identities = 258/359 (71%), Positives = 294/359 (81%), Gaps = 3/359 (0%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTLAYLL + SVV+++RS+VQAL+VVPTRELGMQVTKVARMLAA E ES +
Sbjct: 104 AQTGSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLK 163
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG L+RHKSWLK EPP IV+AT+ SLCQML+K L LD +VLV+DEVDF+
Sbjct: 164 SCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFM 223
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN V
Sbjct: 224 FNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSV 283
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPSCL+HRFV+C + E+ LL LLQ+D+P SAIIFV EQS KSKKAG+APPTTLL++
Sbjct: 284 EPMPSCLHHRFVVCNRTEKNPMLLSLLQTDSPGSAIIFVSEQSGKSKKAGSAPPTTLLVD 343
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVK---QSGGYLLVATDIAARGVDLPETTHI 1174
FLK+S ++ LLEEDMNFNQRAASL++++ GGYLLVATDIAARGVDLPETTHI
Sbjct: 344 FLKSSRGRFSDVSLLEEDMNFNQRAASLSELRGGGGGGGYLLVATDIAARGVDLPETTHI 403
Query: 1175 YNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELLF 1351
YNFD+PKDA NYLHRAGRTGRKPFSD KCFVTSIIT EERFVLQRFENEL F CE+L F
Sbjct: 404 YNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQLFF 462
Score = 87.4 bits (215), Expect(2) = e-161
Identities = 43/72 (59%), Positives = 55/72 (76%)
Frame = +3
Query: 78 PISASLSSTCVGESDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPV 257
P+ S SS+ V E+ T ++ +TLRELC GHV +HV+RRAEEVGY++PT VQ +ALP
Sbjct: 35 PLRVSFSSSNV-ETTTLTKDSSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPF 93
Query: 258 LFSGRDCVIQAQ 293
LFSGRDCV+ AQ
Sbjct: 94 LFSGRDCVLHAQ 105
>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 476
Score = 521 bits (1341), Expect(2) = e-160
Identities = 254/352 (72%), Positives = 296/352 (84%)
Frame = +2
Query: 293 GSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCT 472
GSGKTLAYLLLI+SV+NA+RS+VQAL++VPTRELGMQVTKVARMLAAK +++ T
Sbjct: 131 GSGKTLAYLLLIYSVINAQRSAVQALIIVPTRELGMQVTKVARMLAAKPMDV-------T 183
Query: 473 VMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFLFNX 652
VMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML+K LD M+VLVIDEVDF+FN
Sbjct: 184 VMALLDGGMLRRHKSWLKAEPPKIVVATIASLCQMLEKHIFKLDSMQVLVIDEVDFMFNS 243
Query: 653 XXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPM 832
N+RQT+FASASIPQHRRF+YDCIQQKWT++D VHVH+NPV+PM
Sbjct: 244 SKQVSSLRKLLTSYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKSDAVHVHINPVQPM 303
Query: 833 PSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLK 1012
PSCL HRFVIC K +R+ LL LLQ DAP+S I+FVGEQSEKSKKAG+APPTTLL++FL+
Sbjct: 304 PSCLQHRFVICSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAGHAPPTTLLVDFLE 363
Query: 1013 TSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLP 1192
TS+ C +++LLEEDMNFN RAASL++VKQ GGYLLVATDIAARGVDLPETTHIYNF+LP
Sbjct: 364 TSYSDCSDILLLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGVDLPETTHIYNFELP 423
Query: 1193 KDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
+ A +YLHRAGRTGRKPFSD KC+ T+IIT EERFVLQR+ENEL F CEEL+
Sbjct: 424 RTAVDYLHRAGRTGRKPFSDEKCYATNIITPEERFVLQRYENELMFNCEELI 475
Score = 74.3 bits (181), Expect(2) = e-160
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +3
Query: 114 ESDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
E N TLRELCQ +VP+ VL R EE+GY++PT VQ +ALPVLFSG+DC++ Q
Sbjct: 70 EEQFDPKSNHFLTLRELCQNYVPEPVLHRMEEIGYVMPTDVQRQALPVLFSGQDCILHGQ 129
>gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
Length = 473
Score = 508 bits (1308), Expect(2) = e-158
Identities = 253/355 (71%), Positives = 294/355 (82%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLL+FS+VNA+RS+VQAL+VVPTRELGMQVTKVARMLA K E E EQ+
Sbjct: 119 AQTGSGKTLTYLLLVFSIVNARRSAVQALIVVPTRELGMQVTKVARMLATKPKEGELEQK 178
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML+K + L+ MRVLVIDEVDF+
Sbjct: 179 SCTVMALLDGGMLMRHKSWLKAEPPTIVVATIGSLCQMLEKHMIKLEAMRVLVIDEVDFM 238
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
F+ IN RQT+FASASIPQH+ F+ CIQQKWT+ D +HVHVNPV
Sbjct: 239 FSSKQVSSLRKLLTSYSS-INTRQTVFASASIPQHKIFLDKCIQQKWTKNDTIHVHVNPV 297
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPSCL+HRFVIC K R+ TLL LLQSDAPQSAI+FVGEQSEKSKKAGNA TLLI
Sbjct: 298 EPMPSCLHHRFVICLKNRRHETLLSLLQSDAPQSAIVFVGEQSEKSKKAGNASSATLLIN 357
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLK S+EG +++LLEEDMNFN RAASL++V+Q+G YLLV+TDIAARG+DLPETTHIYN+
Sbjct: 358 FLKASYEGYSDILLLEEDMNFNSRAASLSEVRQAGSYLLVSTDIAARGLDLPETTHIYNY 417
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLP+ A +YLHRAGRTGRKPFSD KC VTSII ++ERFVL+++ENEL F CEEL+
Sbjct: 418 DLPRTAIDYLHRAGRTGRKPFSDKKCSVTSIIISKERFVLEKYENELMFNCEELI 472
Score = 79.3 bits (194), Expect(2) = e-158
Identities = 40/86 (46%), Positives = 58/86 (67%)
Frame = +3
Query: 36 PLPFNRTNRMLDSLPISASLSSTCVGESDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVG 215
P F+ + + PI A L+ST + ++ G+ TLR++CQ HVPDHVL + EE+G
Sbjct: 37 PRLFSSNGFVSNCSPIQALLNSTPI-TTEAGSEPEPF-TLRQICQSHVPDHVLCKMEELG 94
Query: 216 YILPTHVQHEALPVLFSGRDCVIQAQ 293
+++PT VQ +ALP LFSGRDC++ AQ
Sbjct: 95 FVVPTPVQRQALPTLFSGRDCILHAQ 120
>ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutrema salsugineum]
gi|557101569|gb|ESQ41932.1| hypothetical protein
EUTSA_v10013438mg [Eutrema salsugineum]
Length = 473
Score = 505 bits (1300), Expect(2) = e-157
Identities = 247/355 (69%), Positives = 294/355 (82%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFS++N +RSSVQA++VVPTRELGMQVTKVARMLAAKS ++E +
Sbjct: 120 AQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSTDIEVK-- 177
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
CTVMALLDGG LRRHKSWLK EPPAIV+AT+ SLC ML+K L LD +RVLV+DEVDFL
Sbjct: 178 GCTVMALLDGGMLRRHKSWLKAEPPAIVVATVASLCHMLEKHILRLDSVRVLVVDEVDFL 237
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
F + RQT+FASASIPQH+ F++DCIQQKWT+ DVVH+HV+ +
Sbjct: 238 FYSSKQVGSVRKLLTTFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHIHVSAI 297
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
PMP CL HRFV+CGK+ ++ LL LL+SDAP+SAIIF GEQSEKSKKAGN P TTLLIE
Sbjct: 298 MPMPLCLLHRFVVCGKKNKHQILLALLKSDAPESAIIFAGEQSEKSKKAGNDPSTTLLIE 357
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLK S++G E++LLEEDMNFN RAASLT+++Q GG+LLV+TDIAARG+DLPETTHI+NF
Sbjct: 358 FLKASYDGLLEILLLEEDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNF 417
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLP+ AT+YLHRAGR GRKPFSD KC VT++IT+EERFVLQ+FENEL F CEEL+
Sbjct: 418 DLPQTATDYLHRAGRAGRKPFSDRKCIVTNLITSEERFVLQKFENELMFSCEELI 472
Score = 79.3 bits (194), Expect(2) = e-157
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Frame = +3
Query: 12 FTRPNCTVPLPFNRTNRMLDSLPISA------SLSSTCVGESDVGTTKNTCSTLRELCQG 173
F R T+ F+ T R + S S +++ C G T+ T TLR +C+G
Sbjct: 25 FARQKLTL---FHSTTRAIKSSSNSRITINLQAVADACSEIESNGVTETTDLTLRNICEG 81
Query: 174 HVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
VP+H++ R EE+G++ PT++Q EALP LF+GRDC++ AQ
Sbjct: 82 FVPEHIIHRMEEIGFVFPTNIQREALPTLFTGRDCILHAQ 121
>ref|XP_004507705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Cicer arietinum]
Length = 470
Score = 497 bits (1280), Expect(2) = e-155
Identities = 240/355 (67%), Positives = 290/355 (81%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLI+S++N ++S+VQALV+VPTRELGMQVTKVAR+LAAK +E EQ+
Sbjct: 115 AQTGSGKTLTYLLLIYSIINTRKSAVQALVLVPTRELGMQVTKVARILAAKPTGVEGEQK 174
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCT+MALLDGGTLRR K+W K EPPA+V+AT+ SLCQML++Q +L +RVLV+DEVDFL
Sbjct: 175 SCTIMALLDGGTLRRQKTWFKAEPPAVVVATVGSLCQMLERQLFSLGTLRVLVVDEVDFL 234
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIP H RF++D +QQKWT+ DV+H+HV+PV
Sbjct: 235 FNSSKQASSLRKILTTYSSCNNRQTVFASASIPHHNRFLHDAVQQKWTKRDVIHIHVSPV 294
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPS LYHRF++C + + TLL L+QSDAP+S IIFVGEQSEKSKKAGNAP T+LLI+
Sbjct: 295 EPMPSRLYHRFIVCDTKRKLQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTSLLID 354
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLK S+ G +++LLE+DMNFN RAASL +V++ GGYLLVATD+AARGVD PE THIYNF
Sbjct: 355 FLKASYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNF 414
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLPK+A +YLHRAGRT RKPFSD C VTSII EERFVLQR+ENEL F CEEL+
Sbjct: 415 DLPKNAIDYLHRAGRTCRKPFSDINCNVTSIIVPEERFVLQRYENELMFVCEELI 469
Score = 79.0 bits (193), Expect(2) = e-155
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Frame = +3
Query: 9 SFTRPNCTVPLPFNRTN--RMLDSL--------PISASLSSTCVGESDVGTTKNTCSTLR 158
SF P C +P N + R+ S+ P++ S + D G K T TL+
Sbjct: 15 SFENPTC-IPRSHNNHHFVRLFSSIHINRVSKTPLAIQNPSPTIPTPDNG--KLTTPTLK 71
Query: 159 ELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
+LCQ HVPD +L R EEVGY++PT VQ +ALP LF+GRDC++ AQ
Sbjct: 72 QLCQTHVPDQILLRMEEVGYVMPTEVQRQALPRLFTGRDCILHAQ 116
>ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabidopsis thaliana]
gi|108861900|sp|Q3E9C3.1|RH58_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 58,
chloroplastic; Flags: Precursor
gi|332005287|gb|AED92670.1| DEAD-box ATP-dependent RNA
helicase 58 [Arabidopsis thaliana]
Length = 472
Score = 493 bits (1270), Expect(2) = e-154
Identities = 242/355 (68%), Positives = 290/355 (81%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFS++N +RSSVQA++VVPTRELGMQVTKVARMLAAKS E + +
Sbjct: 120 AQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKS---EIDVK 176
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
CTVMALLDGGTLRRHKSWLK EPPAI++AT+ SLC ML+K +D +RVLV+DEVDFL
Sbjct: 177 GCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFL 236
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
F + RQT+FASASIPQH+ F++DCIQQKWT+ DVVHVHV+ +
Sbjct: 237 FYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAI 296
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
PMP CL HRFV+C K ++ LL LL+SDAP+SAIIFVGEQSEKSKKAGN P TTLL+E
Sbjct: 297 MPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLME 356
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLKTS++G E++LLE DMNFN RAASLT+++Q GG+LLV+TDIAARG+DLPETTHI+NF
Sbjct: 357 FLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNF 416
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLP+ T+YLHRAGR GRKPFSD KC V ++IT+EERFVLQR+ENEL F CEE++
Sbjct: 417 DLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQRYENELMFSCEEMM 471
Score = 80.9 bits (198), Expect(2) = e-154
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Frame = +3
Query: 54 TNRMLDSLPISASLSSTCVGESDVGTTKNTCS------TLRELCQGHVPDHVLRRAEEVG 215
T R L S P S ++ V E+ N+ + TLR++CQG VP+H+L R EE+G
Sbjct: 36 TRRALKSSPSSRIINLQAVAETSSEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIG 95
Query: 216 YILPTHVQHEALPVLFSGRDCVIQAQ 293
++ PT +Q EALP LF+GRDC++ AQ
Sbjct: 96 FVFPTDIQREALPTLFTGRDCILHAQ 121
>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Cucumis sativus] gi|449531697|ref|XP_004172822.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Cucumis sativus]
Length = 473
Score = 484 bits (1246), Expect(2) = e-154
Identities = 235/355 (66%), Positives = 288/355 (81%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFSV+NAK+S+VQAL+VVPTRELGMQVTKVARMLAAK E
Sbjct: 118 AQTGSGKTLTYLLLIFSVINAKKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLN 177
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
S VMALLDGG LRRHK+WLK +PP I++AT+ SLCQM+++Q L+L + VLVIDEVDF+
Sbjct: 178 SYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFM 237
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
F+ +NRQTIFASASIPQHR F++DCIQQKWT++ VVH+H+N
Sbjct: 238 FSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLHDCIQQKWTKSTVVHIHINST 297
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
+PMPSCL HRFV C K +++ TLL LL +D PQSAIIFV EQSEKSKKAG PPTTL+I+
Sbjct: 298 QPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMID 357
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLK S+ GC +++LLEED+N+N RA+SL++++Q G YL+VATDI ARG+DLPETTHIYNF
Sbjct: 358 FLKASYGGCSDVILLEEDVNYNLRASSLSELRQGGSYLIVATDIVARGIDLPETTHIYNF 417
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLP+ A +YLHRAGRTGRKPFS+ KC VT++IT+EERFVLQ+FENEL F CEE++
Sbjct: 418 DLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVV 472
Score = 89.4 bits (220), Expect(2) = e-154
Identities = 42/74 (56%), Positives = 55/74 (74%)
Frame = +3
Query: 72 SLPISASLSSTCVGESDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEAL 251
S P+ A LSS+ + +V + STLRE+C GHVP+H+LRR EE+G++ PT VQ +AL
Sbjct: 48 SRPLQALLSSSSL--KNVAESNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQRQAL 105
Query: 252 PVLFSGRDCVIQAQ 293
PVLFSGRDCV+ AQ
Sbjct: 106 PVLFSGRDCVLHAQ 119
>ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arabidopsis lyrata subsp.
lyrata] gi|297317709|gb|EFH48131.1| hypothetical protein
ARALYDRAFT_488806 [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 493 bits (1268), Expect(2) = e-153
Identities = 243/355 (68%), Positives = 289/355 (81%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLIFS++N +RSSVQA++VVPTRELGMQVTKVARMLAAKS E + +
Sbjct: 121 AQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKS---EIDVK 177
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
CTVMALLDGGTLRRHKSWLK EPPAI++AT+ SLC ML+K LD ++VLV+DEVDFL
Sbjct: 178 GCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRLDSVKVLVVDEVDFL 237
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
F + RQT+FASASIPQH+ F++DCIQQKWT+ DVVHVHV+ +
Sbjct: 238 FYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAI 297
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
PMP CL HRFV+C K ++ L LL+SDAP+SAIIFVGEQSEKSKKAGN P TTLL+E
Sbjct: 298 MPMPLCLLHRFVMCEKTNKHQVLRALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLME 357
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLKTS++G E++LLE DMNFN RAASLT+++Q GG+LLV+TDIAARG+DLPETTHI+NF
Sbjct: 358 FLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNF 417
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLP+ T+YLHRAGR GRKPFSD KC V ++ITAEERFVLQR+ENEL F CEEL+
Sbjct: 418 DLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITAEERFVLQRYENELMFSCEELM 472
Score = 78.6 bits (192), Expect(2) = e-153
Identities = 41/96 (42%), Positives = 54/96 (56%)
Frame = +3
Query: 6 PSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGESDVGTTKNTCSTLRELCQGHVPD 185
PSF T +N + +L A SS S T TLR++CQG VP+
Sbjct: 30 PSFFHSTSTSRALKTSSNSRIINLQAVAETSSEIESNS---ATDTAALTLRKICQGFVPE 86
Query: 186 HVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
H+L R EE+G+I PT +Q EALP LF+GRDC++ AQ
Sbjct: 87 HILHRMEEIGFISPTDIQREALPTLFTGRDCILHAQ 122
>ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|217074248|gb|ACJ85484.1| unknown [Medicago truncatula]
gi|355511449|gb|AES92591.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
gi|388507084|gb|AFK41608.1| unknown [Medicago truncatula]
Length = 480
Score = 487 bits (1254), Expect(2) = e-151
Identities = 235/355 (66%), Positives = 289/355 (81%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTLAYLLLI+S+++ ++SS QALV+VPTRELGMQVTKVAR+LAAK +E EQ+
Sbjct: 125 AQTGSGKTLAYLLLIYSIISTRKSSFQALVLVPTRELGMQVTKVARILAAKPTGVEGEQR 184
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SCT+MALLDGGTLRRHKSW K EPPAIV+AT+ SLCQML++Q +L +RVLV+DEVDF+
Sbjct: 185 SCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGNLRVLVVDEVDFI 244
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIPQH +F+ + +QQKWT+ DV+H+HV+PV
Sbjct: 245 FNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNQFLNEAVQQKWTKRDVIHIHVSPV 304
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPS L HRF++C + + TLL L+QSDAP+S IIFV EQSEKSKKAGN+P T+L+I+
Sbjct: 305 EPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPSTSLVID 364
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLKTS+ G +++LLE+DMNFN RAASL +V++ GGYLLVATD+AARGVD PE THIYN+
Sbjct: 365 FLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNY 424
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLPK A +YLHRAGRT RKPFSD C VTSII ++ERFVLQR+ENEL F C EL+
Sbjct: 425 DLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELSFVCTELI 479
Score = 76.6 bits (187), Expect(2) = e-151
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = +3
Query: 150 TLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
TLR+LCQ HVPD +L+R EEVGY++PT VQ +ALP LFSGRDC++ AQ
Sbjct: 79 TLRQLCQSHVPDQLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQ 126
>ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Glycine max]
Length = 472
Score = 480 bits (1235), Expect(2) = e-151
Identities = 236/355 (66%), Positives = 286/355 (80%)
Frame = +2
Query: 284 SSAGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQ 463
+ GSGKTL YLLLI S++NA +SSVQALV+VPTRELGMQVTKVAR LAAK ++ EQ+
Sbjct: 117 AQTGSGKTLTYLLLIHSIINAAKSSVQALVLVPTRELGMQVTKVARTLAAKPTGVDGEQK 176
Query: 464 SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQTLNLDRMRVLVIDEVDFL 643
SC++MALLDGGTL+RHK+WLK EPP IV+AT+ SLCQML++ +L+ +RVL++DEVD +
Sbjct: 177 SCSIMALLDGGTLKRHKTWLKAEPPTIVVATVGSLCQMLERHFFSLETVRVLIVDEVDCI 236
Query: 644 FNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPV 823
FN NNRQT+FASASIPQH RF++D +QQKWT+ DVVH+HV+ V
Sbjct: 237 FNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFIHDSVQQKWTKRDVVHIHVSAV 296
Query: 824 EPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIE 1003
EPMPS LYHRFVIC + + TLL L+QSDAP+S IIFV EQSEKSKKAG AP T+LLI+
Sbjct: 297 EPMPSRLYHRFVICDTKRKLHTLLSLIQSDAPESGIIFVAEQSEKSKKAGKAPSTSLLID 356
Query: 1004 FLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNF 1183
FLKTS++G +++LLE+ MNFN RAASL +V++ GGYLLVATDIAARG DLPE +HIYNF
Sbjct: 357 FLKTSYQGDLDILLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAARGFDLPEMSHIYNF 416
Query: 1184 DLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFVLQRFENELQFQCEELL 1348
DLP+ A +YLHRAGRT RKPFSD C VTSII +ERFVLQR+ENEL F CEEL+
Sbjct: 417 DLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENELMFNCEELV 471
Score = 84.0 bits (206), Expect(2) = e-151
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = +3
Query: 24 NCTVPLPFNRTNRMLDSLPISASLSS--TCVGESDVGTTKNTCSTLRELCQGHVPDHVLR 197
NC + +N + S + L + + S + ++ T TLRELCQ HVP+H+L+
Sbjct: 27 NCYILRSYNHFLKHFSSSTTNLKLGTPQAILNTSPIAPSEVTTPTLRELCQSHVPEHILQ 86
Query: 198 RAEEVGYILPTHVQHEALPVLFSGRDCVIQAQ 293
R EE+GY++PT +Q EALP LFSG DC++ AQ
Sbjct: 87 RMEEIGYVMPTDIQREALPYLFSGLDCILHAQ 118