BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00020450
         (361 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...    86   5e-15
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]        74   3e-11
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    74   3e-11
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]      73   5e-11
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indi...    70   3e-10
ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group] g...    70   3e-10
ref|XP_006645333.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...    67   2e-09
gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays]         66   4e-09
gb|ACG29979.1| hypothetical protein [Zea mays]                         66   4e-09
ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea ma...    66   4e-09
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...    65   7e-09
ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08

>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           AYQHVF+SFF EGRHSEAKDLLYKCPHHIR+HPA+C LFGS+
Sbjct: 583 AYQHVFQSFFAEGRHSEAKDLLYKCPHHIRQHPAICGLFGSS 624


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 35/42 (83%), Positives = 40/42 (95%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           AYQHVF+SFF EGRHSEAKDLLYKCP+HIR+HPA+C LFGS+
Sbjct: 583 AYQHVFQSFFAEGRHSEAKDLLYKCPYHIRQHPAICGLFGSS 624


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           AY HVF+SFF EGR SEAKDLLYKCPHHIRKHP +C LFGSA
Sbjct: 581 AYVHVFESFFQEGRESEAKDLLYKCPHHIRKHPDICKLFGSA 622


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           AY H+F SFF+EGR+SEAKDLL+KCPHHIRKH  VC LFGSA
Sbjct: 574 AYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSA 615


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLF 243
           +Y+HVF +F +E RHSEAKDLL++CPHH+RKHPAVCSLF
Sbjct: 585 SYRHVFGAFLNENRHSEAKDLLFRCPHHVRKHPAVCSLF 623


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           AY +VF+SFF  GRHSEAKDLL+KCPHHIRKHP +  LFGSA
Sbjct: 579 AYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKISELFGSA 620


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY H+F+SFF EGRHSEAKDLL+KCPHHIRKH  +  LFGS
Sbjct: 580 AYFHIFESFFREGRHSEAKDLLFKCPHHIRKHRDIAKLFGS 620


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/41 (80%), Positives = 34/41 (82%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HVFKSFF EGRHSEAKDLLYKCPHHIRK   V  LFG+
Sbjct: 580 AYVHVFKSFFKEGRHSEAKDLLYKCPHHIRKLGEVRKLFGA 620


>gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indica Group]
          Length = 573

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HVFKSFF EGR+SEA+DLLYKCP HIRKHP V  LF S
Sbjct: 524 AYLHVFKSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFES 564


>ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group]
           gi|15289974|dbj|BAB63669.1| pentatricopeptide (PPR)
           repeat-containing protein -like [Oryza sativa Japonica
           Group] gi|113535061|dbj|BAF07444.1| Os01g0970900 [Oryza
           sativa Japonica Group] gi|125573469|gb|EAZ14984.1|
           hypothetical protein OsJ_04919 [Oryza sativa Japonica
           Group] gi|215678751|dbj|BAG95188.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215693250|dbj|BAG88632.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 573

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HVFKSFF EGR+SEA+DLLYKCP HIRKHP V  LF S
Sbjct: 524 AYLHVFKSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFES 564


>ref|XP_006645333.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Oryza brachyantha]
          Length = 562

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HVF+SFF EGR+SEA+DLLYKCP HIRKHP V  LF S
Sbjct: 515 AYLHVFESFFTEGRYSEAQDLLYKCPIHIRKHPDVTKLFES 555


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Citrus sinensis]
          Length = 639

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           AY  VF+SFF+EGRH EAKDLLYKCPHHIR+   +  LFGSA
Sbjct: 582 AYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSA 623


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
           gi|557542189|gb|ESR53167.1| hypothetical protein
           CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           AY  VF+SFF+EGRH EAKDLLYKCPHHIR+   +  LFGSA
Sbjct: 582 AYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSA 623


>gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays]
          Length = 598

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HV K FF EGR+SEA+DLLY CP+HIRKHP V  LFGS
Sbjct: 542 AYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKHPDVIKLFGS 582


>gb|ACG29979.1| hypothetical protein [Zea mays]
          Length = 577

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HV K FF EGR+SEA+DLLY CP+HIRKHP V  LFGS
Sbjct: 521 AYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKHPDVIKLFGS 561


>ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea mays]
           gi|194694094|gb|ACF81131.1| unknown [Zea mays]
          Length = 502

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HV K FF EGR+SEA+DLLY CP+HIRKHP V  LFGS
Sbjct: 446 AYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKHPDVIKLFGS 486


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY HVFKSFF EGR SEAK+LLYKCP+HIRK   +  LFGS
Sbjct: 598 AYVHVFKSFFKEGRDSEAKELLYKCPYHIRKLGEISKLFGS 638


>ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Setaria italica]
          Length = 562

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = -3

Query: 356 YQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           Y HV KSFF EGR+SEA+DLLYKCP HIRKHP V  LF S
Sbjct: 516 YLHVLKSFFAEGRYSEAQDLLYKCPIHIRKHPHVTKLFES 555


>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 641

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = -3

Query: 356 YQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGSA 234
           Y  +FKS F+EGR SEAKDLLYKCP HIRKH  +  LFGS+
Sbjct: 584 YLKIFKSLFEEGRLSEAKDLLYKCPPHIRKHSQISELFGSS 624


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -3

Query: 359 AYQHVFKSFFDEGRHSEAKDLLYKCPHHIRKHPAVCSLFGS 237
           AY H+FKSFF EGR+SEA+DLLYKCP HIR+H  +  LF S
Sbjct: 538 AYLHMFKSFFAEGRYSEAQDLLYKCPIHIRRHHDITKLFES 578